Reciprocal Regulation of the Cardiac Epigenome by Chromatin Structural Proteins Hmgb and Ctcf

DNA Methylation Indicates Susceptibility to Isoproterenol-Induced Cardiac Pathology and Is Associated With Chromatin StatesNovelty and Significance

(2016) Haodong Chen et al.   CIRCULATION RESEARCH

Determinants of mammalian nucleolar architecture

(2015) Katherine I. Farley et al.   CHROMOSOMA

Chromatin decompaction by the nucleosomal binding protein HMGN5 impairs nuclear sturdiness

(2015) Takashi Furusawa et al.   Nature Communications

Role of DNA Methylation in Modulating Transcription Factor Occupancy

(2015) Matthew T. Maurano et al.   Cell Reports

Mapping Genetic Contributions to Cardiac Pathology Induced by Beta-Adrenergic Stimulation in MiceCLINICAL PERSPECTIVE

(2014) Christoph D. Rau et al.   Circulation-Cardiovascular Genetics

Genetic regulation of mouse liver metabolite levels

(2014) A. Ghazalpour et al.   Molecular Systems Biology

Mesenchymal–endothelial transition contributes to cardiac neovascularization

(2014) Eric Ubil et al.   NATURE

CTCF: an architectural protein bridging genome topology and function

(2014) Chin-Tong Ong et al.   NATURE REVIEWS GENETICS

Epigenetic regulation of canonical TNFα pathway by HDAC1 determines survival of cardiac myocytes

(2013) Hongying Gang et al.   AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY

Regulation of Chromatin Structure in the Cardiovascular System

(2013) Manuel Rosa-Garrido et al.   CIRCULATION JOURNAL

Genome-wide analysis of histone marks identifying an epigenetic signature of promoters and enhancers underlying cardiac hypertrophy

(2013) R. Papait et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Cohesin and CTCF differentially affect chromatin architecture and gene expression in human cells

(2013) J. Zuin et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Temporal Chromatin Signature in Human Embryonic Stem Cells Identifies Regulators of Cardiac Development

(2012) Sharon L. Paige et al.   CELL

Dynamic and Coordinated Epigenetic Regulation of Developmental Transitions in the Cardiac Lineage

(2012) Joseph A. Wamstad et al.   CELL

Waves of Retrotransposon Expansion Remodel Genome Organization and CTCF Binding in Multiple Mammalian Lineages

(2012) Dominic Schmidt et al.   CELL

Constitutive nuclear lamina-genome interactions are highly conserved and associated with A/T-rich sequence

(2012) W. Meuleman et al.   GENOME RESEARCH

Widespread plasticity in CTCF occupancy linked to DNA methylation

(2012) H. Wang et al.   GENOME RESEARCH

Features of endogenous cardiomyocyte chromatin revealed by super‐resolution STED microscopy

(2012) Scherise Mitchell-Jordan et al.   JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY

Quantitative Analysis of the Chromatin Proteome in Disease Reveals Remodeling Principles and Identifies High Mobility Group Protein B2 as a Regulator of Hypertrophic Growth

(2012) Sarah Franklin et al.   MOLECULAR & CELLULAR PROTEOMICS

Topological domains in mammalian genomes identified by analysis of chromatin interactions

(2012) Jesse R. Dixon et al.   NATURE

A Cell Cycle Role for the Epigenetic Factor CTCF-L/BORIS

(2012) Manuel Rosa-Garrido et al.   PLoS One

Loss of Maternal CTCF Is Associated with Peri-Implantation Lethality of Ctcf Null Embryos

(2012) James M. Moore et al.   PLoS One

LMNA cardiomyopathy: cell biology and genetics meet clinical medicine

(2011) J. T. Lu et al.   Disease Models & Mechanisms

The tumor suppressor role of CTCF

(2011) Francesco Paolo Fiorentino et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Proteomic profiling of the human T-cell nucleolus

(2011) Mohamed Ali Jarboui et al.   MOLECULAR IMMUNOLOGY

CTCF-mediated functional chromatin interactome in pluripotent cells

(2011) Lusy Handoko et al.   NATURE GENETICS

Co-occupancy by multiple cardiac transcription factors identifies transcriptional enhancers active in heart

(2011) A. He et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

MicroRNAs in cardiac disease

(2011) Gerald W. Dorn   Translational Research

Substantial Histone Reduction Modulates Genomewide Nucleosomal Occupancy and Global Transcriptional Output

(2011) Barbara Celona et al.   PLOS BIOLOGY

Mouse Genome-Wide Association and Systems Genetics Identify Asxl2 As a Regulator of Bone Mineral Density and Osteoclastogenesis

(2011) Charles R. Farber et al.   PLoS Genetics

Renal Failure Increases Cardiac Histone H3 Acetylation, Dimethylation, and Phosphorylation and the Induction of Cardiomyopathy-Related Genes in Type 2 Diabetes

(2010) Anil Bhanudas Gaikwad et al.   AMERICAN JOURNAL OF PATHOLOGY

Systematic Protein Location Mapping Reveals Five Principal Chromatin Types in Drosophila Cells

(2010) Guillaume J. Filion et al.   CELL

Genomic Profiling of HMGN1 Reveals an Association with Chromatin at Regulatory Regions

(2010) S. Cuddapah et al.   MOLECULAR AND CELLULAR BIOLOGY

Molecular Maps of the Reorganization of Genome-Nuclear Lamina Interactions during Differentiation

(2010) Daan Peric-Hupkes et al.   MOLECULAR CELL

Differential DNA Methylation Correlates with Differential Expression of Angiogenic Factors in Human Heart Failure

(2010) Mehregan Movassagh et al.   PLoS One

CTCF regulates the local epigenetic state of ribosomal DNA repeats

(2010) Suzanne van de Nobelen et al.   Epigenetics & Chromatin

Nucleosome Binding Properties and Co-Remodeling Activities of Native and in Vivo Acetylated HMGB-1 and HMGB-2 Proteins

(2009) Iva Ugrinova et al.   BIOCHEMISTRY

CTCF: Master Weaver of the Genome

(2009) Jennifer E. Phillips et al.   CELL

Structure and Epigenetics of Nucleoli in Comparison With Non-nucleolar Compartments

(2009) Eva Bártová et al.   JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY

Mechanism of DNA flexibility enhancement by HMGB proteins

(2009) Jingyun Zhang et al.   NUCLEIC ACIDS RESEARCH

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

(2009) E. Lieberman-Aiden et al.   SCIENCE

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains

(2008) S. Cuddapah et al.   GENOME RESEARCH

The Interaction of HMGB1 and Linker Histones Occurs Through their Acidic and Basic Tails

(2008) Laura Cato et al.   JOURNAL OF MOLECULAR BIOLOGY

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

(2008) Lars Guelen et al.   NATURE

Model-based Analysis of ChIP-Seq (MACS)

(2008) Yong Zhang et al.   GENOME BIOLOGY