标题
Transcriptome-wide mapping reveals a diverse dihydrouridine landscape including mRNA
作者
关键词
Messenger RNA, Small nucleolar RNA, Transfer RNA, RNA sequencing, RNA structure, Small nuclear RNA, Yeast, Nucleotides
出版物
PLOS BIOLOGY
Volume 20, Issue 5, Pages e3001622
出版商
Public Library of Science (PLoS)
发表日期
2022-05-25
DOI
10.1371/journal.pbio.3001622
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Pseudouridinylation of mRNA coding sequences alters translation
- (2019) Daniel E. Eyler et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Positive-sense RNA viruses reveal the complexity and dynamics of the cellular and viral epitranscriptomes during infection
- (2018) Will McIntyre et al. NUCLEIC ACIDS RESEARCH
- BBMerge – Accurate paired shotgun read merging via overlap
- (2017) Brian Bushnell et al. PLoS One
- Decoding the RNA structurome
- (2016) Zhipeng Lu et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- DMS-MaPseq for genome-wide or targeted RNA structure probing in vivo
- (2016) Meghan Zubradt et al. NATURE METHODS
- Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma
- (2016) NEW ENGLAND JOURNAL OF MEDICINE
- Efficient and quantitative high-throughput tRNA sequencing
- (2015) Guanqun Zheng et al. NATURE METHODS
- ARM-seq: AlkB-facilitated RNA methylation sequencing reveals a complex landscape of modified tRNA fragments
- (2015) Aaron E Cozen et al. NATURE METHODS
- Selective 2′-hydroxyl acylation analyzed by primer extension and mutational profiling (SHAPE-MaP) for direct, versatile and accurate RNA structure analysis
- (2015) Matthew J Smola et al. Nature Protocols
- Contribution of dihydrouridine in folding of the D-arm in tRNA
- (2015) N. Dyubankova et al. ORGANIC & BIOMOLECULAR CHEMISTRY
- The role of RNA conformation in RNA-protein recognition
- (2015) Efrat Kligun et al. RNA Biology
- The RNA structurome: transcriptome-wide structure probing with next-generation sequencing
- (2015) Chun Kit Kwok et al. TRENDS IN BIOCHEMICAL SCIENCES
- The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs
- (2015) Benedikt M. Beckmann et al. Nature Communications
- Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo
- (2013) Silvi Rouskin et al. NATURE
- Global analysis of yeast mRNPs
- (2012) Sarah F Mitchell et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Fluorescent labeling of tRNA dihydrouridine residues: Mechanism and distribution
- (2011) J. Kaur et al. RNA
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- MochiView: versatile software for genome browsing and DNA motif analysis
- (2010) Oliver R Homann et al. BMC BIOLOGY
- Synthesis and functional activity of tRNAs labeled with fluorescent hydrazides in the D-loop
- (2009) D. Pan et al. RNA
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started