Rapid detection and tracking of Omicron variant of SARS-CoV-2 using CRISPR-Cas12a-based assay

Two-step strategy for the identification of SARS-CoV-2 variant of concern 202012/01 and other variants with spike deletion H69–V70, France, August to December 2020

(2021) Antonin Bal et al.   Eurosurveillance

Mutation-Specific SARS-CoV-2 PCR Screen: Rapid and Accurate Detection of Variants of Concern and the Identification of a Newly Emerging Variant with Spike L452R Mutation

(2021) Huanyu Wang et al.   JOURNAL OF CLINICAL MICROBIOLOGY

SARS-CoV-2 variants, spike mutations and immune escape

(2021) William T. Harvey et al.   NATURE REVIEWS MICROBIOLOGY

Precision Response to the Rise of the SARS-CoV-2 B.1.1.7 Variant of Concern by Combining Novel PCR Assays and Genome Sequencing for Rapid Variant Detection and Surveillance

(2021) Nathan Zelyas et al.   Microbiology Spectrum

dsmCRISPR: Dual synthetic mismatches CRISPR/Cas12a-based detection of SARS-CoV-2 D614G mutation

(2021) Xiaoming Huang et al.   VIRUS RESEARCH

CRISPR-Cas12a-Based Detection for the Major SARS-CoV-2 Variants of Concern

(2021) Yuanhao Liang et al.   Microbiology Spectrum

A Novel Coronavirus from Patients with Pneumonia in China, 2019

(2020) Na Zhu et al.   NEW ENGLAND JOURNAL OF MEDICINE

Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities

(2020) Matteo Chiara et al.   BRIEFINGS IN BIOINFORMATICS

CRISPR-Cas12a target binding unleashes indiscriminate single-stranded DNase activity

(2018) Janice S. Chen et al.   SCIENCE

Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6

(2018) Jonathan S. Gootenberg et al.   SCIENCE

Cpf1 Is a Single RNA-Guided Endonuclease of a Class 2 CRISPR-Cas System

(2015) Bernd Zetsche et al.   CELL

Primer-BLAST: A tool to design target-specific primers for polymerase chain reaction

(2012) Jian Ye et al.   BMC BIOINFORMATICS