Evaluation of a Rapid and Accessible Reverse Transcription-Quantitative PCR Approach for SARS-CoV-2 Variant of Concern Identification

Considerable escape of SARS-CoV-2 Omicron to antibody neutralization

(2022) Delphine Planas et al.   NATURE

Two-step strategy for the identification of SARS-CoV-2 variant of concern 202012/01 and other variants with spike deletion H69–V70, France, August to December 2020

(2021) Antonin Bal et al.   Eurosurveillance

Reduced neutralization of SARS-CoV-2 B.1.1.7 variant by convalescent and vaccine sera

(2021) Piyada Supasa et al.   CELL

SARS-CoV-2 variant B.1.1.7 is susceptible to neutralizing antibodies elicited by ancestral spike vaccines

(2021) Xiaoying Shen et al.   Cell Host & Microbe

Emergence of a Novel SARS-CoV-2 Variant in Southern California

(2021) Wenjuan Zhang et al.   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Sensitivity of SARS-CoV-2 B.1.1.7 to mRNA vaccine-elicited antibodies

(2021) Dami A. Collier et al.   NATURE

Estimated transmissibility and impact of SARS-CoV-2 lineage B.1.1.7 in England

(2021) Nicholas G. Davies et al.   SCIENCE

Neutralization of SARS-CoV-2 lineage B.1.1.7 pseudovirus by BNT162b2 vaccine–elicited human sera

(2021) Alexander Muik et al.   SCIENCE

SARS-CoV-2 variants B.1.351 and P.1 escape from neutralizing antibodies

(2021) Markus Hoffmann et al.   CELL

Increased resistance of SARS-CoV-2 variant P.1 to antibody neutralization

(2021) Pengfei Wang et al.   Cell Host & Microbe

Identification of a SARS-CoV-2 Variant with L452R and E484Q Neutralization Resistance Mutations

(2021) Michelle Verghese et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Vaccines and SARS-CoV-2 variants: the urgent need for a correlate of protection

(2021) Salim S Abdool Karim   LANCET

Genomic characteristics and clinical effect of the emergent SARS-CoV-2 B.1.1.7 lineage in London, UK: a whole-genome sequencing and hospital-based cohort study

(2021) Dan Frampton et al.   LANCET INFECTIOUS DISEASES

Multiplex qPCR discriminates variants of concern to enhance global surveillance of SARS-CoV-2

(2021) Chantal B. F. Vogels et al.   PLOS BIOLOGY

Reduced neutralization of SARS-CoV-2 B.1.617 by vaccine and convalescent serum

(2021) Chang Liu et al.   CELL

Neutralizing Antibodies Against Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variants Induced by Natural Infection or Vaccination: A Systematic Review and Pooled Analysis

(2021) Xinhua Chen et al.   CLINICAL INFECTIOUS DISEASES

Multiplex SARS-CoV-2 Genotyping Reverse Transcriptase PCR for Population-Level Variant Screening and Epidemiologic Surveillance

(2021) Hannah Wang et al.   JOURNAL OF CLINICAL MICROBIOLOGY

A Simple Reverse Transcriptase PCR Melting-Temperature Assay To Rapidly Screen for Widely Circulating SARS-CoV-2 Variants

(2021) Padmapriya Banada et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Specific allelic discrimination of N501Y and other SARS‐CoV‐2 mutations by ddPCR detects B.1.1.7 lineage in Washington State

(2021) Garrett A. Perchetti et al.   JOURNAL OF MEDICAL VIROLOGY

High‐resolution melting curve FRET‐PCR rapidly identifies SARS‐CoV‐2 mutations

(2021) Subarna Barua et al.   JOURNAL OF MEDICAL VIROLOGY

Reduced sensitivity of SARS-CoV-2 variant Delta to antibody neutralization

(2021) Delphine Planas et al.   NATURE

BNT162b2-elicited neutralization of B.1.617 and other SARS-CoV-2 variants

(2021) Jianying Liu et al.   NATURE

The biological and clinical significance of emerging SARS-CoV-2 variants

(2021) Kaiming Tao et al.   NATURE REVIEWS GENETICS

Highly sensitive and specific detection of the SARS-CoV-2 Delta variant by double-mismatch allele-specific real time reverse transcription PCR

(2021) Jeremy A. Garson et al.   JOURNAL OF CLINICAL VIROLOGY

Sequence analysis of the emerging SARS‐CoV‐2 variant Omicron in South Africa

(2021) Lulan Wang et al.   JOURNAL OF MEDICAL VIROLOGY

Molecular detection of SARS‐CoV‐2 strains and differentiation of Delta variant strains

(2021) Vaughn Hamill et al.   Transboundary and Emerging Diseases

Development of a Multiplex Tandem PCR (MT-PCR) Assay for the Detection of Emerging SARS-CoV-2 Variants

(2021) Richard Hale et al.   Viruses-Basel

Surveillance of SARS-CoV-2 lineage B.1.1.7 in Slovakia using a novel, multiplexed RT-qPCR assay

(2021) Kristína Boršová et al.   Scientific Reports

SARS-CoV-2 Variants Detection Using TaqMan SARS-CoV-2 Mutation Panel Molecular Genotyping Assays

(2021) Puja Neopane et al.   Infection and Drug Resistance

On the evolutionary epidemiology of SARS-CoV-2

(2020) Troy Day et al.   CURRENT BIOLOGY

Nextstrain: real-time tracking of pathogen evolution

(2018) James Hadfield et al.   BIOINFORMATICS

STARD 2015: an updated list of essential items for reporting diagnostic accuracy studies

(2015) Patrick M Bossuyt et al.   BMJ-British Medical Journal

STARD 2015: an updated list of essential items for reporting diagnostic accuracy studies

(2015) Patrick M Bossuyt et al.   BMJ-British Medical Journal