Complete Genome Sequence of the Newly Developed Lactobacillus acidophilus Strain With Improved Thermal Adaptability

A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae

(2020) Jinshui Zheng et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Lactobacillus acidophilus and L. plantarum improve health status, modulate gut microbiota and innate immune response of marron (Cherax cainii)

(2020) Md Javed Foysal et al.   Scientific Reports

Complete Genomic Analysis of Enterococcus faecium Heat-Resistant Strain Developed by Two-Step Adaptation Laboratory Evolution Method

(2020) Bonggyu Min et al.   Frontiers in Bioengineering and Biotechnology

Domestication of Industrial Microbes

(2019) Jan Steensels et al.   CURRENT BIOLOGY

OrthoVenn2: a web server for whole-genome comparison and annotation of orthologous clusters across multiple species

(2019) Ling Xu et al.   NUCLEIC ACIDS RESEARCH

Lysates of Lactobacillus acidophilus combined with CTLA-4-blocking antibodies enhance antitumor immunity in a mouse colon cancer model

(2019) Qian Zhuo et al.   Scientific Reports

Lactobacillus acidophilus Improves Intestinal Inflammation in an Acute Colitis Mouse Model by Regulation of Th17 and Treg Cell Balance and Fibrosis Development

(2018) Jin-Sil Park et al.   JOURNAL OF MEDICINAL FOOD

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

BAGEL4: a user-friendly web server to thoroughly mine RiPPs and bacteriocins

(2018) Auke J van Heel et al.   NUCLEIC ACIDS RESEARCH

Genome Editing with CRISPR-Cas9 in Lactobacillus plantarum Revealed That Editing Outcomes Can Vary Across Strains and Between Methods

(2018) Ryan T. Leenay et al.   Biotechnology Journal

Skin Moisturizing and Antiphotodamage Effects of Tyndallized Lactobacillus acidophilus IDCC 3302

(2018) A-Rang Im et al.   JOURNAL OF MEDICINAL FOOD

Hyaluronic acid production enhancement via genetically modification and culture medium optimization in Lactobacillus acidophilus

(2018) Fatemeh Fotouhi Chahuki et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

The effects of steam conditioning and antimicrobial inclusion on feed manufacturing and inactivation of Enterococcus faecium, a Salmonella surrogate

(2018) J W Boney et al.   JOURNAL OF APPLIED POULTRY RESEARCH

Effects of heat, cold, acid and bile salt adaptations on the stress tolerance and protein expression of kefir-isolated probiotic Lactobacillus kefiranofaciens M1

(2017) Ming-Ju Chen et al.   FOOD MICROBIOLOGY

IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets

(2017) Claire Bertelli et al.   NUCLEIC ACIDS RESEARCH

Adaptation of Lactobacillus acidophilus to Thermal Stress Yields a Thermotolerant Variant Which Also Exhibits Improved Survival at pH 2

(2017) Sonia Kulkarni et al.   Probiotics and Antimicrobial Proteins

S-layer production by Lactobacillus acidophilus IBB 801 under environmental stress conditions

(2016) Silvia-Simona Grosu-Tudor et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Influence of osmotic stress on the profile and gene expression of surface layer proteins in Lactobacillus acidophilus ATCC 4356

(2016) María Mercedes Palomino et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Common Mechanism of Cross-Resistance Development in Pathogenic Bacteria Bacillus cereus Against Alamethicin and Pediocin Involves Alteration in Lipid Composition

(2016) Sunita Meena et al.   CURRENT MICROBIOLOGY

Effects of synbiotic fermented milk containing Lactobacillus acidophilus La-5 and Bifidobacterium animalis ssp. lactis BB-12 on the fecal microbiota of adults with irritable bowel syndrome: A randomized double-blind, placebo-controlled trial

(2016) Bojana Bogovič Matijašić et al.   JOURNAL OF DAIRY SCIENCE

Encapsulation of Lactobacillus casei ATCC 393 cells and evaluation of their survival after freeze-drying, storage and under gastrointestinal conditions

(2016) Meng Xu et al.   JOURNAL OF FOOD ENGINEERING

Effects ofLactobacillus acidophilussupplementation on growth performance, nutrient digestibility, fecal microbial and noxious gas emission in weaning pigs

(2016) Ruixia Lan et al.   JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE

PHASTER: a better, faster version of the PHAST phage search tool

(2016) David Arndt et al.   NUCLEIC ACIDS RESEARCH

Factors essential for L,D-transpeptidase-mediated peptidoglycan cross-linking and β-lactam resistance in Escherichia coli

(2016) Jean-Emmanuel Hugonnet et al.   eLife

Genomic analyses of thermotolerant microorganisms used for high-temperature fermentations

(2015) Kazunobu Matsushita et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Resistance of functional Lactobacillus plantarum strains against food stress conditions

(2015) Verónica Ferrando et al.   FOOD MICROBIOLOGY

Heat stress effects on livestock: molecular, cellular and metabolic aspects, a review

(2015) I. Belhadj Slimen et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Loss of a Functionally and Structurally Distinct ld-Transpeptidase, LdtMt5, Compromises Cell Wall Integrity inMycobacterium tuberculosis

(2015) Leighanne A. Brammer Basta et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Isolation and characterization ofBacillus subtilisCH16 strain from chicken gastrointestinal tracts for use as a feed supplement to promote weight gain in broilers

(2015) A.T.V. Nguyen et al.   LETTERS IN APPLIED MICROBIOLOGY

The Cpx Envelope Stress Response Modifies Peptidoglycan Cross-Linking via the l,d-Transpeptidase LdtD and the Novel Protein YgaU

(2014) Margarita Bernal-Cabas et al.   JOURNAL OF BACTERIOLOGY

Real-Time Whole-Genome Sequencing for Routine Typing, Surveillance, and Outbreak Detection of Verotoxigenic Escherichia coli

(2014) K. G. Joensen et al.   JOURNAL OF CLINICAL MICROBIOLOGY

ARG-ANNOT, a New Bioinformatic Tool To Discover Antibiotic Resistance Genes in Bacterial Genomes

(2013) Sushim Kumar Gupta et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

The Role of Cell Surface Architecture of Lactobacilli in Host-Microbe Interactions in the Gastrointestinal Tract

(2013) Ranjita Sengupta et al.   MEDIATORS OF INFLAMMATION

Adaptive laboratory evolution – principles and applications for biotechnology

(2013) Martin Dragosits et al.   Microbial Cell Factories

Effects of yeast (Saccharomyces cerevisiae) and yeast protein concentrate on production performance of broiler chickens exposed to heat stress and challenged with Salmonella enteritidis

(2011) S. Haldar et al.   ANIMAL FEED SCIENCE AND TECHNOLOGY

Bacteriocin Production: a Probiotic Trait?

(2011) Alleson Dobson et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PGAP: pan-genomes analysis pipeline

(2011) Yongbing Zhao et al.   BIOINFORMATICS

Adaptive laboratory evolution—harnessing the power of biology for metabolic engineering

(2011) Vasiliy A Portnoy et al.   CURRENT OPINION IN BIOTECHNOLOGY

Clostridium difficileHas an Original Peptidoglycan Structure with a High Level ofN-Acetylglucosamine Deacetylation and Mainly 3-3 Cross-links

(2011) Johann Peltier et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Transcriptome Analysis of Adaptive Heat Shock Response of Streptococcus thermophilus

(2011) Jin-song Li et al.   PLoS One

Evolution ofEscherichia colifor Growth at High Temperatures

(2010) Birgit Rudolph et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Mycobacterium tuberculosis protein LdtMt2 is a nonclassical transpeptidase required for virulence and resistance to amoxicillin

(2010) Radhika Gupta et al.   NATURE MEDICINE

Shifting the genomic gold standard for the prokaryotic species definition

(2009) Michael Richter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

NCBI BLAST: a better web interface

(2008) M. Johnson et al.   NUCLEIC ACIDS RESEARCH