Article
Biodiversity Conservation
Laura Roquer-Beni, Georgina Alins, Xavier Arnan, Virginie Boreux, Daniel Garcia, Peter A. Hamback, Anne-Kathrin Happe, Alexandra-Maria Klein, Marcos Minarro, Karsten Mody, Mario Porcel, Anselm Rodrigo, Ulrika Samnegard, Marco Tasin, Jordi Bosch
Summary: Pollinator functional diversity enables pollinator communities to respond to agricultural intensification and increase pollination function. Orchards with high pollinator functional diversity in low-intensity settings can achieve levels of pollination services similar to those in high-intensity orchards.
JOURNAL OF APPLIED ECOLOGY
(2021)
Article
Multidisciplinary Sciences
Martha Paola Barajas Barbosa, Dylan Craven, Patrick Weigelt, Pierre Denelle, Rudiger Otto, Sandra Diaz, Jonathan Price, Jose Maria Fernandez-Palacios, Holger Kreft
Summary: Oceanic island floras are known for their unique morphological characteristics and provide examples of trait evolution. These morphological shifts are believed to be influenced by the biogeographical processes and evolutionary histories of oceanic islands. However, the mechanisms behind the distribution and diversity of plant functional traits remain unclear.
Article
Forestry
Wensong Zhou, Yuxin Zhang, Shuang Zhang, Basil N. Yakimov, Keming Ma
Summary: The study found that along elevational gradients, phylogenetic and functional traits show inconsistent changes closely related to the abiotic environment. The community assembly of woody plants is significantly affected by both deterministic processes and the stochastic hypothesis, with the relationship between phylogenetic and functional traits changing according to different rules. These results enhance our understanding of forest community assembly mechanisms.
Article
Ecology
Tong Qiu, Aaron J. Bell, Jennifer J. Swenson, James S. Clark
Summary: This study investigates how habitat and trait syndromes mediate risks from climate change on ground beetle communities. The researchers synthesized abundance and trait data for 136 species and used remote sensing techniques to obtain habitat information at a continental scale. The results show that habitat has a greater impact on species abundance and community traits compared to climate. The findings have important implications for the designation of critical habitats for carabid conservation.
GLOBAL ECOLOGY AND BIOGEOGRAPHY
(2023)
Article
Ecology
Sean M. Sultaire, Andrew J. Kroll, Jake Verschuyl, Douglas A. Landis, Gary J. Roloff
Summary: The study found that retention forestry can increase species diversity in recently harvested forests, but its effect on functional trait diversity is less understood. It was also discovered that there is lower taxonomic and functional trait variation in stands with several small retention patches compared to other retention patterns.
Article
Agronomy
Ying Pan, Duanyang Yuan, Qihang Wu, Ling Jin, Mingli Xie, Yang Gu, Changqun Duan
Summary: The study revealed that water exchange rate affects the competition outcomes of submerged macrophyte species, with the relative competitive ability of each species being more strongly correlated to competition-trait hierarchy rather than competition-trait similarity.
Article
Fisheries
Yintao Jia, Yihang Jiang, Yuhan Liu, Xiaoyun Sui, Xiu Feng, Ren Zhu, Kemao Li, Yifeng Chen
Summary: In 30 shallow lakes, patterns of functional and phylogenetic alpha diversity in fishes were examined, revealing no clear patterns among multiple biodiversity components and their environmental drivers, with no single component serving as a reliable proxy for another. Results suggest that accounting for both functional and phylogenetic diversity can help explain fish community variation.
REVIEWS IN FISH BIOLOGY AND FISHERIES
(2022)
Article
Materials Science, Multidisciplinary
Ting Wang, Xiaoyang Wang, Xiaolei Ma, Long Cheng, Yue Yuan, Wangguo Guo, Ke Xu, Mi Liu, Ziyang Xie, Liping Guo, Guang-Hong Lu
Summary: In this study, the influence of neon on tungsten recrystallization and its underlying mechanism were investigated through experimental analysis and molecular dynamics simulation. The results show that neon ion irradiation can inhibit tungsten recrystallization, especially when the neon concentration reaches a certain level. This inhibitory effect is mainly attributed to the pinning effect of neon clusters on grain boundary movement.
JOURNAL OF MATERIALS SCIENCE & TECHNOLOGY
(2023)
Article
Plant Sciences
Jie-Ying Feng, Xin-Jie Jin, Sheng-Lu Zhang, Jia-Wen Yang, Shi-Peng Fei, Yu-Song Huang, Yan Liu, Zhe-Chen Qi, Pan Li
Summary: This article describes a new species - Smilax weniae, found in Southwest China. The species has unique peltate leaves and differs from a similar species in leaf shape, flower characteristics, and placement in a subclade based on genetic sequences. The research provides evidence for the validation of S. weniae as a new undescribed species and reports on its plastome characteristics.
Article
Biodiversity Conservation
Rafael Molina-Venegas, Gianluigi Ottaviani, Giandiego Campetella, Roberto Canullo, Stefano Chelli
Summary: Evolutionary history and environmental filtering shape the phylogenetic and functional structure of regional assemblages. The biogeographic deconstruction approach can help identify eco-evolutionary signals in extant regional assemblages.
Article
Ecology
Jin Gao, Zhiqi Peng, Haoming Zang, Yinchang Wang, Ning Ding, Siwen He, Thibault Datry, Beixin Wang
Summary: Land-use change, particularly urbanisation, has led to a significant decline in both species and functional diversity worldwide. However, the mechanism behind the impact of species loss on functional diversity remains unclear. This study aims to elucidate this mechanism by examining the association between species sensitivity and functional uniqueness, as well as their related functional traits. The findings suggest that urbanisation has a remarkable effect on the taxonomic and functional diversity of macroinvertebrates, and the decline in functional diversity is influenced by the sensitivity and functional uniqueness of species.
FRESHWATER BIOLOGY
(2023)
Article
Genetics & Heredity
Xiao-Yu Zhang, Huiying Gong, Qing Fang, Xuli Zhu, Libo Jiang, Rongling Wu
Summary: The study introduces a novel approach using a Holling type II functional response model to map genes affecting interspecific interactions. By applying this model to competition experiment data of two microbial species, previously uncharacterized QTLs responsible for microbial cooperation and competition were identified. This model offers a quantitative means for predicting the genetic architecture shaping the dynamic behavior of ecological communities.
FRONTIERS IN GENETICS
(2021)
Article
Environmental Sciences
Han Liu, Guihua Liu, Wei Xing
Summary: The study found that in eutrophic shallow lakes along the middle-lower reaches of the Yangtze River, flat-leaf submerged macrophytes have stronger functional traits, improving underwater light conditions and water quality, while needle-leaf submerged macrophytes exhibit higher ecological functions.
SCIENCE OF THE TOTAL ENVIRONMENT
(2021)
Article
Evolutionary Biology
Liang Xu, Sander Van Doorn, Hanno Hildenbrandt, Rampal S. Etienne
Summary: Models of trait evolution include classic independent evolution models and newer models incorporating species interactions. Current models assume a fitness function and do not consider the dynamics of trait variance.
SYSTEMATIC BIOLOGY
(2021)
Article
Plant Sciences
Fernando Tuya, Javier Martinez-Perez, Alvaro Fueyo, Nestor E. Bosch
Summary: Our study demonstrates the strong phylogenetic signal in seagrasses, particularly in reproductive traits, and supports the OU model as the most parsimonious pattern of niche conservatism.
JOURNAL OF ECOLOGY
(2023)
Review
Biodiversity Conservation
Roderick B. Gagne, Kevin R. Crooks, Meggan E. Craft, Elliott S. Chiu, Nicholas M. Fountain-Jones, Jennifer L. Malmberg, Scott Carver, W. Chris Funk, Sue VandeWoude
Summary: Parasites' relationship with hosts provides insights into host populations and environmental quality, serving as a new approach to manage conservation threats.
CONSERVATION BIOLOGY
(2022)
Article
Ecology
Elizabeth R. Ellwood, Amanda S. Gallinat, Caitlin McDonough MacKenzie, Tara Miller, Abraham J. Miller-Rushing, Caroline Polgar, Richard B. Primack
Summary: Concord, Massachusetts, USA has been an active site for phenological observations since 1851, with a time series of data spanning 118 years. These data have been invaluable for addressing issues such as climate change, conservation, and ecology.
Editorial Material
Biochemistry & Molecular Biology
Nicholas M. Fountain-Jones, Megan L. Smith, Frederic Austerlitz
MOLECULAR ECOLOGY RESOURCES
(2021)
Editorial Material
Biochemistry & Molecular Biology
Shawn Narum, Joanna Kelley, Nick Fountain-Jones, Rebecca Hooper, Daniel Ortiz-Barrientos, Bridget O'Boyle, Ben Sibbett
MOLECULAR ECOLOGY RESOURCES
(2022)
Article
Multidisciplinary Sciences
Faisal Alsayegh, Moh A. Alkhamis, Fatima Ali, Sreeja Attur, Nicholas M. Fountain-Jones, Mohammad Zubaid
Summary: Acute coronary syndromes (ACS) are a major cause of global mortality, posing a significant challenge for diagnosis and treatment. This study aims to uncover factors influencing ACS outcomes and explore the role of anemia in the most common in-hospital outcomes (mortality, heart failure, and bleeding) in the region. By utilizing interpretable machine learning techniques, the study found that in-hospital heart failure followed by anemia was the most important predictor of mortality, while anemia was the top predictor for both heart failure and bleeding. Furthermore, the study revealed that anemia had a nonlinear relationship with ACS outcomes and patients' baseline characteristics.
Article
Virology
Simona Kraberger, Laurel E. K. Serieys, Cecile Richet, Nicholas M. Fountain-Jones, Guy Baele, Jacqueline M. Bishop, Mary Nehring, Jacob S. Ivan, Eric S. Newkirk, John R. Squires, Michael C. Lund, Seth PD. Riley, Christopher C. Wilmers, Paul D. van Helden, Koenraad Van Doorslaer, Melanie Culver, Sue VandeWoude, Darren P. Martin, Arcind Varsani
Summary: Anellovirus infections are highly prevalent in mammals, with diverse anellovirus genomes identified in pumas, bobcats, Canada lynx, caracals, and domestic cats. Phylogenetic analysis revealed two distinct clusters of felid-derived anellovirus sequences, indicating a long coevolution history. Coinfections of diverse anelloviruses are common among felids, with evidence of recombination within and between felid-specific anellovirus groups.
Article
Infectious Diseases
Joel Cuffey, Christopher A. Lepczyk, Shuoli Zhao, Nicholas M. Fountain-Jones
Summary: Toxoplasma gondii exposure is associated with higher BMI and worse diet quality among lower-income females, particularly at higher levels of BMI and worse diet quality. However, no associations were found among males.
PLOS NEGLECTED TROPICAL DISEASES
(2021)
Article
Ecology
Nicholas M. Fountain-Jones, Simona Kraberger, Roderick B. Gagne, Marie L. J. Gilbertson, Daryl R. Trumbo, Michael Charleston, Patricia E. Salerno, W. Chris Funk, Kevin Crooks, Kenneth Logan, Mathew Alldredge, Simon Dellicour, Guy Baele, Xavier Didelot, Sue VandeWoude, Scott Carver, Meggan E. Craft
Summary: This study investigates the effects of hunting on the dynamics of feline immunodeficiency virus (FIV) in puma. The results show that stopping hunting disrupts male social structure and leads to changes in viral transmission and evolution. These findings highlight the importance of wildlife management in controlling pathogen dynamics.
NATURE ECOLOGY & EVOLUTION
(2022)
Article
Ecology
Michael Stemkovski, James R. Bell, Elizabeth R. Ellwood, Brian D. Inouye, Hiromi Kobori, Sang Don Lee, Trevor Lloyd-Evans, Richard B. Primack, Barbara Templ, William D. Pearse
Summary: Advancing spring phenology is a well documented consequence of anthropogenic climate change. However, the variability of phenology year to year under climate change is not well understood. This study analyzes a broad range of phenological shifts, temperature sensitivity, and changes in interannual variability across the Northern Hemisphere. The study found that leaf-out, flowering, insect first-occurrence, and bird arrival are the most sensitive to temperature variation and have advanced at the fastest pace for early-season species in colder and less seasonal regions. The study did not find evidence for changing variability in warmer years, but found that leaf-out and flower phenology have become moderately less variable over time. Overall, the study suggests that climate change has not fundamentally altered the patterns of interannual phenological variability.
Article
Engineering, Environmental
Barnaby Dobson, Saoirse Barry, Robin Maes-Prior, Ana Mijic, Guy Woodward, William D. Pearse
Summary: There is often a disconnect between biomonitoring of water quality and catchment management due to mismatching scales. Traditional freshwater biomonitoring schemes mainly focus on organic pollution indicators, ignoring rare and invasive species. Repurposing such data could provide new biomonitoring tools, helping catchment managers link water quality control with biodiversity protection.
Article
Ecology
Abigail S. L. Lewis, Christine R. Rollinson, Andrew J. Allyn, Jaime Ashander, Stephanie Brodie, Cole B. Brookson, Elyssa Collins, Michael C. Dietze, Amanda S. Gallinat, Noel Juvigny-Khenafou, Gerbrand Koren, Daniel J. McGlinn, Hassan Moustahfid, Jody A. Peters, Nicholas R. Record, Caleb J. Robbins, Jonathan Tonkin, Glenda M. Wardle
Summary: This article introduces a conceptual framework that describes how ecological forecasting can energize and advance ecological theory. The authors emphasize the potential for future progress through increased forecast development, comparison, and synthesis. They envision a future where forecasting is integrated as part of the toolset used in fundamental ecology, and aim to decrease barriers to entry and broaden the community of researchers using forecasting for fundamental ecological insight.
METHODS IN ECOLOGY AND EVOLUTION
(2023)
Letter
Plant Sciences
William D. Pearse, Michael Stemkovski, Benjamin R. R. Lee, Richard B. Primack, Sang Don Lee
Review
Biophysics
Richard B. Primack, Amanda S. Gallinat, Elizabeth R. Ellwood, Theresa M. Crimmins, Mark D. Schwartz, Michelle D. Staudinger, Abraham J. Miller-Rushing
Summary: In recent years, there has been a rapid increase in the number and diversity of phenological studies. These studies, including innovative experiments, field research, citizen science projects, and analysis of historical data, are providing valuable insights into ecological and evolutionary responses to the environment, especially climate change. However, analyzing and interpreting phenological data can be challenging due to hidden peculiarities in the data sets. This paper presents ten best practices for designing, evaluating, and analyzing plant and animal phenological studies, aiming to help researchers, particularly those new to the field, make the most of available data and approaches to advance our understanding of phenology and its ecological implications.
INTERNATIONAL JOURNAL OF BIOMETEOROLOGY
(2023)