Structures of prokaryotic ubiquitin-like protein Pup in complex with depupylase Dop reveal the mechanism of catalytic phosphate formation
出版年份 2021 全文链接
标题
Structures of prokaryotic ubiquitin-like protein Pup in complex with depupylase Dop reveal the mechanism of catalytic phosphate formation
作者
关键词
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出版物
Nature Communications
Volume 12, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2021-11-17
DOI
10.1038/s41467-021-26848-x
参考文献
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注意:仅列出部分参考文献,下载原文获取全部文献信息。- Octahedral Trifluoromagnesate, an Anomalous Metal Fluoride Species, Stabilizes the Transition State in a Biological Motor
- (2021) Mengyu Ge et al. ACS Catalysis
- Survival in Hostile Conditions: Pupylation and the Proteasome in Actinobacterial Stress Response Pathways
- (2021) Tatjana von Rosen et al. Frontiers in Molecular Biosciences
- Inter‐ and intramolecular regulation of protein depupylation in Mycobacterium smegmatis
- (2020) Nir Hecht et al. FEBS Journal
- Exploring protein space: From hydrolase to ligase by substitution
- (2020) Nir Hecht et al. MOLECULAR BIOLOGY AND EVOLUTION
- Regulation of Phosphoribosyl-Linked Serine Ubiquitination by Deubiquitinases DupA and DupB
- (2019) Donghyuk Shin et al. MOLECULAR CELL
- Targeting the Proteostasis Network for Mycobacterial Drug Discovery
- (2018) Tania J. Lupoli et al. ACS Infectious Diseases
- Depupylase Dop Requires Inorganic Phosphate in the Active Site for Catalysis
- (2017) Marcel Bolten et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Prokaryotic Ubiquitin-Like Protein and Its Ligase/Deligase Enyzmes
- (2017) Cyrille L. Delley et al. JOURNAL OF MOLECULAR BIOLOGY
- Prokaryotic ubiquitin-like protein remains intrinsically disordered when covalently attached to proteasomal target proteins
- (2017) Jonas Barandun et al. BMC STRUCTURAL BIOLOGY
- Metal Fluorides: Tools for Structural and Computational Analysis of Phosphoryl Transfer Enzymes
- (2017) Yi Jin et al. Topics in Current Chemistry
- Development of a fluorescence anisotropy-based assay for Dop, the first enzyme in the pupylation pathway
- (2015) Nir Hecht et al. ANALYTICAL BIOCHEMISTRY
- Sequential substitution of K+ bound to Na+,K+-ATPase visualized by X-ray crystallography
- (2015) Haruo Ogawa et al. Nature Communications
- How good are my data and what is the resolution?
- (2013) Philip R. Evans et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Proteases in Mycobacterium tuberculosis pathogenesis: potential as drug targets
- (2013) David M Roberts et al. Future Microbiology
- Crystal Structure of the Complex between Prokaryotic Ubiquitin-like Protein and Its Ligase PafA
- (2013) Jonas Barandun et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Towards automated crystallographic structure refinement withphenix.refine
- (2012) Pavel V. Afonine et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Structures of Pup ligase PafA and depupylase Dop from the prokaryotic ubiquitin-like modification pathway
- (2012) Dennis Özcelik et al. Nature Communications
- Snapshots of the maltose transporter during ATP hydrolysis
- (2011) M. L. Oldham et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Integration, scaling, space-group assignment and post-refinement
- (2010) Wolfgang Kabsch ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Features and development ofCoot
- (2010) P. Emsley et al. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY
- Dop functions as a depupylase in the prokaryotic ubiquitin-like modification pathway
- (2010) Frank Imkamp et al. EMBO REPORTS
- Structural Basis for Feedback and Pharmacological Inhibition ofSaccharomyces cerevisiaeGlutamate Cysteine Ligase
- (2010) Ekaterina I. Biterova et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Mycobacterial Ubiquitin-like Protein Ligase PafA Follows a Two-step Reaction Pathway with a Phosphorylated Pup Intermediate
- (2010) Ethan Guth et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Prokaryotic Ubiquitin-like Protein (Pup) Is Coupled to Substrates via the Side Chain of Its C-Terminal Glutamate
- (2010) Markus Sutter et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- “Depupylation” of Prokaryotic Ubiquitin-like Protein from Mycobacterial Proteasome Substrates
- (2010) Kristin E. Burns et al. MOLECULAR CELL
- Bacterial ubiquitin-like modifier Pup is deamidated and conjugated to substrates by distinct but homologous enzymes
- (2009) Frank Striebel et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Unraveling the biochemistry and provenance of pupylation: a prokaryotic analog of ubiquitination
- (2008) Lakshminarayan M Iyer et al. Biology Direct
- Proteasomal Protein Degradation in Mycobacteria Is Dependent upon a Prokaryotic Ubiquitin-like Protein
- (2008) Kristin E. Burns et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Ubiquitin-Like Protein Involved in the Proteasome Pathway of Mycobacterium tuberculosis
- (2008) M. J. Pearce et al. SCIENCE
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