Characterization of the first cultured representative of Verrucomicrobia subdivision 5 indicates the proposal of a novel phylum

Expanding the World of Marine Bacterial and Archaeal Clades

(2016) Pelin Yilmaz et al.   Frontiers in Microbiology

Identification of sucrose synthase in nonphotosynthetic bacteria and characterization of the recombinant enzymes

(2015) Margo Diricks et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

High Diversity of Culturable Prokaryotes in a Lithifying Hypersaline Microbial Mat

(2015) Stefan Spring et al.   GEOMICROBIOLOGY JOURNAL

Gut biogeography of the bacterial microbiota

(2015) Gregory P. Donaldson et al.   NATURE REVIEWS MICROBIOLOGY

IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis: Figure 1.

(2015) Bhavjinder K. Dhillon et al.   NUCLEIC ACIDS RESEARCH

Characterization and comparison of the bacterial microbiota in different gastrointestinal tract compartments in horses

(2015) M.C. Costa et al.   VETERINARY JOURNAL

Planctomycetes do possess a peptidoglycan cell wall

(2015) Olga Jeske et al.   Nature Communications

Complete genome sequence and description of Salinispira pacifica gen. nov., sp. nov., a novel spirochaete isolated form a hypersaline microbial mat

(2015) Wajdi Ben Hania et al.   Standards in Genomic Sciences

Mucin glycan foraging in the human gut microbiome

(2015) Louise E. Tailford et al.   Frontiers in Genetics

Verrucomicrobia Are Candidates for Polysaccharide-Degrading Bacterioplankton in an Arctic Fjord of Svalbard

(2014) Z. Cardman et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Functional characterization of polysaccharide utilization loci in the marine Bacteroidetes ‘Gramella forsetii’ KT0803

(2014) Antje Kabisch et al.   ISME Journal

Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences

(2014) Pablo Yarza et al.   NATURE REVIEWS MICROBIOLOGY

The Candidate Phylum Poribacteria by Single-Cell Genomics: New Insights into Phylogeny, Cell-Compartmentation, Eukaryote-Like Repeat Proteins, and Other Genomic Features

(2014) Janine Kamke et al.   PLoS One

First genome sequences of Achromobacter phages reveal new members of the N4 family

(2014) Johannes Wittmann et al.   Virology Journal

Taxonomy and evolution of bacteriochlorophyll a-containing members of the OM60/NOR5 clade of marine gammaproteobacteria: description of Luminiphilus syltensis gen. nov., sp. nov., reclassification of Haliea rubra as Pseudohaliea rubra gen. nov., comb. nov., and emendation of Chromatocurvus halotolerans

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The carbohydrate-active enzymes database (CAZy) in 2013

(2013) Vincent Lombard et al.   NUCLEIC ACIDS RESEARCH

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

(2013) Ross Overbeek et al.   NUCLEIC ACIDS RESEARCH

The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks

(2013) Pelin Yilmaz et al.   NUCLEIC ACIDS RESEARCH

Phylogenetic Analysis of a Microbialite-Forming Microbial Mat from a Hypersaline Lake of the Kiritimati Atoll, Central Pacific

(2013) Dominik Schneider et al.   PLoS One

Three-Dimensional Reconstruction of Bacteria with a Complex Endomembrane System

(2013) Rachel Santarella-Mellwig et al.   PLOS BIOLOGY

Pyrosequencing of 16S rRNA genes in fecal samples reveals high diversity of hindgut microflora in horses and potential links to chronic laminitis

(2012) Samantha M Steelman et al.   BMC Veterinary Research

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

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Oligosphaera ethanolica gen. nov., sp. nov., an anaerobic, carbohydrate-fermenting bacterium isolated from methanogenic sludge, and description of Oligosphaeria classis nov. in the phylum Lentisphaerae

(2012) Y.-L. Qiu et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Expression of sulfatases in Rhodopirellula baltica and the diversity of sulfatases in the genus Rhodopirellula

(2012) Carl-Eric Wegner et al.   Marine Genomics

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia

(2012) Manuel Martinez-Garcia et al.   PLoS One

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

(2011) Daniel McDonald et al.   ISME Journal

Functional evolution of C4 pyruvate, orthophosphate dikinase

(2011) Chris J. Chastain et al.   JOURNAL OF EXPERIMENTAL BOTANY

The under-recognized dominance of Verrucomicrobia in soil bacterial communities

(2011) Gaddy T. Bergmann et al.   SOIL BIOLOGY & BIOCHEMISTRY

The ecological coherence of high bacterial taxonomic ranks

(2010) Laurent Philippot et al.   NATURE REVIEWS MICROBIOLOGY

The Waddlia Genome: A Window into Chlamydial Biology

(2010) Claire Bertelli et al.   PLoS One

The Genome Sequence ofMethanohalophilus mahiiSLPTReveals Differences in the Energy Metabolism among Members of theMethanosarcinaceaeInhabiting Freshwater and Saline Environments

(2010) Stefan Spring et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

IMG ER: a system for microbial genome annotation expert review and curation

(2009) Victor M. Markowitz et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Phytoplankton in the ocean use non-phosphorus lipids in response to phosphorus scarcity

(2009) Benjamin A. S. Van Mooy et al.   NATURE

Evolutionary primacy of sodium bioenergetics

(2008) Armen Y Mulkidjanian et al.   Biology Direct