Recent advances in small-angle scattering and its expanding impact in structural biology
出版年份 2021 全文链接
标题
Recent advances in small-angle scattering and its expanding impact in structural biology
作者
关键词
Small-angle scattering, SAXS, SANS, time-resolved small-angle scattering, TR-SAXS, TR-SANS, ultra-small-angle scattering, USAXS, USANS, structure-based screening, biomolecular modeling, publication standards, data archiving
出版物
STRUCTURE
Volume 30, Issue 1, Pages 15-23
出版商
Elsevier BV
发表日期
2021-12-13
DOI
10.1016/j.str.2021.09.008
参考文献
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注意：仅列出部分参考文献，下载原文获取全部文献信息。- Design of biologically active binary protein 2D materials
- (2021) Ariel J. Ben-Sasson et al. NATURE
- A high-flux automated laboratory small-angle X-ray scattering instrument optimized for solution scattering
- (2021) Jeppe Lyngsø et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- A guide to time‐resolved structural analysis of light‐activated proteins
- (2021) Harshwardhan Poddar et al. FEBS Journal
- Small-angle X-ray scattering for the proteomics community: current overview and future potential
- (2021) Petri Kursula Expert Review of Proteomics
- Probing solution structure of the pentameric ligand-gated ion channel GLIC by small-angle neutron scattering
- (2021) Marie Lycksell et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Growing a thriving international community for small-angle scattering through collaboration
- (2021) Jill Trewhella JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Structure-based stabilization of non-native protein-protein interactions of coronavirus nucleocapsid proteins in antiviral drug design
- (2020) Shan-Meng Lin et al. JOURNAL OF MEDICINAL CHEMISTRY
- An automated data processing and analysis pipeline for transmembrane proteins in detergent solutions
- (2020) Dmitry S. Molodenskiy et al. Scientific Reports
- Structure-based screening of binding affinities via small-angle X-ray scattering
- (2020) Po-chia Chen et al. IUCrJ
- Biochemical characterization of SARS-CoV-2 nucleocapsid protein
- (2020) Weihong Zeng et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Interdomain Flexibility within NADPH Oxidase Suggested by SANS Using LMNG Stealth Carrier
- (2020) Annelise Vermot et al. BIOPHYSICAL JOURNAL
- Structural and functional conservation of the programmed −1 ribosomal frameshift signal of SARS coronavirus 2 (SARS-CoV-2)
- (2020) Jamie A. Kelly et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Protein folding from heterogeneous unfolded state revealed by time-resolved X-ray solution scattering
- (2020) Tae Wu Kim et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Beamline B21: high-throughput small-angle X-ray scattering at Diamond Light Source
- (2020) Nathan P. Cowieson et al. JOURNAL OF SYNCHROTRON RADIATION
- Effect of red blood cell shape changes on haemoglobin interactions and dynamics: a neutron scattering study
- (2020) Keyun Shou et al. Royal Society Open Science
- Hybrid Biopolymer and Lipid Nanoparticles with Improved Transfection Efficacy for mRNA
- (2020) Christian D. Siewert et al. Cells
- ATSAS 3.0: expanded functionality and new tools for small-angle scattering data analysis
- (2020) Karen Manalastas-Cantos et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Principles for Integrative Structural Biology Studies
- (2019) Michael P. Rout et al. CELL
- Evolving SAXS versatility: solution X-ray scattering for macromolecular architecture, functional landscapes, and integrative structural biology
- (2019) Chris A Brosey et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Time-resolved small-angle neutron scattering as a probe for the dynamics of lipid exchange between human lipoproteins and naturally derived membranes
- (2019) Selma Maric et al. Scientific Reports
- Newly developed Laboratory-based Size exclusion chromatography Small-angle x-ray scattering System (La-SSS)
- (2019) Rintaro Inoue et al. Scientific Reports
- Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures
- (2019) Helen M. Berman et al. STRUCTURE
- Structural Kinetics of MsbA Investigated by Stopped-Flow Time-Resolved Small-Angle X-Ray Scattering
- (2019) Inokentijs Josts et al. STRUCTURE
- Machine Learning Methods for X-Ray Scattering Data Analysis from Biomacromolecular Solutions
- (2018) Daniel Franke et al. BIOPHYSICAL JOURNAL
- Interpreting solution X-ray scattering data using molecular simulations
- (2018) Jochen S Hub CURRENT OPINION IN STRUCTURAL BIOLOGY
- Small-angle X-ray scattering study of the kinetics of light-dark transition in a LOV protein
- (2018) Katrin Röllen et al. PLoS One
- Conformational States of ABC Transporter MsbA in a Lipid Environment Investigated by Small-Angle Scattering Using Stealth Carrier Nanodiscs
- (2018) Inokentijs Josts et al. STRUCTURE
- Consensus Bayesian assessment of protein molecular mass from solution X-ray scattering data
- (2018) Nelly R. Hajizadeh et al. Scientific Reports
- Biological small-angle neutron scattering: recent results and development
- (2018) Emilie Mahieu et al. Acta Crystallographica Section D-Structural Biology
- An optimized SEC-SAXS system enabling high X-ray dose for rapid SAXS assessment with correlated UV measurements for biomolecular structure analysis
- (2018) Timothy M. Ryan et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- The suite of small-angle neutron scattering instruments at Oak Ridge National Laboratory
- (2018) William T. Heller et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- QUOKKA, the pinhole small-angle neutron scattering instrument at the OPAL Research Reactor, Australia: design, performance, operation and scientific highlights
- (2018) Kathleen Wood et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Integrative structure and functional anatomy of a nuclear pore complex
- (2018) Seung Joong Kim et al. NATURE
- Photocage-initiated time-resolved solution X-ray scattering investigation of protein dimerization
- (2018) Inokentijs Josts et al. IUCrJ
- SAXSMoW 2.0: Online calculator of the molecular weight of proteins in dilute solution from experimental SAXS data measured on a relative scale
- (2018) Vassili Piiadov et al. PROTEIN SCIENCE
- A Metastable Contact and Structural Disorder in the Estrogen Receptor Transactivation Domain
- (2018) Yi Peng et al. STRUCTURE
- Introducing SEC–SANS for studies of complex self-organized biological systems
- (2018) Nicolai Tidemand Johansen et al. Acta Crystallographica Section D-Structural Biology
- Size-exclusion chromatography small-angle X-ray scattering of water soluble proteins on a laboratory instrument
- (2018) Saskia Bucciarelli et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Upgraded SSRF BL19U2 beamline for small-angle X-ray scattering of biological macromolecules in solution
- (2018) Guangfeng Liu et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Designing Mixed Detergent Micelles for Uniform Neutron Contrast
- (2017) Ryan C. Oliver et al. Journal of Physical Chemistry Letters
- Rapid contrast matching by microfluidic SANS
- (2017) Marco Adamo et al. LAB ON A CHIP
- Contrast-Matched Isotropic Bicelles: A Versatile Tool to Specifically Probe the Solution Structure of Peripheral Membrane Proteins Using SANS
- (2017) Raphael Dos Santos Morais et al. LANGMUIR
- Xplor-NIH for molecular structure determination from NMR and other data sources
- (2017) Charles D. Schwieters et al. PROTEIN SCIENCE
- Molecular Architecture of the Major Membrane Ring Component of the Nuclear Pore Complex
- (2017) Paula Upla et al. STRUCTURE
- PDB-Dev: a Prototype System for Depositing Integrative/Hybrid Structural Models
- (2017) Stephen K. Burley et al. STRUCTURE
- The in vivo structure of biological membranes and evidence for lipid domains
- (2017) Jonathan D. Nickels et al. PLOS BIOLOGY
- Pepsi-SAXS: an adaptive method for rapid and accurate computation of small-angle X-ray scattering profiles
- (2017) Sergei Grudinin et al. Acta Crystallographica Section D-Structural Biology
- 2017 publication guidelines for structural modelling of small-angle scattering data from biomolecules in solution: an update
- (2017) Jill Trewhella et al. Acta Crystallographica Section D-Structural Biology
- In vivo analysis of the Escherichia coli ultrastructure by small-angle scattering
- (2017) Enrico F. Semeraro et al. IUCrJ
- Progress in small-angle scattering from biological solutions at high-brilliance synchrotrons
- (2017) Anne T. Tuukkanen et al. IUCrJ
- BioXTAS RAW: improvements to a free open-source program for small-angle X-ray scattering data reduction and analysis
- (2017) Jesse Bennett Hopkins et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- ATSAS 2.8: a comprehensive data analysis suite for small-angle scattering from macromolecular solutions
- (2017) D. Franke et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Time-resolved neutron scattering provides new insight into protein substrate processing by a AAA+ unfoldase
- (2017) Ziad Ibrahim et al. Scientific Reports
- Structure and Function of the Nuclear Pore Complex Cytoplasmic mRNA Export Platform
- (2016) Javier Fernandez-Martinez et al. CELL
- Small-angle scattering and 3D structure interpretation
- (2016) Jill Trewhella CURRENT OPINION IN STRUCTURAL BIOLOGY
- FoXS, FoXSDock and MultiFoXS: Single-state and multi-state structural modeling of proteins and their complexes based on SAXS profiles
- (2016) Dina Schneidman-Duhovny et al. NUCLEIC ACIDS RESEARCH
- Improved radiation dose efficiency in solution SAXS using a sheath flow sample environment
- (2016) Nigel Kirby et al. Acta Crystallographica Section D-Structural Biology
- SEC-SANS: size exclusion chromatography combinedin situwith small-angle neutron scattering
- (2016) Ashley Jordan et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Interpretation of Solution X-Ray Scattering by Explicit-Solvent Molecular Dynamics
- (2015) Po-chia Chen et al. BIOPHYSICAL JOURNAL
- Using synchrotrons and XFELs for time-resolved X-ray crystallography and solution scattering experiments on biomolecules
- (2015) Matteo Levantino et al. CURRENT OPINION IN STRUCTURAL BIOLOGY
- Exploring the repeat protein universe through computational protein design
- (2015) TJ Brunette et al. NATURE
- Correlation Map, a goodness-of-fit test for one-dimensional X-ray scattering spectra
- (2015) Daniel Franke et al. NATURE METHODS
- WAXSiS: a web server for the calculation of SAXS/WAXS curves based on explicit-solvent molecular dynamics
- (2015) Christopher J. Knight et al. NUCLEIC ACIDS RESEARCH
- Outcome of the First wwPDB Hybrid/Integrative Methods Task Force Workshop
- (2015) Andrej Sali et al. STRUCTURE
- Automated Pipeline for Purification, Biophysical and X-Ray Analysis of Biomacromolecular Solutions
- (2015) Melissa A. Graewert et al. Scientific Reports
- Versatile sample environments and automation for biological solution X-ray scattering experiments at the P12 beamline (PETRA III, DESY)
- (2015) Clement E. Blanchet et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Methods for analysis of size-exclusion chromatography–small-angle X-ray scattering and reconstruction of protein scattering
- (2015) Andrew W. Malaby et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Upgrade of MacCHESS facility for X-ray scattering of biological macromolecules in solution
- (2015) Alvin Samuel Acerbo et al. JOURNAL OF SYNCHROTRON RADIATION
- Integrative Structure–Function Mapping of the Nucleoporin Nup133 Suggests a Conserved Mechanism for Membrane Anchoring of the Nuclear Pore Complex
- (2014) Seung Joong Kim et al. MOLECULAR & CELLULAR PROTEOMICS
- SASBDB, a repository for biological small-angle scattering data
- (2014) Erica Valentini et al. NUCLEIC ACIDS RESEARCH
- A low-background-intensity focusing small-angle X-ray scattering undulator beamline
- (2013) Nigel M. Kirby et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Implementation and performance of SIBYLS: a dual endstation small-angle X-ray scattering and macromolecular crystallography beamline at the Advanced Light Source
- (2013) Scott Classen et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Upgraded ESRF BM29 beamline for SAXS on macromolecules in solution
- (2013) Petra Pernot et al. JOURNAL OF SYNCHROTRON RADIATION
- Accurate assessment of mass, models and resolution by small-angle scattering
- (2013) Robert P. Rambo et al. NATURE
- Comprehensive macromolecular conformations mapped by quantitative SAXS analyses
- (2013) Greg L Hura et al. NATURE METHODS
- Report of the wwPDB Small-Angle Scattering Task Force: Data Requirements for Biomolecular Modeling and the PDB
- (2013) Jill Trewhella et al. STRUCTURE
- Computation of small-angle scattering profiles with three-dimensional Zernike polynomials
- (2012) Haiguang Liu et al. ACTA CRYSTALLOGRAPHICA SECTION A
- TheSmall Angle Scattering ToolBox(SASTBX): an open-source software for biomolecular small-angle scattering
- (2012) Haiguang Liu et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Improved Fitting of Solution X-ray Scattering Data to Macromolecular Structures and Structural Ensembles by Explicit Water Modeling
- (2010) Alexander Grishaev et al. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
- Combined sampler robot and high-performance liquid chromatography: a fully automated system for biological small-angle X-ray scattering experiments at the Synchrotron SOLEIL SWING beamline
- (2009) G. David et al. JOURNAL OF APPLIED CRYSTALLOGRAPHY
- Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS)
- (2009) Greg L Hura et al. NATURE METHODS
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