Review
Cell Biology
Wjdan S. Bafleh, Haia M. R. Abdulsamad, Sally M. Al-Qaraghuli, Riwa Y. El Khatib, Rawdah Taha Elbahrawi, Azhar Mohamud Abdukadir, Shaima M. Alsawae, Zakia Dimassi, Hamdan Hamdan, Junaid Kashir
Summary: The recent COVID-19 pandemic has brought about significant changes in various fields, including society, law, economics, science, and medicine. The use of mRNA-based vaccines has been approved for the first time by drug regulatory authorities to combat the outbreak. While this represents a novel application of mRNA technology in vaccination medicine, the introduction of RNA into cells to produce molecules is not a new concept. It has been commonly practiced in research to manipulate oocytes and embryos and has potential therapeutic and diagnostic applications in combating infertility. This article describes the potential clinical applications, advantages, and limitations of mRNA-based platforms, and discusses how recent advances driven by the pandemic can benefit infertility treatment. Future directions for enhancing RNA therapeutics in reproductive biology, specifically in oocyte and embryo delivery, are also presented.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
(2023)
Article
Pharmacology & Pharmacy
Lauren A. Bertocci, Jeffrey R. Rovatti, Alex Wu, Amber Morey, Diptiman D. Bose, Shannon R. M. Kinney
Summary: Calcium signaling and DNA methylation are connected in tumor development, potentially regulating apoptosis in cancer.
EUROPEAN JOURNAL OF PHARMACOLOGY
(2022)
Article
Endocrinology & Metabolism
Mingru Yin, Weina Yu, Wenzhi Li, Qianqian Zhu, Hui Long, Pengcheng Kong, Qifeng Lyu
Summary: The study found that AOA treatment affects the pre- and post-implantation embryo development in mice, resulting in increased expression of the maternal allele-specific gene Igf2r but significantly lower birth weight in newborn mice. However, no other abnormalities were observed in the offspring born following AOA treatment.
REPRODUCTIVE BIOLOGY AND ENDOCRINOLOGY
(2021)
Article
Biochemistry & Molecular Biology
Jordana S. Lopes, Elena Ivanova, Salvador Ruiz, Simon Andrews, Gavin Kelsey, Pilar Coy
Summary: Controlled ovarian stimulation is necessary in assisted reproductive procedures, but it may have consequences on gametes and offspring. In this study using the bovine model, DNA methylation profiles of oocytes from unstimulated and stimulated follicles were compared. The results showed differences in methylation levels of imprinted genes between the two groups, which may contribute to understanding syndromes in assisted reproductive technologies-derived offspring.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Cell Biology
Virginia Savy, Paula Stein, Min Shi, Carmen J. Williams
Summary: The study found that while there were subtle differences in calcium signaling in eggs following superovulation during parthenogenetic activation, there was no impact on the physiological calcium signaling at fertilization. This suggests that superovulation does not disrupt normal calcium signaling during fertilization, supporting its use for both clinical and experimental purposes.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
(2021)
Article
Obstetrics & Gynecology
Marga Esbert, Andrew Carmody, Agustin Ballesteros, Emre Seli, Richard T. Scott
Summary: This study found that activation and cleavage can occur in unfertilized oocytes after failure to fertilize. However, exposure to Ca.I A23187 does not increase the prevalence of activation. These embryos arrest before reaching the blastocyst stage and have no reproductive potential.
REPRODUCTIVE BIOMEDICINE ONLINE
(2022)
Article
Developmental Biology
Anna Storey, Khalil Elgmati, Yisu Wang, Paul Knaggs, Karl Swann
Summary: The study revealed that mouse eggs are about 10 times more sensitive to InsP(3) than human eggs, and have consistently higher ATP levels. As a result, mouse eggs can undergo Ca2+ oscillations in response to Sr2+ stimulation, while human eggs may be unresponsive due to lower cytosolic ATP levels.
MOLECULAR HUMAN REPRODUCTION
(2021)
Article
Biochemistry & Molecular Biology
Artem Nurislamov, Timofey Lagunov, Maria Gridina, Alla Krasikova, Veniamin Fishman
Summary: DNA methylation is an important epigenetic mechanism involved in various genomic processes. This study investigated DNA methylation patterns in chicken diplotene oocytes and found that they closely resemble the genomic distribution observed in somatic tissues.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Biochemistry & Molecular Biology
Christian Faltus, Angelika Lahnsteiner, Myrto Barrdahl, Yassen Assenov, Anika Huesing, Olga Bogatyrova, Marina Laplana, Theron Johnson, Thomas Muley, Michael Meister, Arne Warth, Michael Thomas, Christoph Plass, Rudolf Kaaks, Angela Risch
Summary: This study investigates the cellular effects of differentially methylated positions (DMPs) identified in an epigenome-wide association study (EWAS) on lung cancer risk. The hypomethylation of NHLRC1, a putative regulatory gene, is found to be associated with decreased survival rates in lung cancer patients. Further experiments reveal that hypomethylation in this region leads to increased mRNA transcription of NHLRC1 and attenuated proliferation, viability, migration, and invasion in lung cancer cells. This study demonstrates the potential of using EWAS DNA methylation data to discover functional mechanisms in oncogenesis and suggests that NHLRC1 could be a promising biomarker and target for lung cancer treatment.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Medicine, Research & Experimental
Juan Ramon Tejedor, Clara Bueno, Meritxell Vinyoles, Paolo Petazzi, Antonio Agraz-Doblas, Isabel Cobo, Raul Torres-Ruiz, Gustavo F. Bayon, Raul F. Perez, Sara Lopez-Tamargo, Francisco Gutierrez-Aguera, Pablo Santamarina-Ojeda, Manuel Ramirez-Orellana, Michela Bardini, Giovanni Cazzaniga, Paola Ballerini, Pauline Schneider, Ronald W. Stam, Ignacio Varela, Mario F. Fraga, Agustin F. Fernandez, Pablo Menendez
Summary: B cell acute lymphoblastic leukemia (B-ALL) is the most common childhood cancer, with infant B-ALL (iB-ALL) showing unique DNA mutational landscape and potential epigenetic mechanisms contributing to leukemogenesis. Integrated analysis of methylome and transcriptome data from MLLr and non-MLLr iB-ALL patients revealed chromatin state alterations and identified distinct gene expression patterns, particularly related to the AP-1 complex and RUNX factors in MLLr iB-ALL. Pharmacological inhibition of AP-1 showed promising potential in impairing MLLr-leukemic growth, suggesting a novel therapeutic approach for MLLr-iB-ALL.
JOURNAL OF CLINICAL INVESTIGATION
(2021)
Article
Reproductive Biology
Atieh Hajarizadeh, Akram Eidi, Ehsan Arefian, Eva Tvrda, Abdollah Mohammadi-Sangcheshmeh
Summary: Aflatoxin B1 (AFB1) negatively affects the development of sheep oocytes and embryonic development, leading to decreased meiotic and cytoplasmic maturation, increased intracellular reactive oxygen species (ROS) production, decreased mitochondrial membrane potential, and altered gene expression related to apoptosis and DNA methylation.
Article
Genetics & Heredity
Fabian A. Diaz, Emilio J. Gutierrez-Castillo, Brittany A. Foster, Paige T. Hardin, Kenneth R. Bondioli, Zongliang Jiang
Summary: The study found that heat stress negatively affects oocyte quality, transcriptomic profiles, and DNA methylation. During the transition from spring to summer, fewer high-quality oocytes were obtained in the summer season compared to the spring season. RNA sequencing revealed differential gene expression in GV and MII oocytes due to heat stress, with five common genes significantly affected in both types of oocytes. Pathways related to glucocorticoid biosynthesis, apoptosis signaling, Oct4 pluripotency, and Wnt/beta-catenin signaling were influenced by heat stress. Additionally, there was no significant difference in DNA methylation levels between spring and summer oocytes.
FRONTIERS IN GENETICS
(2021)
Review
Obstetrics & Gynecology
Bei Sun, John Yeh
Summary: This paper reviews the effects of calcium oscillatory patterns in oocytes and early embryo development, suggesting that abnormal calcium oscillations may be the primary mechanism for total fertilization failure (TFF). Studies also found strong associations between abnormal calcium oscillatory patterns and suboptimal developmental outcomes. Empirical use of artificial oocyte activation (AOA) methods has shown initial success in helping TFF patients.
REPRODUCTIVE SCIENCES
(2021)
Article
Cell Biology
Haixia Chen, Peng Li, Xiaoling Du, Yiding Zhao, Lingling Wang, Ye Tian, Xueru Song, Ling Shuai, Xiaohong Bai, Lingyi Chen
Summary: Mutation in the SEPTIN12 gene is associated with male infertility. Male mice with Septin12 knockout are infertile and have abnormal sperm, but fertility can be restored with artificial oocyte activation. Loss of PLC zeta might be the reason for failed fertilization in Septin12-deficient sperm.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
(2022)
Article
Multidisciplinary Sciences
Sheersh Massey, Mohammad Aasif Khan, Safia Obaidur Rab, Saad Mustafa, Asifa Khan, Zoya Malik, Rahimunnisa Shaik, Mohit Kumar Verma, S. V. S. Deo, Syed Akhtar Husain
Summary: This study investigates the role of the MEN1 gene in breast cancer and finds that aberrant expression of MEN1 is associated with the development and progression of the disease.
Review
Cell Biology
Junaid Kashir, Ayesha Rahman Ambia, Areez Shafqat, Muhammad Raihan Sajid, Khaled AlKattan, Ahmed Yaqinuddin
Summary: This article discusses the potential occurrence of vaccine-induced thrombotic thrombocytopenia (VITT) through inflammatory reactions and the overproduction of NETs by neutrophils, with similar autoimmune mechanisms observed in HIT.
JOURNAL OF LEUKOCYTE BIOLOGY
(2022)
Review
Medicine, General & Internal
Ahmed Yaqinuddin, Muhammad Faisal Ikram, Ayesha Rahman Ambia, Raghad Alaujan, Junaid Kashir
Summary: Alzheimer's disease is a common cause of dementia characterized by cognitive decline and memory impairment due to neurodegenerative processes. Models such as animal and 3D culture models have provided significant insights into the disease pathogenesis and potential therapeutics.
JOURNAL OF HEALTH AND ALLIED SCIENCES NU
(2022)
Article
Genetics & Heredity
Serdar Coskun, Sateesh Maddirevula, Khalid Awartani, Meshael Aldeery, Wafa Qubbaj, Junaid Kashir, Fowzan S. Alkuraya
Summary: This study investigates two cases of recurrent spontaneous oocyte activation (SOA) to identify the underlying causes and potential treatments. The results show that there is no clear genetic or pathological factor causing SOA in these patients. Further research is needed to fully understand the molecular mechanisms of oocyte activation and calcium dynamics that contribute to recurrent SOA.
JOURNAL OF ASSISTED REPRODUCTION AND GENETICS
(2022)
Review
Medicine, General & Internal
Wael Alkattan, Ahmed Yaqinuddin, Areez Shafqat, Junaid Kashir
Summary: Some COVID-19 patients may suffer from multi-organ failure, including liver injury. The mechanism behind this remains unclear, but it seems that neutrophil extracellular traps (NETs) may play a major role in liver injury in severe COVID-19 infection. Further research is needed to better understand the role of NETs in COVID-19.
JOURNAL OF HEALTH AND ALLIED SCIENCES NU
(2022)
Correction
Medicine, General & Internal
Amna Shoaib Siddiqui, Faizah A. Alshehri, Ahmed Yaqinuddin
JOURNAL OF HEALTH AND ALLIED SCIENCES NU
(2022)
Review
Immunology
Areez Shafqat, Tarek Z. Arabi, Belal N. Sabbah, Humzah S. Abdulkader, Shameel Shafqat, Adhil Razak, Junaid Kashir, Khaled Alkattan, Ahmed Yaqinuddin
Summary: The COVID-19 virus has mutated significantly, giving rise to variants of concern (VOCs) that are more transmissible and with increased ability to evade antibody responses. While COVID-19 vaccines may have reduced efficacy in preventing infection, they still offer protection against severe cases, likely due to the role of T-cell responses in maintaining immunity. Understanding T-cell responses is crucial for informing public health policies and future vaccine development.
Article
Cell Biology
Saeed Al Mahri, Meshail Okla, Mamoon Rashid, Shuja Shafi Malik, Jahangir Iqbal, Maria Al Ibrahim, Ghida Dairi, Amer Mahmood, Manikandan Muthurangan, Ahmed Yaqinuddin, Sameer Mohammad
Summary: G protein-coupled receptors (GPCRs) play important roles in adipose tissue, with their expression being influenced by adipocyte differentiation and obesity. In mouse adipose tissue, 292 and 271 GPCRs were detected in white and brown adipose tissue, respectively, with some GPCRs being specific to each tissue type. The expression of numerous GPCRs was also identified in subcutaneous adipose tissue from human subjects and was altered in obesity and high-fat diet conditions. These GPCRs could have significant implications for adipose metabolism and serve as valuable resources for obesity and metabolic research.
Article
Chemistry, Medicinal
Junaid Kashir, Bhavesh V. V. Mistry, Lujain BuSaleh, Michail Nomikos, Sarah Almuqayyil, Raed Abu-Dawud, Nadya AlYacoub, Hamdan Hamdan, Saad AlHassan, F. Anthony Lai, Abdullah M. M. Assiri, Serdar Coskun
Summary: The application of antigen unmasking/retrieval (AUM) enhances the visualization of PLC zeta in human sperm, allowing for accurate assessment of sperm fertilization capacity.
Review
Cell Biology
Wjdan S. Bafleh, Haia M. R. Abdulsamad, Sally M. Al-Qaraghuli, Riwa Y. El Khatib, Rawdah Taha Elbahrawi, Azhar Mohamud Abdukadir, Shaima M. Alsawae, Zakia Dimassi, Hamdan Hamdan, Junaid Kashir
Summary: The recent COVID-19 pandemic has brought about significant changes in various fields, including society, law, economics, science, and medicine. The use of mRNA-based vaccines has been approved for the first time by drug regulatory authorities to combat the outbreak. While this represents a novel application of mRNA technology in vaccination medicine, the introduction of RNA into cells to produce molecules is not a new concept. It has been commonly practiced in research to manipulate oocytes and embryos and has potential therapeutic and diagnostic applications in combating infertility. This article describes the potential clinical applications, advantages, and limitations of mRNA-based platforms, and discusses how recent advances driven by the pandemic can benefit infertility treatment. Future directions for enhancing RNA therapeutics in reproductive biology, specifically in oocyte and embryo delivery, are also presented.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
(2023)
Review
Chemistry, Medicinal
Haia M. R. Abdulsamad, Zoha F. F. Murtaza, Hessa M. M. AlMuhairi, Wjdan S. S. Bafleh, Salma A. A. AlMansoori, Shaikha A. A. AlQubaisi, Hamdan Hamdan, Junaid Kashir
Summary: Oocyte activation, driven by calcium oscillations mainly regulated by PLC zeta, is crucial for mammalian fertilization and embryogenesis. Failure of calcium release or defects in related mechanisms can lead to infertility in humans. Exploration of PLC zeta and its patterns in human sperm may offer potential for diagnosing and treating human fertility issues. This review provides a comprehensive update on the clinical associations between calcium release, PLC zeta, oocyte activation, and human fertility, discussing their implications in defective embryogenesis and infertility treatments.
Article
Biology
Raja Chinnappan, Tanveer Ahmad Mir, Sulaiman Alsalameh, Tariq Makhzoum, Salma Adeeb, Khaled Al-Kattan, Ahmed Yaqinuddin
Summary: Abnormal levels of ALT and AST in human serum are sensitive indicators of liver damage. Current methods for their detection are complex and unsuitable for point-of-care applications. Lateral flow assay-based biosensors offer a rapid, accurate, and affordable alternative, but antibody-based LFAs have limitations for field use. This study proposes the use of aptamers to develop a low-cost LFA device for the early detection and diagnosis of liver disease.
Review
Oncology
Raja Chinnappan, Tanveer Ahmad Mir, Sulaiman Alsalameh, Tariq Makhzoum, Alaa Alzhrani, Khalid Alnajjar, Salma Adeeb, Noor Al Eman, Zara Ahmed, Ismail Shakir, Khaled Al-Kattan, Ahmed Yaqinuddin
Summary: Lung cancer, causing more than 1.5 million deaths annually, is one of the most common types of cancer. Traditional diagnostic methods are not accurate and costly for early-stage prediction, making the development of a more accurate, low-cost, and rapid method crucial. Biosensors, developed using advanced technologies and nanomaterials, offer robustness, accuracy, cost-effectiveness, and ease of use. This review discusses various analytical methods for the development of biosensors for sensitive lung cancer biomarker diagnosis and addresses the challenges and prospects for their application in point-of-care testing.
Article
Medicine, General & Internal
Raja Chinnappan, Tanveer Ahmad Mir, Suliman Alsalameh, Tariq Makhzoum, Alaa Alzhrani, Khaled Al-Kattan, Ahmed Yaqinuddin
Summary: ALT and AST are important liver enzymes in clinical settings. Their levels can indicate liver diseases and drug-induced liver injury. However, traditional methods for analyzing ALT and AST levels are expensive and time-consuming, limiting their accessibility in developing countries. This study proposes the use of low-cost paper-based assays as a potential alternative method for the analysis of ALT and AST levels. This method has the potential to reduce economic burden and improve early detection and diagnosis of liver diseases.