标题
Microbial oxidation of atmospheric trace gases
作者
关键词
-
出版物
NATURE REVIEWS MICROBIOLOGY
Volume -, Issue -, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2022-04-13
DOI
10.1038/s41579-022-00724-x
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Out of Thin Air? Astrobiology and Atmospheric Chemotrophy
- (2022) Don A. Cowan et al. ASTROBIOLOGY
- Phylogenetically and functionally diverse microorganisms reside under the Ross Ice Shelf
- (2022) Clara Martínez-Pérez et al. Nature Communications
- Trace gas oxidizers are widespread and active members of soil microbial communities
- (2021) Sean K. Bay et al. Nature Microbiology
- Simultaneous Oxidation of Atmospheric Methane, Carbon Monoxide and Hydrogen for Bacterial Growth
- (2021) Alexander Tøsdal Tveit et al. Microorganisms
- Hazardous gases sustain microbes underfoot
- (2021) Paul Carini Nature Microbiology
- Bark-dwelling methanotrophic bacteria decrease methane emissions from trees
- (2021) Luke C. Jeffrey et al. Nature Communications
- Deciphering the oxygen activation mechanism at the CuC site of particulate methane monooxygenase
- (2021) Wei Peng et al. Nature Catalysis
- Chemosynthetic and photosynthetic bacteria contribute differentially to primary production across a steep desert aridity gradient
- (2021) Sean K. Bay et al. ISME Journal
- Copper Centers in the Cryo-EM Structure of Particulate Methane Monooxygenase Reveal the Catalytic Machinery of Methane Oxidation
- (2021) W.-H. Chang et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Coordination of the Copper Centers in Particulate Methane Monooxygenase: Comparison between Methanotrophs and Characterization of the CuC Site by EPR and ENDOR Spectroscopies
- (2021) Richard J. Jodts et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Termite gas emissions select for hydrogenotrophic microbial communities in termite mounds
- (2021) Eleonora Chiri et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Hydrogen is a major lifeline for aerobic bacteria
- (2021) Chris Greening et al. TRENDS IN MICROBIOLOGY
- Multiple energy sources and metabolic strategies sustain microbial diversity in Antarctic desert soils
- (2021) Maximiliano Ortiz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome-resolved metagenomics reveals how soil bacterial communities respond to elevated H2 availability
- (2021) Yongfeng Xu et al. SOIL BIOLOGY & BIOCHEMISTRY
- Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean
- (2021) Marta Royo-Llonch et al. Nature Microbiology
- The thermoacidophilic methanotroph Methylacidiphilum fumariolicum SolV oxidizes subatmospheric H2 with a high-affinity, membrane-associated [NiFe] hydrogenase
- (2020) Rob A. Schmitz et al. ISME Journal
- Molecular Hydrogen Metabolism: a Widespread Trait of Pathogenic Bacteria and Protists
- (2020) Stéphane L. Benoit et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Hydrogen utilization by Methylocystis sp. strain SC2 expands the known metabolic versatility of type IIa methanotrophs
- (2020) Anna Hakobyan et al. METABOLIC ENGINEERING
- The Energetics of Hydrogen Molecule Oxidation in NiFe-hydrogenase
- (2020) Per E. M. Siegbahn et al. ACS Catalysis
- Laboratory studies on the viability of life in H2-dominated exoplanet atmospheres
- (2020) S. Seager et al. Nature Astronomy
- A widely distributed hydrogenase oxidises atmospheric H2 during bacterial growth
- (2020) Zahra F. Islam et al. ISME Journal
- Soil Microbiomes With the Genetic Capacity for Atmospheric Chemosynthesis Are Widespread Across the Poles and Are Associated With Moisture, Carbon, and Nitrogen Limitation
- (2020) Angelique E. Ray et al. Frontiers in Microbiology
- Acidobacteria are active and abundant members of diverse atmospheric H2-oxidizing communities detected in temperate soils
- (2020) Andrew T. Giguere et al. ISME Journal
- Hydrogen-Oxidizing Bacteria Are Abundant in Desert Soils and Strongly Stimulated by Hydration
- (2020) Karen Jordaan et al. mSystems
- Bacterial fermentation and respiration processes are uncoupled in anoxic permeable sediments
- (2019) Adam J. Kessler et al. Nature Microbiology
- Two Chloroflexi classes independently evolved the ability to persist on atmospheric hydrogen and carbon monoxide
- (2019) Zahra F. Islam et al. ISME Journal
- Widespread soil bacterium that oxidizes atmospheric methane
- (2019) Alexander T. Tveit et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Particulate methane monooxygenase contains only mononuclear copper centers
- (2019) Matthew O. Ross et al. SCIENCE
- Mediterranean grassland soil C–N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms
- (2019) Spencer Diamond et al. Nature Microbiology
- Atmospheric carbon monoxide oxidation is a widespread mechanism supporting microbial survival
- (2019) Paul R. F. Cordero et al. ISME Journal
- Two uptake hydrogenases differentially interact with the aerobic respiratory chain during mycobacterial growth and persistence
- (2019) Paul R. F. Cordero et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Putative Iron-Sulfur Proteins Are Required for Hydrogen Consumption and Enhance Survival of Mycobacteria
- (2019) Zahra F. Islam et al. Frontiers in Microbiology
- The oxidation-reduction and electrocatalytic properties of CO dehydrogenase from Oligotropha carboxidovorans
- (2019) Palraj Kalimuthu et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Unravelling the Identity, Metabolic Potential and Global Biogeography of the Atmospheric Methane-Oxidizing Upland Soil Cluster α
- (2018) Jennifer Pratscher et al. ENVIRONMENTAL MICROBIOLOGY
- Microbial cycling of isoprene, the most abundantly produced biological volatile organic compound on Earth
- (2018) Terry J. McGenity et al. ISME Journal
- Methanotrophy across a natural permafrost thaw environment
- (2018) Caitlin M Singleton et al. ISME Journal
- Revisiting the catalytic mechanism of Mo–Cu carbon monoxide dehydrogenase using QM/MM and DFT calculations
- (2018) Kai Xu et al. PHYSICAL CHEMISTRY CHEMICAL PHYSICS
- Tracking the route of molecular oxygen in O2-tolerant membrane-bound [NiFe] hydrogenase
- (2018) Jacqueline Kalms et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Meta-omics survey of [NiFe]-hydrogenase genes fails to capture drastic variations in H2-oxidation activity measured in three soils exposed to H2
- (2018) Mondher Khdhiri et al. SOIL BIOLOGY & BIOCHEMISTRY
- Evolutionary History of Copper Membrane Monooxygenases
- (2018) Roshan Khadka et al. Frontiers in Microbiology
- Gene probing reveals the widespread distribution, diversity and abundance of isoprene-degrading bacteria in the environment
- (2018) Ornella Carrión et al. Microbiome
- Comparative proteomics reveals signature metabolisms of exponentially growing and stationary phase marine bacteria
- (2017) Saraladevi Muthusamy et al. ENVIRONMENTAL MICROBIOLOGY
- Mixotrophy drives niche expansion of verrucomicrobial methanotrophs
- (2017) Carlo R Carere et al. ISME Journal
- Atmospheric trace gases support primary production in Antarctic desert surface soil
- (2017) Mukan Ji et al. NATURE
- Structural basis of the redox switches in the NAD+-reducing soluble [NiFe]-hydrogenase
- (2017) Y. Shomura et al. SCIENCE
- Perchlorate-Coupled Carbon Monoxide (CO) Oxidation: Evidence for a Plausible Microbe-Mediated Reaction in Martian Brines
- (2017) Marisa R. Myers et al. Frontiers in Microbiology
- Editorial: The Impact of Microorganisms on Consumption of Atmospheric Trace Gases
- (2017) Steffen Kolb et al. Frontiers in Microbiology
- A radical rebound mechanism for the methane oxidation reaction promoted by the dicopper center of a pMMO enzyme: a computational perspective
- (2016) Júlio C. S. Da Silva et al. DALTON TRANSACTIONS
- Detection and isolation of plant-associated bacteria scavenging atmospheric molecular hydrogen
- (2016) Manabu Kanno et al. ENVIRONMENTAL MICROBIOLOGY
- Atmospheric H2 fuels plant-microbe interactions
- (2016) Chris Greening et al. ENVIRONMENTAL MICROBIOLOGY
- Isolation of isoprene degrading bacteria from soils, development of isoA gene probes and identification of the active isoprene-degrading soil community using DNA-stable isotope probing
- (2016) Myriam El Khawand et al. ENVIRONMENTAL MICROBIOLOGY
- Isolation and characterization of Acidobacterium ailaaui sp. nov., a novel member of Acidobacteria subdivision 1, from a geothermally heated Hawaiian microbial mat
- (2016) INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Methylacidiphilum fumariolicum SolV, a thermoacidophilic ‘Knallgas’ methanotroph with both an oxygen-sensitive and -insensitive hydrogenase
- (2016) Sepehr Mohammadi et al. ISME Journal
- Probing the metabolic water contribution to intracellular water using oxygen isotope ratios of PO4
- (2016) Hui Li et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Structure of an Actinobacterial-Type [NiFe]-Hydrogenase Reveals Insight into O 2 -Tolerant H 2 Oxidation
- (2016) Caspar Schäfer et al. STRUCTURE
- Conventional methanotrophs are responsible for atmospheric methane oxidation in paddy soils
- (2016) Yuanfeng Cai et al. Nature Communications
- Enzymatic Oxidation of Methane
- (2015) Sarah Sirajuddin et al. BIOCHEMISTRY
- Genomic and metagenomic surveys of hydrogenase distribution indicate H2 is a widely utilised energy source for microbial growth and survival
- (2015) Chris Greening et al. ISME Journal
- Hydrogens detected by subatomic resolution protein crystallography in a [NiFe] hydrogenase
- (2015) Hideaki Ogata et al. NATURE
- Seasonal fluxes of carbonyl sulfide in a midlatitude forest
- (2015) Róisín Commane et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Persistence of the dominant soil phylumAcidobacteriaby trace gas scavenging
- (2015) Chris Greening et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Carbon monoxide as a metabolic energy source for extremely halophilic microbes: Implications for microbial activity in Mars regolith
- (2015) Gary M. King PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Soil carbon content and relative abundance of high affinity H2-oxidizing bacteria predict atmospheric H2 soil uptake activity better than soil microbial community composition
- (2015) Mondher Khdhiri et al. SOIL BIOLOGY & BIOCHEMISTRY
- Breathing air to save energy - new insights into the ecophysiological role of high-affinity [NiFe]-hydrogenase in Streptomyces avermitilis
- (2015) Quentin Liot et al. MicrobiologyOpen
- Bacteria and fungi associated with isoprene consumption in soil
- (2015) Christopher M. Gray et al. Elementa-Science of the Anthropocene
- Hydrogenases
- (2014) Wolfgang Lubitz et al. CHEMICAL REVIEWS
- Atmospheric methane oxidizers are present and active in Canadian high Arctic soils
- (2014) Christine Martineau et al. FEMS MICROBIOLOGY ECOLOGY
- Thermomicrobium carboxidum sp. nov., and Thermorudis peleae gen. nov., sp. nov., carbon monoxide-oxidizing bacteria isolated from geothermally heated biofilms
- (2014) C. E. King et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Description of Thermogemmatispora carboxidivorans sp. nov., a carbon-monoxide-oxidizing member of the class Ktedonobacteria isolated from a geothermally heated biofilm, and analysis of carbon monoxide oxidation by members of the class Ktedonobacteria
- (2014) C. E. King et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Effects of Zinc on Particulate Methane Monooxygenase Activity and Structure
- (2014) Sarah Sirajuddin et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Mutagenesis of the hydrocarbon monooxygenase indicates a metal centre in subunit-C, and not subunit-B, is essential for copper-containing membrane monooxygenase activity
- (2014) E. F. Liew et al. MICROBIOLOGY-SGM
- The Growth and Survival of Mycobacterium smegmatis Is Enhanced by Co-Metabolism of Atmospheric H2
- (2014) Chris Greening et al. PLoS One
- A soil actinobacterium scavenges atmospheric H2 using two membrane-associated, oxygen-dependent [NiFe] hydrogenases
- (2014) C. Greening et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- An obligately aerobic soil bacterium activates fermentative hydrogen production to survive reductive stress during hypoxia
- (2014) M. Berney et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Growth of nitrite-oxidizing bacteria by aerobic hydrogen oxidation
- (2014) H. Koch et al. SCIENCE
- In Vitro and In Vivo Studies of a Rapid and Selective Breath Test for Tuberculosis Based upon Mycobacterial CO Dehydrogenase
- (2014) M. Maiga et al. mBio
- Probing the diversity of chloromethane-degrading bacteria by comparative genomics and isotopic fractionation
- (2014) Thierry Nadalig et al. Frontiers in Microbiology
- Metagenomic evidence for metabolism of trace atmospheric gases by high-elevation desert Actinobacteria
- (2014) Ryan C. Lynch et al. Frontiers in Microbiology
- Novel, Oxygen-Insensitive Group 5 [NiFe]-Hydrogenase in Ralstonia eutropha
- (2013) Caspar Schäfer et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- [NiFe] hydrogenases: A common active site for hydrogen metabolism under diverse conditions
- (2013) Hannah S. Shafaat et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Microbiota-Derived Hydrogen Fuels Salmonella Typhimurium Invasion of the Gut Ecosystem
- (2013) Lisa Maier et al. Cell Host & Microbe
- Three different [NiFe] hydrogenases confer metabolic flexibility in the obligate aerobeMycobacterium smegmatis
- (2013) Michael Berney et al. ENVIRONMENTAL MICROBIOLOGY
- Three decades of global methane sources and sinks
- (2013) Stefanie Kirschke et al. Nature Geoscience
- Active microorganisms in soil: Critical review of estimation criteria and approaches
- (2013) Evgenia Blagodatskaya et al. SOIL BIOLOGY & BIOCHEMISTRY
- Consumption of atmospheric hydrogen during the life cycle of soil-dwelling actinobacteria
- (2013) Laura K. Meredith et al. Environmental Microbiology Reports
- Physiological and Metabolic Effects of Carbon Monoxide Oxidation in the Model Marine Bacterioplankton Ruegeria pomeroyi DSS-3
- (2012) Michael Cunliffe APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Proteomic Analysis of Survival of Rhodococcus jostii RHA1 during Carbon Starvation
- (2012) Marianna A. Patrauchan et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Mechanistic insight into the blocking of CO diffusion in [NiFe]-hydrogenase mutants through multiscale simulation
- (2012) P.-h. Wang et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evidence for hydrogen oxidation and metabolic plasticity in widespread deep-sea sulfur-oxidizing bacteria
- (2012) K. Anantharaman et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Genome Data Mining and Soil Survey for the Novel Group 5 [NiFe]-Hydrogenase To Explore the Diversity and Ecological Importance of Presumptive High-Affinity H2-Oxidizing Bacteria
- (2011) Philippe Constant et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- HYDROGEN GREENHOUSE PLANETS BEYOND THE HABITABLE ZONE
- (2011) Raymond Pierrehumbert et al. Astrophysical Journal Letters
- Crystal Structure and Characterization of Particulate Methane Monooxygenase fromMethylocystisspecies Strain M
- (2011) Stephen M. Smith et al. BIOCHEMISTRY
- Assimilation of acetate by the putative atmospheric methane oxidizers belonging to the USCα clade
- (2011) Jennifer Pratscher et al. ENVIRONMENTAL MICROBIOLOGY
- Hydrogen, metals, bifurcating electrons, and proton gradients: The early evolution of biological energy conservation
- (2011) William F. Martin FEBS LETTERS
- Proteomic insights into the lifestyle of an environmentally relevant marine bacterium
- (2011) Joseph Alexander Christie-Oleza et al. ISME Journal
- Photobiogeochemical cycling of carbon monoxide in the southeastern Beaufort Sea in spring and autumn
- (2011) Huixiang Xie et al. LIMNOLOGY AND OCEANOGRAPHY
- The crystal structure of an oxygen-tolerant hydrogenase uncovers a novel iron-sulphur centre
- (2011) Johannes Fritsch et al. NATURE
- Structural basis for a [4Fe-3S] cluster in the oxygen-tolerant membrane-bound [NiFe]-hydrogenase
- (2011) Yasuhito Shomura et al. NATURE
- Microbial seed banks: the ecological and evolutionary implications of dormancy
- (2011) Jay T. Lennon et al. NATURE REVIEWS MICROBIOLOGY
- Co-localization of atmospheric H2 oxidation activity and high affinity H2-oxidizing bacteria in non-axenic soil and sterile soil amended with Streptomyces sp. PCB7
- (2011) Philippe Constant et al. SOIL BIOLOGY & BIOCHEMISTRY
- Detection of a Reproducible, Single-Member Shift in Soil Bacterial Communities Exposed to Low Levels of Hydrogen
- (2010) C. A. Osborne et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Correlating carbon monoxide oxidation with cox genes in the abundant Marine Roseobacter Clade
- (2010) Michael Cunliffe ISME Journal
- Molecular analysis of high-affinity methane-oxidizing enrichment cultures isolated from a forest biocenosis and agrocenoses
- (2010) I. K. Kravchenko et al. MICROBIOLOGY
- Oxidation of methane by a biological dicopper centre
- (2010) Ramakrishnan Balasubramanian et al. NATURE
- Unique Flexibility in Energy Metabolism Allows Mycobacteria to Combat Starvation and Hypoxia
- (2010) Michael Berney et al. PLoS One
- Distribution Analysis of Hydrogenases in Surface Waters of Marine and Freshwater Environments
- (2010) Martin Barz et al. PLoS One
- Shifts in metabolic scaling, production, and efficiency across major evolutionary transitions of life
- (2010) J. P. DeLong et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Dormancy contributes to the maintenance of microbial diversity
- (2010) S. E. Jones et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Characterization of marine isoprene-degrading communities
- (2009) Laura Acuña Alvarez et al. ENVIRONMENTAL MICROBIOLOGY
- Streptomycetes contributing to atmospheric molecular hydrogen soil uptake are widespread and encode a putative high-affinity [NiFe]-hydrogenase
- (2009) Philippe Constant et al. ENVIRONMENTAL MICROBIOLOGY
- Introduction of Methionines in the Gas Channel Makes [NiFe] Hydrogenase Aero-Tolerant
- (2009) Sébastien Dementin et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Relating diffusion along the substrate tunnel and oxygen sensitivity in hydrogenase
- (2009) Pierre-Pol Liebgott et al. Nature Chemical Biology
- Effect of hydrogen on soil bacterial community structure in two soils as determined by terminal restriction fragment length polymorphism
- (2009) Ye Zhang et al. PLANT AND SOIL
- Complete Genome Sequence of the Aerobic CO-Oxidizing Thermophile Thermomicrobium roseum
- (2009) Dongying Wu et al. PLoS One
- The tropospheric cycle of H2: a critical review
- (2009) D. H. Ehhalt et al. TELLUS SERIES B-CHEMICAL AND PHYSICAL METEOROLOGY
- Controlled Oxidation of Hydrocarbons by the Membrane-Bound Methane Monooxygenase: The Case for a Tricopper Cluster
- (2008) Sunney I. Chan et al. ACCOUNTS OF CHEMICAL RESEARCH
- Mycobacterium tuberculosis Senses Host-Derived Carbon Monoxide during Macrophage Infection
- (2008) Michael U. Shiloh et al. Cell Host & Microbe
- Isolation of Streptomyces sp. PCB7, the first microorganism demonstrating high-affinity uptake of tropospheric H2
- (2008) Philippe Constant et al. ISME Journal
- Degradation of ambient carbonyl sulfide by Mycobacterium spp. in soil
- (2008) H. Kato et al. MICROBIOLOGY-SGM
- Bacterial carbon processing by generalist species in the coastal ocean
- (2008) Xiaozhen Mou et al. NATURE
- Two isozymes of particulate methane monooxygenase with different methane oxidation kinetics are found in Methylocystis sp. strain SC2
- (2008) M. Baani et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Experimental approaches to kinetics of gas diffusion in hydrogenase
- (2008) F. Leroux et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Extraction and characterization of soil hydrogenases oxidizing atmospheric hydrogen
- (2008) Rongbo Guo et al. SOIL BIOLOGY & BIOCHEMISTRY
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now