Phages rarely encode antibiotic resistance genes: a cautionary tale for virome analyses
出版年份 2016 全文链接
标题
Phages rarely encode antibiotic resistance genes: a cautionary tale for virome analyses
作者
关键词
-
出版物
ISME Journal
Volume 11, Issue 1, Pages 237-247
出版商
Springer Nature
发表日期
2016-06-23
DOI
10.1038/ismej.2016.90
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Complete genome sequence analysis and identification of putative metallo-beta-lactamase and SpoIIIE homologs in Bacillus cereus group phage BCP8-2, a new member of the proposed Bastille-like group
- (2015) Paul Tetteh Asare et al. ARCHIVES OF VIROLOGY
- Putative type 1 thymidylate synthase and dihydrofolate reductase as signature genes of a novel bastille-like group of phages in the subfamily Spounavirinae
- (2015) Paul Tetteh Asare et al. BMC GENOMICS
- The human gut resistome
- (2015) W. van Schaik PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Current perspectives on the dynamics of antibiotic resistance in different reservoirs
- (2015) Manuela Caniça et al. RESEARCH IN MICROBIOLOGY
- VirSorter: mining viral signal from microbial genomic data
- (2015) Simon Roux et al. PeerJ
- Comparative Genomics of Cluster O Mycobacteriophages
- (2015) Steven G. Cresawn et al. PLoS One
- Effects of Long Term Antibiotic Therapy on Human Oral and Fecal Viromes
- (2015) Shira R. Abeles et al. PLoS One
- The Novel Macrolide-Lincosamide-Streptogramin B Resistance Geneerm(44) Is Associated with a Prophage in Staphylococcus xylosus
- (2014) Juliette R. K. Wipf et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Characterization of a P1-Like Bacteriophage Carrying an SHV-2 Extended-Spectrum β-Lactamase from an Escherichia coli Strain
- (2014) Typhaine Billard-Pomares et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Modeling the Infection Dynamics of Bacteriophages in Enteric Escherichia coli: Estimating the Contribution of Transduction to Antimicrobial Gene Spread
- (2014) Victoriya V. Volkova et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Depth-stratified functional and taxonomic niche specialization in the ‘core’ and ‘flexible’ Pacific Ocean Virome
- (2014) Bonnie L Hurwitz et al. ISME Journal
- Improved annotation of antibiotic resistance determinants reveals microbial resistomes cluster by ecology
- (2014) Molly K Gibson et al. ISME Journal
- What is a resistance gene? Ranking risk in resistomes
- (2014) José L. Martínez et al. NATURE REVIEWS MICROBIOLOGY
- Sulfur Oxidation Genes in Diverse Deep-Sea Viruses
- (2014) K. Anantharaman et al. SCIENCE
- Bacteriophages as Vehicles for Antibiotic Resistance Genes in the Environment
- (2014) Jose Luis Balcazar PLoS Pathogens
- Ecology and evolution of viruses infecting uncultivated SUP05 bacteria as revealed by single-cell- and meta-genomics
- (2014) Simon Roux et al. eLife
- Nucleotide sequence of conjugative prophage Φ1207.3 (formerly Tn1207.3) carrying the mef(A)/msr(D) genes for efflux resistance to macrolides in Streptococcus pyogenes
- (2014) Francesco Iannelli et al. Frontiers in Microbiology
- Horizontal gene transfer in the human gastrointestinal tract: potential spread of antibiotic resistance genes
- (2014) Jennifer R Huddleston Infection and Drug Resistance
- Antibiotic Resistance Genes in the Bacteriophage DNA Fraction of Human Fecal Samples
- (2013) Pablo Quirós et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- The Comprehensive Antibiotic Resistance Database
- (2013) Andrew G. McArthur et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- ARG-ANNOT, a New Bioinformatic Tool To Discover Antibiotic Resistance Genes in Bacterial Genomes
- (2013) Sushim Kumar Gupta et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Antibiotic treatment expands the resistance reservoir and ecological network of the phage metagenome
- (2013) Sheetal R. Modi et al. NATURE
- Pediatric Fecal Microbiota Harbor Diverse and Novel Antibiotic Resistance Genes
- (2013) Aimée M. Moore et al. PLoS One
- Genome signature-based dissection of human gut metagenomes to extract subliminal viral sequences
- (2013) Lesley A. Ogilvie et al. Nature Communications
- Assessment of viral community functional potential from viral metagenomes may be hampered by contamination with cellular sequences
- (2013) S. Roux et al. Open Biology
- The human microbiome as a reservoir of antimicrobial resistance
- (2013) John Penders et al. Frontiers in Microbiology
- Metabolic reprogramming by viruses in the sunlit and dark ocean
- (2013) Bonnie L Hurwitz et al. GENOME BIOLOGY
- Identification of acquired antimicrobial resistance genes
- (2012) E. Zankari et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
- (2012) Christian Quast et al. NUCLEIC ACIDS RESEARCH
- Hypervariable loci in the human gut virome
- (2012) S. Minot et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Shared Antibiotic Resistome of Soil Bacteria and Human Pathogens
- (2012) K. J. Forsberg et al. SCIENCE
- Diversity and Abundance of Single-Stranded DNA Viruses in Human Feces
- (2011) Min-Soo Kim et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Characterization of novel antibiotic resistance genes identified by functional metagenomics on soil samples
- (2011) Gloria Torres-Cortés et al. ENVIRONMENTAL MICROBIOLOGY
- The human gut virome: Inter-individual variation and dynamic response to diet
- (2011) S. Minot et al. GENOME RESEARCH
- Bacteriophages as vehicles of the resistome in cystic fibrosis
- (2011) J. M. Rolain et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Bacteriophages and diffusion of genes encoding antimicrobial resistance in cystic fibrosis sputum microbiota
- (2011) L. Fancello et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Structural Analysis of a Putative Aminoglycoside N-Acetyltransferase from Bacillus anthracis
- (2011) Maria M. Klimecka et al. JOURNAL OF MOLECULAR BIOLOGY
- HMMER web server: interactive sequence similarity searching
- (2011) R. D. Finn et al. NUCLEIC ACIDS RESEARCH
- Antibiotics in Feed Induce Prophages in Swine Fecal Microbiomes
- (2011) H. K. Allen et al. mBio
- Identification of Diverse Antimicrobial Resistance Determinants Carried on Bacterial, Plasmid, or Viral Metagenomes from an Activated Sludge Microbial Assemblage
- (2010) L. C. Parsley et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Origins and Evolution of Antibiotic Resistance
- (2010) J. Davies et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
- Viruses in the faecal microbiota of monozygotic twins and their mothers
- (2010) Alejandro Reyes et al. NATURE
- A human gut microbial gene catalogue established by metagenomic sequencing
- (2010) Junjie Qin et al. NATURE
- Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow
- (2010) Rachel A. F. Wozniak et al. NATURE REVIEWS MICROBIOLOGY
- The phage-related chromosomal islands of Gram-positive bacteria
- (2010) Richard P. Novick et al. NATURE REVIEWS MICROBIOLOGY
- m46.1, the Main Streptococcus pyogenes Element Carrying mef(A) and tet(O) Genes
- (2009) A. Brenciani et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Tetracycline Resistome of the Organic Pig Gut
- (2009) K. A. Kazimierczak et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Metagenomic Analysis of Respiratory Tract DNA Viral Communities in Cystic Fibrosis and Non-Cystic Fibrosis Individuals
- (2009) Dana Willner et al. PLoS One
- Functional Characterization of the Antibiotic Resistance Reservoir in the Human Microflora
- (2009) M. O. A. Sommer et al. SCIENCE
- Metagenomic Screening for Bleomycin Resistance Genes
- (2008) T. Mori et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- MetaGeneAnnotator: Detecting Species-Specific Patterns of Ribosomal Binding Site for Precise Gene Prediction in Anonymous Prokaryotic and Phage Genomes
- (2008) H. Noguchi et al. DNA RESEARCH
- Functional metagenomics reveals diverse β-lactamases in a remote Alaskan soil
- (2008) Heather K Allen et al. ISME Journal
- ARDB--Antibiotic Resistance Genes Database
- (2008) B. Liu et al. NUCLEIC ACIDS RESEARCH
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now