Article
Infectious Diseases
Hai Viet Nguyen, Petra de Haas, Hoa Binh Nguyen, Nhung Viet Nguyen, Frank G. J. Cobelens, Veriko Mirtskhulava, Alyssa Finlay, Hung Van Nguyen, Pham T. T. Huyen, Edine W. Tiemersma
Summary: The performance of Xpert MTB/Rif in community-based TB screening shows high rates of discordance when compared with MGIT culture. Multiple diagnostic tests and/or multiple samples are required to achieve sufficient sensitivity in situations where the majority of TB cases are expected to have a low bacterial load.
BMC INFECTIOUS DISEASES
(2022)
Article
Infectious Diseases
Yanning Hu, Yue Zhu, Chen Li, Huihui Shi, Yulin Zhang, Jiankang Zhao, Yanyan Fan, Yongli Wu, Ziyao Li, Xinmeng Liu, Feilong Zhang, Binghuai Lu
Summary: A retrospective study was conducted to evaluate the performance of the BACTEC MGIT 960 system in recovering Nocardia from different clinical specimens, compared to smear microscopy and blood agar plate culture. The study also assessed the inhibitory effect of antibiotics in the MGIT 960 tube on Nocardia. The results showed that MGIT 960 had the highest sensitivity for Nocardia recovery (81.3%), and N. farcinica was the most detected species (60.4%, 136/225). The study concluded that the components and antibiotics of the MGIT 960 system need to be redesigned for better recovery of Nocardia strains.
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE
(2023)
Article
Microbiology
Hui-Jin Yu, Tae Yeul Kim, Gangmin Kim, Hyang Jin Shim, On Kyun Kang, Seungmo Kim, Chang-Ki Kim, Byung Woo Jhun, Nam Yong Lee, Hee Jae Huh, Hee Joo Lee
Summary: The World Health Organization has lowered the critical concentration for rifampin drug-susceptibility testing of Mycobacterium tuberculosis complex using the MGIT system. This study evaluated the diagnostic performance of the MGIT system with the revised critical concentration and found comparable results to the previous concentration.
JOURNAL OF CLINICAL MICROBIOLOGY
(2023)
Article
Infectious Diseases
Laniado-Laborin Rafael, Muniz-Salazar Raquel, Flores-Acosta Rogelio, Felix-Ponce Miroslava, Jimenez-Gracia Alejandra-Isabel, Ruiz-Tamayo Saritzia Paola
Summary: The research utilized DNA sequencing to analyze drug resistance in clinical isolates of tuberculosis, identifying discrepancies in test results and the presence of silent mutations in some strains. It was found that 13 isolates showed discordant results between different testing methods, with 7 isolates having silent mutations. The study suggests that all rifampin-resistant cases should undergo DNA sequencing for accurate diagnosis.
INFECTION GENETICS AND EVOLUTION
(2021)
Article
Microbiology
Akemi Oshiro Guirelli, Andreia Moreira dos Santos Carmo, Andre Eterovic, Lucilaine Ferrazoli, Vilma dos Santos Menezes Gaiotto Daros, Maria Cecilia Cergole-Novella
Summary: The study evaluated the performance of the OMNIgene SPUTUM reagent in maintaining viable specimens of Mycobacterium tuberculosis complex. The results showed a slight delay in bacterial growth compared to the standard protocol when the reagent was used without refrigeration.
BRAZILIAN JOURNAL OF MICROBIOLOGY
(2021)
Article
Infectious Diseases
Nguyen Kim Cuong, Dang Van Thanh, Dinh Van Luong, Nguyen Manh The, Truong Duc Thai, Anh Tran Thi Tuan, Doan Thu Ha, Vu Quoc Dat
Summary: This study retrospectively describes the histological characteristics in biopsy samples from the National Lung Hospital in Vietnam and finds a high proportion of features suggestive of tuberculosis. This supports the need for further evaluation of histological examination and its combination with other rapid molecular assays in suspected tuberculosis samples.
JOURNAL OF CLINICAL TUBERCULOSIS AND OTHER MYCOBACTERIAL DISEASES
(2023)
Article
Pharmacology & Pharmacy
Hang Yang, Jingjing Xu, Yujing Gong, Yan Tang, Wuyou Li, Zhenhua Zheng, Yuhong Li, Jin He, Hongping Wei
Summary: A novel internal cell-penetrating peptide was predicted in the chimeric lysin ClyR, allowing it to be internalized by epithelial cells through caveolin-dependent endocytosis for targeting intracellular pathogens. Specific residues in the internal CPP were found to be essential for ClyR-mediated internalization and intracellular killing, providing new insights into the rational designing of next-generation lysins.
INTERNATIONAL JOURNAL OF PHARMACEUTICS
(2021)
Article
Immunology
Fazal Mehmood Khan, Vijay Singh Gondil, Changchang Li, Mengwei Jiang, Junhua Li, Junping Yu, Hongping Wei, Hang Yang
Summary: The study isolated and characterized a bacteriophage p54 and its endolysin LysAB54 which showed significant bactericidal activity against multidrug-resistant Gram-negative superbugs including A. baumannii. This suggests that LysAB54 could potentially serve as a therapeutic agent for treating these bacteria.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY
(2021)
Article
Chemistry, Medicinal
Wenhao Dai, Dirk Jochmans, Hang Xie, Hang Yang, Jian Li, Haixia Su, Di Chang, Jiang Wang, Jingjing Peng, Lili Zhu, Yong Nian, Rolf Hilgenfeld, Hualiang Jiang, Kaixian Chen, Leike Zhang, Yechun Xu, Johan Neyts, Hong Liu
Summary: A series of peptidomimetic aldehydes were designed and synthesized to target 3C(pro) of EV71 and SARS-CoV-2. Compound 18p showed potent antiviral and enzyme inhibitory activity, as well as good pharmacokinetic properties.
JOURNAL OF MEDICINAL CHEMISTRY
(2022)
Article
Infectious Diseases
Xiaohong Li, Shujuan Wang, Raphael Nyaruaba, Huan Liu, Hang Yang, Hongping Wei
Summary: The chimeric lysin ClyC has Ca2+-enhanced bactericidal activity against all S. aureus strains, including MRSA. It shows high activity, significantly reduced effective concentration when combined with penicillin G, and improved survival rates in a mouse model of S. aureus bacteremia. ClyC is a promising candidate against S. aureus infections.
Article
Infectious Diseases
Elishiba Muturi, Wei Hong, Junhua Li, Wan Yang, Jin He, Hongping Wei, Hang Yang
Summary: The drug simeprevir has been predicted as a potential treatment for COVID-19, but experiments showed that it does not inhibit the replication of SARS-CoV-2 in vivo.
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS
(2022)
Article
Microbiology
Greater Kayode Oyejobi, Dongyan Xiong, Mengjuan Shi, Xiaoxu Zhang, Hang Yang, Heng Xue, Faith Ogolla, Hongping Wei
Summary: Bacteriophages have proven very useful as alternative therapeutic agents in combating multidrug-resistant bacterial infections; however, bacterial resistance to phages threatens their use. In this study, we showed a new strategy of leveraging genetic signatures that accompany phage resistance in bacteria to predict agents that can be used with lytic phages to combat multidrug-resistant Acinetobacter baumannii.
JOURNAL OF BACTERIOLOGY
(2022)
Article
Environmental Sciences
Wei Hong, Jin Xiong, Raphael Nyaruaba, Junhua Li, Elishiba Muturi, Huan Liu, Junping Yu, Hang Yang, Hongping Wei
Summary: The new SDS-PMA assisted RT-qPCR method can rapidly distinguish between live and dead SARS-CoV-2 viruses, aiding in better control of viral transmission.
SCIENCE OF THE TOTAL ENVIRONMENT
(2021)
Article
Microbiology
Elishiba Muturi, Fei Meng, Huan Liu, Mengwei Jiang, Hongping Wei, Hang Yang
Summary: The study found that functional PQSs in the ASFV genome, which can form stable G4s in the presence of K+ and be stabilized by G4 ligands such as NMM and PDS, could serve as potential targets for antiviral drugs. Experimental results showed that NMM and PDS can significantly suppress the expression of ASFV genes and inhibit the replication of ASFV in Porcine Alveolar Macrophages.
FRONTIERS IN MICROBIOLOGY
(2021)
Article
Chemistry, Medicinal
Changchang Li, Mengwei Jiang, Fazal Mehmood Khan, Xiaowei Zhao, Guanhua Wang, Wanli Zhou, Junhua Li, Junping Yu, Yuhong Li, Hongping Wei, Hang Yang
Summary: The new lysin LysP53 shows activity against multiple antibiotic-resistant Gram-negative bacteria and exhibits higher decolonization efficacy in an infection mouse model, suggesting its potential as a promising candidate for treating infections caused by Gram-negative pathogens.
ACS INFECTIOUS DISEASES
(2021)
Article
Multidisciplinary Sciences
Yang Yi, Junhua Li, Xinyuan Lai, Meng Zhang, Yi Kuang, Yang-Oujie Bao, Rong Yu, Wei Hong, Elishiba Muturi, Heng Xue, Hongping Wei, Tong Li, Hui Zhuang, Xue Qiao, Kuanhui Xiang, Hang Yang, Min Ye
Summary: This study discovered potential natural inhibitors of SARS-CoV-2 from licorice, a traditional Chinese herbal medicine. Two compounds, licorice-saponin A3 and glycyrrhetinic acid, were found to potently inhibit SARS-CoV-2 infection and could be promising candidates for antiviral drug development.
JOURNAL OF ADVANCED RESEARCH
(2022)
Article
Chemistry, Analytical
Raphael Nyaruaba, Wei Hong, Xiaohong Li, Hang Yang, Hongping Wei
Summary: Developing a stable and easily preserved inactivated whole-virus SARS-CoV-2 RNA reference standard is crucial for efficient diagnostic assays. This study introduces a method using silk fibroin matrices to preserve the RNA reference standard, which exhibited stability at room temperature for over 21 weeks and compatibility with RT-PCR reactions.
ANALYTICAL CHEMISTRY
(2022)
Review
Microbiology
Raphael Nyaruaba, Caroline Mwaliko, David Dobnik, Pavel Neuzil, Patrick Amoth, Matilu Mwau, Junping Yu, Hang Yang, Hongping Wei
Summary: The ongoing COVID-19 pandemic caused by SARS-CoV-2 has created a global public health crisis. While RT-qPCR is the current gold standard for diagnosis, dPCR has shown to be more effective in detecting low viral loads. Understanding the applications of dPCR will help shape future diagnosis and monitoring of infectious disease outbreaks.
CLINICAL MICROBIOLOGY REVIEWS
(2022)
Article
Virology
Changchang Li, Raphael Nyaruaba, Xiaowei Zhao, Heng Xue, Yuhong Li, Hang Yang, Hongping Wei
Summary: This study tested the efficacy of a lysin-loaded hydrogel in treating wound infections caused by resistant bacteria. The results showed that the lysin hydrogel effectively inhibited bacterial growth and had no cytotoxic effects on cells.
Article
Pharmacology & Pharmacy
Yuncheng Wang, Dipesh Khanal, Adit B. Alreja, Hang Yang, Rachel Y. K. Chang, Waiting Tai, Mengyu Li, Daniel C. Nelson, Warwick J. Britton, Hak-Kim Chan
Summary: This study investigated the feasibility of producing inhalable powders of endolysins Cpl-1 and ClyJ-3 using spray drying method with excipients. The results showed that ClyJ-3 lost its bioactivity before the drying process, while Cpl-1 maintained its bioactivity in the spray-dried powders. Cpl-1 formulations with leucine and either lactose or trehalose exhibited promising physico-chemical properties and aerosol performances. These findings suggest that endolysin Cpl-1 can be formulated as spray dry powders for potential treatment of pulmonary infections.
INTERNATIONAL JOURNAL OF PHARMACEUTICS
(2023)
Correction
Microbiology
Raphael Nyaruaba, Caroline Mwaliko, David Dobnik, Pavel Neuzil, Patrick Amoth, Matilu Mwau, Junping Yu, Hang Yang, Hongping Wei
CLINICAL MICROBIOLOGY REVIEWS
(2023)