Torn apart and reunited: impact of a heterotroph on the transcriptome of Prochlorococcus

Response of Prochlorococcus to varying CO2:O2 ratios

(2015) Sarah C Bagby et al.   ISME Journal

Phytoplankton–bacterial interactions mediate micronutrient colimitation at the coastal Antarctic sea ice edge

(2015) Erin M. Bertrand et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Inference of interactions in cyanobacterial–heterotrophic co-cultures via transcriptome sequencing

(2014) Alexander S Beliaev et al.   ISME Journal

Physiology and evolution of nitrate acquisition in Prochlorococcus

(2014) Paul M Berube et al.   ISME Journal

Comparative transcriptomics of two environmentally relevant cyanobacteria reveals unexpected transcriptome diversity

(2014) Karsten Voigt et al.   ISME Journal

Prochlorococcus: the structure and function of collective diversity

(2014) Steven J. Biller et al.   NATURE REVIEWS MICROBIOLOGY

Closely related phytoplankton species produce similar suites of dissolved organic matter

(2014) Jamie W. Becker et al.   Frontiers in Microbiology

Genomes of diverse isolates of the marine cyanobacterium Prochlorococcus

(2014) Steven J. Biller et al.   Scientific Data

The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases

(2013) Ron Caspi et al.   NUCLEIC ACIDS RESEARCH

Present and future global distributions of the marine Cyanobacteria Prochlorococcus and Synechococcus

(2013) P. Flombaum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mutualistic interactions between vitamin B12-dependent algae and heterotrophic bacteria exhibit regulation

(2012) Elena Kazamia et al.   ENVIRONMENTAL MICROBIOLOGY

NCBI GEO: archive for functional genomics data sets—update

(2012) Tanya Barrett et al.   NUCLEIC ACIDS RESEARCH

Transcriptome and Proteome Dynamics of a Light-Dark Synchronized Bacterial Cell Cycle

(2012) Jacob R. Waldbauer et al.   PLoS One

The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss

(2012) J. J. Morris et al.   mBio

Prochlorococcus and Synechococcus have Evolved Different Adaptive Mechanisms to Cope with Light and UV Stress

(2012) Daniella Mella-Flores et al.   Frontiers in Microbiology

Influence of vitamin B auxotrophy on nitrogen metabolism in eukaryotic phytoplankton

(2012) Erin M. Bertrand et al.   Frontiers in Microbiology

Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes

(2012) Georgia Giannoukos et al.   GENOME BIOLOGY

The Role of B Vitamins in Marine Biogeochemistry

(2011) Sergio A. Sañudo-Wilhelmy et al.   Annual Review of Marine Science

Transcriptome response of high- and low-light-adapted Prochlorococcus strains to changing iron availability

(2011) Anne W Thompson et al.   ISME Journal

Response of Prochlorococcus ecotypes to co-culture with diverse marine bacteria

(2011) Daniel Sher et al.   ISME Journal

Insights into the Evolution of Vitamin B12 Auxotrophy from Sequenced Algal Genomes

(2011) K. E. Helliwell et al.   MOLECULAR BIOLOGY AND EVOLUTION

Duplex-specific nuclease efficiently removes rRNA for prokaryotic RNA-seq

(2011) Hana Yi et al.   NUCLEIC ACIDS RESEARCH

Dependence of the Cyanobacterium Prochlorococcus on Hydrogen Peroxide Scavenging Microbes for Growth at the Ocean's Surface

(2011) J. Jeffrey Morris et al.   PLoS One

Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans

(2010) Rex R Malmstrom et al.   ISME Journal

Vitamin B12 excretion by cultures of the marine cyanobacteria Crocosphaera and Synechococcus

(2010) Sophie Bonnet et al.   LIMNOLOGY AND OCEANOGRAPHY

Atomic force microscopy reveals microscale networks and possible symbioses among pelagic marine bacteria

(2009) F Malfatti et al.   AQUATIC MICROBIAL ECOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology

(2009) P. D. Karp et al.   BRIEFINGS IN BIOINFORMATICS

Whole-genome microarray analyses ofSynechococcus-Vibriointeractions

(2009) Vera Tai et al.   ENVIRONMENTAL MICROBIOLOGY

Biochemical Evidence for a Timing Mechanism in Prochlorococcus

(2009) I. M. Axmann et al.   JOURNAL OF BACTERIOLOGY

Bacterial competition: surviving and thriving in the microbial jungle

(2009) Michael E. Hibbing et al.   NATURE REVIEWS MICROBIOLOGY

Choreography of the Transcriptome, Photophysiology, and Cell Cycle of a Minimal Photoautotroph, Prochlorococcus

(2009) Erik R. Zinser et al.   PLoS One

Facilitation of Robust Growth of Prochlorococcus Colonies and Dilute Liquid Cultures by "Helper" Heterotrophic Bacteria

(2008) J. J. Morris et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

The Challenge of Regulation in a Minimal Photoautotroph: Non-Coding RNAs in Prochlorococcus

(2008) Claudia Steglich et al.   PLoS Genetics