A world of sequences: can we use georeferenced nucleotide databases for a robust automated phylogeography?

Knowledge-driven geospatial location resolution for phylogeographic models of virus migration

(2015) Davy Weissenbacher et al.   BIOINFORMATICS

Evolutionary processes driving spatial patterns of intraspecific genetic diversity in river ecosystems

(2015) I. Paz-Vinas et al.   MOLECULAR ECOLOGY

Standardizing metadata and taxonomic identification in metabarcoding studies

(2015) Leho Tedersoo et al.   GigaScience

Dispersal Capacity Predicts Both Population Genetic Structure and Species Richness in Reef Fishes

(2014) Cynthia Riginos et al.   AMERICAN NATURALIST

Improving ITS sequence data for identification of plant pathogenic fungi

(2014) R. Henrik Nilsson et al.   FUNGAL DIVERSITY

Inferring human population size and separation history from multiple genome sequences

(2014) Stephan Schiffels et al.   NATURE GENETICS

Phylogeography: spanning the ecology-evolution continuum

(2013) Katharine Ann Marske et al.   ECOGRAPHY

Natural experiments and meta-analyses in comparative phylogeography

(2013) Michael N Dawson   JOURNAL OF BIOGEOGRAPHY

Global patterns of terrestrial vertebrate diversity and conservation

(2013) C. N. Jenkins et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Putting GenBank Data on the Map

(2013) A. C. Marques et al.   SCIENCE

A decadal view of biodiversity informatics: challenges and priorities

(2013) Alex Hardisty et al.   BMC ECOLOGY

Comparative phylogeography of African savannah ungulates1

(2012) E. D. LORENZEN et al.   MOLECULAR ECOLOGY

The International Nucleotide Sequence Database Collaboration

(2012) Y. Nakamura et al.   NUCLEIC ACIDS RESEARCH

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Effects of geography and life history traits on genetic differentiation in benthic marine fishes

(2011) Cynthia Riginos et al.   ECOGRAPHY

Targeted Amplicon Sequencing (TAS): A Scalable Next-Gen Approach to Multilocus, Multitaxa Phylogenetics

(2011) Seth M. Bybee et al.   Genome Biology and Evolution

Enhancing phylogeography by improving geographical information from GenBank

(2011) Matthew Scotch et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Tidying Up International Nucleotide Sequence Databases: Ecological, Geographical and Sequence Quality Annotation of ITS Sequences of Mycorrhizal Fungi

(2011) Leho Tedersoo et al.   PLoS One

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Applications of next generation sequencing in molecular ecology of non-model organisms

(2010) R Ekblom et al.   HEREDITY

Of glaciers and refugia: a decade of study sheds new light on the phylogeography of northwestern North America

(2010) AARON B. A. SHAFER et al.   MOLECULAR ECOLOGY

Accessible Reproducible Research

(2010) J. P. Mesirov   SCIENCE

Phylogeography’s past, present, and future: 10 years after Avise, 2000

(2009) M.J. Hickerson et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Identification and dynamics of a cryptic suture zone in tropical rainforest

(2009) C Moritz et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Stability Predicts Genetic Diversity in the Brazilian Atlantic Forest Hotspot

(2009) A. C. Carnaval et al.   SCIENCE

Mining metadata from unidentified ITS sequences in GenBank: A case study in Inocybe (Basidiomycota)

(2008) Martin Ryberg et al.   BMC EVOLUTIONARY BIOLOGY

Working together to put molecules on the map

(2008) Dawn Field   NATURE

A place for everything

(2008)   NATURE

DNA DATA: Proposal to 'Wikify' GenBank Meets Stiff Resistance

(2008) E. Pennisi   SCIENCE

Comparative phylogeography as an integrative approach to historical biogeography

(2003) Brian S. Arbogast et al.   JOURNAL OF BIOGEOGRAPHY