RNA Editing and Its Roles in Plant Organelles

A-to-I RNA Editing Uncovers Hidden Signals of Adaptive Genome Evolution in Animals

(2020) Niko Popitsch et al.   Genome Biology and Evolution

Detection and Analysis of C-to-U RNA Editing in Rice Mitochondria-Encoded ORFs

(2020) Peng Zheng et al.   Plants-Basel

Stable native RIP9 complexes associate with C‐to‐U RNA editing activity, PPRs, RIPs, OZ1, ORRM1, and ISE2

(2019) Rafael Sandoval et al.   PLANT JOURNAL

Dynamic response of RNA editing to temperature in grape by RNA deep sequencing

(2019) Aidi Zhang et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Plant organellar RNA editing: what 30 years of research has revealed

(2019) Ian D. Small et al.   PLANT JOURNAL

Plant organelle RNA editing and its specificity factors: enhancements of analyses and new database features in PREPACT 3.0

(2018) Henning Lenz et al.   BMC BIOINFORMATICS

Towards a comprehensive picture of C-to-U RNA editing sites in angiosperm mitochondria

(2018) Alejandro A. Edera et al.   PLANT MOLECULAR BIOLOGY

REDIdb 3.0: A Comprehensive Collection of RNA Editing Events in Plant Organellar Genomes

(2018) Claudio Lo Giudice et al.   Frontiers in Plant Science

ORRM5, an RNA recognition motif-containing protein, has a unique effect on mitochondrial RNA editing

(2017) Xiaowen Shi et al.   JOURNAL OF EXPERIMENTAL BOTANY

An Organelle RNA Recognition Motif Protein is Required for Photosynthetic Subunit psbF Transcript Editing

(2017) Justin B Hackett et al.   PLANT PHYSIOLOGY

Two interacting PPR proteins are major Arabidopsis editing factors in plastid and mitochondria

(2017) Damien Guillaumot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA editing machinery in plant organelles

(2017) Junjie Yan et al.   Science China-Life Sciences

Whole plastid transcriptomes reveal abundant RNA editing sites and differential editing status in Phalaenopsis aphrodite subsp. formosana

(2017) Ting-Chieh Chen et al.   Botanical Studies

Reverse U-to-C editing exceeds C-to-U RNA editing in some ferns – a monilophyte-wide comparison of chloroplast and mitochondrial RNA editing suggests independent evolution of the two processes in both organelles

(2016) Nils Knie et al.   BMC EVOLUTIONARY BIOLOGY

Redefining the structural motifs that determine RNA binding and RNA editing by pentatricopeptide repeat proteins in land plants

(2016) Shifeng Cheng et al.   PLANT JOURNAL

Identification and Analysis of RNA Editing Sites in the Chloroplast Transcripts of Aegilops tauschii L.

(2016) Mengxing Wang et al.   Genes

MEF13 Requires MORF3 and MORF8 for RNA Editing at Eight Targets in Mitochondrial mRNAs in Arabidopsis thaliana

(2015) Franziska Glass et al.   Molecular Plant

RNA Recognition Motif-Containing Protein ORRM4 Broadly Affects Mitochondrial RNA Editing and Impacts Plant Development and Flowering

(2015) Xiaowen Shi et al.   PLANT PHYSIOLOGY

A Zinc Finger Motif-Containing Protein Is Essential for Chloroplast RNA Editing

(2015) Tao Sun et al.   PLoS Genetics

Transcriptional Slippage and RNA Editing Increase the Diversity of Transcripts in Chloroplasts: Insight from Deep Sequencing of Vigna radiata Genome and Transcriptome

(2015) Ching-Ping Lin et al.   PLoS One

Pentatricopeptide Repeat Proteins in Plants

(2014) Alice Barkan et al.   Annual Review of Plant Biology

Deep sequencing of the tobacco mitochondrial transcriptome reveals expressed ORFs and numerous editing sites outside coding regions

(2014) Benjamin T Grimes et al.   BMC GENOMICS

Tetrapyrrole biosynthetic enzyme protoporphyrinogen IX oxidase 1 is required for plastid RNA editing

(2014) Fan Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Chloroplast RNA editing going extreme: more than 3400 events of C-to-U editing in the chloroplast transcriptome of the lycophyteSelaginella uncinata

(2014) Bastian Oldenkott et al.   RNA

The Arabidopsis thaliana RNA Editing Factor SLO2, which Affects the Mitochondrial Electron Transport Chain, Participates in Multiple Stress and Hormone Responses

(2013) Qiang Zhu et al.   Molecular Plant

Structural basis for the modular recognition of single-stranded RNA by PPR proteins

(2013) Ping Yin et al.   NATURE

Empty Pericarp5 Encodes a Pentatricopeptide Repeat Protein That Is Required for Mitochondrial RNA Editing and Seed Development in Maize

(2013) Y.-J. Liu et al.   PLANT CELL

An RNA recognition motif-containing protein is required for plastid RNA editing in Arabidopsis and maize

(2013) T. Sun et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PPR2263, a DYW-Subgroup Pentatricopeptide Repeat Protein, Is Required for Mitochondrial nad5 and cob Transcript Editing, Mitochondrion Biogenesis, and Maize Growth

(2012) D. Sosso et al.   PLANT CELL

RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing

(2012) S. Bentolila et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple organellar RNA editing factor (MORF) family proteins are required for RNA editing in mitochondria and plastids of plants

(2012) M. Takenaka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functions and Regulation of RNA Editing by ADAR Deaminases

(2010) Kazuko Nishikura   Annual Review of Biochemistry

The SLO1 PPR protein is required for RNA editing at multiple sites with similar upstream sequences in Arabidopsis mitochondria

(2010) Tzu-Ying Sung et al.   PLANT JOURNAL

RiceOGR1encodes a pentatricopeptide repeat-DYW protein and is essential for RNA editing in mitochondria

(2009) Sung-Ryul Kim et al.   PLANT JOURNAL

The Arabidopsis gene YS1 encoding a DYW protein is required for editing of rpoB transcripts and the rapid development of chloroplasts during early growth

(2008) Wenbin Zhou et al.   PLANT JOURNAL