Medicago root nodule microbiomes: insights into a complex ecosystem with potential candidates for plant growth promotion

Soybean Root Nodule and Rhizosphere Microbiome: Distribution of Rhizobial and Non-rhizobial Endophytes

(2021) Parris Mayhood et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Isolation and characterisation of endophytic actinobacteria and their effect on the growth and nodulation of chickpea (Cicer arietinum)

(2021) Q. A. Tuan Vo et al.   PLANT AND SOIL

Environmental variation impacts trait expression and selection in the legume–rhizobium symbiosis

(2020) Rebecca T. Batstone et al.   AMERICAN JOURNAL OF BOTANY

Micromonospora metallophores: A plant growth promotion trait useful for bacterial-assisted phytoremediation?

(2020) Maite Ortúzar et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Triplicate PCR reactions for 16S rRNA gene amplicon sequencing are unnecessary

(2019) Clarisse Marotz et al.   BIOTECHNIQUES

High taxonomic diversity of Micromonospora strains isolated from Medicago sativa nodules in Western Spain and Australia

(2019) Pilar Martínez-Hidalgo et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Two cultivated legume plants reveal the enrichment process of the microbiome in the rhizocompartments

(2017) Xiao Xiao et al.   MOLECULAR ECOLOGY

Mutualisms Are Not on the Verge of Breakdown

(2017) Megan E. Frederickson   TRENDS IN ECOLOGY & EVOLUTION

The rhizosphere microbiome of burned holm-oak: potential role of the genus Arthrobacter in the recovery of burned soils

(2017) Antonio J. Fernández-González et al.   Scientific Reports

Cowpea Nodules Harbor Non-rhizobial Bacterial Communities that Are Shaped by Soil Type Rather than Plant Genotype

(2017) Jakson Leite et al.   Frontiers in Plant Science

The occurrence of pesticides and persistent organic pollutants in Italian organic honeys from different productive areas in relation to potential environmental pollution

(2016) L.M. Chiesa et al.   CHEMOSPHERE

Impact of Soil Salinity on the Structure of the Bacterial Endophytic Community Identified from the Roots of Caliph Medic (Medicago truncatula)

(2016) Mahmoud W. Yaish et al.   PLoS One

Root nodule symbiosis inLotus japonicusdrives the establishment of distinctive rhizosphere, root, and nodule bacterial communities

(2016) Rafal Zgadzaj et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation

(2016) Matthew T. Agler et al.   PLOS BIOLOGY

The chitinase C gene PsChiC from Pseudomonas sp. and its synergistic effects on larvicidal activity

(2015) Wanfang Zhong et al.   GENETICS AND MOLECULAR BIOLOGY

Metagenomic Assessment of the Potential Microbial Nitrogen Pathways in the Rhizosphere of a Mediterranean Forest After a Wildfire

(2015) José F. Cobo-Díaz et al.   MICROBIAL ECOLOGY

Isolation and characterisation of endophytic actinobacteria and their effect on the early growth and nodulation of lucerne (Medicago sativa L.)

(2015) Xuyen H. Le et al.   PLANT AND SOIL

Dynamic Changes in the Subgingival Microbiome and Their Potential for Diagnosis and Prognosis of Periodontitis

(2015) Baochen Shi et al.   mBio

Induced systemic resistance against Botrytis cinerea by Micromonospora strains isolated from root nodules

(2015) Pilar Martínez-Hidalgo et al.   Frontiers in Microbiology

Mining the phytomicrobiome to understand how bacterial coinoculations enhance plant growth

(2015) Maskit Maymon et al.   Frontiers in Plant Science

Harnessing phytomicrobiome signaling for rhizosphere microbiome engineering

(2015) Liliana Quiza et al.   Frontiers in Plant Science

Utilization of chitinolytic bacterial isolates to control anthracnose of cocoa leaf caused by Colletotrichum gloeosporioides

(2014) Suryanto Dwi et al.   AFRICAN JOURNAL OF BIOTECHNOLOGY

Reclassification of rhizosphere bacteria including strains causing corky root of lettuce and proposal of Rhizorhapis suberifaciens gen. nov., comb. nov., Sphingobium mellinum sp. nov., Sphingobium xanthum sp. nov. and Rhizorhabdus argentea gen. nov., sp. nov.

(2014) I. M. Francis et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Biotic Interactions in the Rhizosphere: A Diverse Cooperative Enterprise for Plant Productivity

(2014) C. De-la-Pena et al.   PLANT PHYSIOLOGY

Rapid recovery of soil bacterial communities after wildfire in a Chinese boreal forest

(2014) Xingjia Xiang et al.   Scientific Reports

Micromonospora from nitrogen fixing nodules of alfalfa (Medicago sativa L.). A new promising Plant Probiotic Bacteria.

(2014) Pilar Martínez-Hidalgo et al.   Scientific Reports

A survey of the microbial community in the rhizosphere of two dominant shrubs of the Negev Desert highlands, Zygophyllum dumosum (Zygophyllaceae) and Atriplex halimus (Amaranthaceae), using cultivation-dependent and cultivation-independent methods

(2013) Drora Kaplan et al.   AMERICAN JOURNAL OF BOTANY

Chitin Amendment Increases Soil Suppressiveness toward Plant Pathogens and Modulates the Actinobacterial and Oxalobacteraceal Communities in an Experimental Agricultural Field

(2013) Mariana Silvia Cretoiu et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Diversity of sporadic symbionts and nonsymbiotic endophytic bacteria isolated from nodules of woody, shrub, and food legumes in Ethiopia

(2013) Aregu Amsalu Aserse et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Plant growth promotion in cereal and leguminous agricultural important plants: From microorganism capacities to crop production

(2013) F. Pérez-Montaño et al.   MICROBIOLOGICAL RESEARCH

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences

(2013) Morgan G I Langille et al.   NATURE BIOTECHNOLOGY

Quantitative divergence of the bacterial root microbiota in Arabidopsis thaliana relatives

(2013) K. Schlaeppi et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant growth-promoting rhizobacteria and root system functioning

(2013) Jordan Vacheron et al.   Frontiers in Plant Science

Bacillus simplex—A Little Known PGPB with Anti-Fungal Activity—Alters Pea Legume Root Architecture and Nodule Morphology When Coinoculated with Rhizobium leguminosarum bv. viciae

(2013) Allison Schwartz et al.   Agronomy-Basel

Tricalcium phosphate is inappropriate as a universal selection factor for isolating and testing phosphate-solubilizing bacteria that enhance plant growth: a proposal for an alternative procedure

(2012) Yoav Bashan et al.   BIOLOGY AND FERTILITY OF SOILS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species

(2011) O.-S. Kim et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

(2011) K. Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Enhanced nodulation and symbiotic effectiveness of Medicago truncatula when co-inoculated with Pseudomonas fluorescens WSM3457 and Ensifer (Sinorhizobium) medicae WSM419

(2011) Sharon Lee Fox et al.   PLANT AND SOIL

Pesticide Exposure, Safety Issues, and Risk Assessment Indicators

(2011) Christos A. Damalas et al.   International Journal of Environmental Research and Public Health

Nitratireductor aquimarinus sp. nov., isolated from a culture of the diatom Skeletonema costatum, and emended description of the genus Nitratireductor

(2010) G. I. Jang et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

The genus Micromonospora is widespread in legume root nodules: the example of Lupinus angustifolius

(2010) Martha E Trujillo et al.   ISME Journal

Shifts in bacterial community structure associated with inputs of low molecular weight carbon compounds to soil

(2010) Kathryn G. Eilers et al.   SOIL BIOLOGY & BIOCHEMISTRY

Purification and partial characterization of a 36-kDa chitinase from Bacillus thuringiensis subsp. colmeri, and its biocontrol potential

(2009) Dong Liu et al.   ENZYME AND MICROBIAL TECHNOLOGY

Evolution of pathogenicity in the Bacillus cereus group

(2009) Xavier Didelot et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

Coexistence of predominantly nonculturable rhizobia with diverse, endophytic bacterial taxa within nodules of wild legumes

(2008) Rosella Muresu et al.   FEMS MICROBIOLOGY ECOLOGY

Shinella kummerowiae sp. nov., a symbiotic bacterium isolated from root nodules of the herbal legume Kummerowia stipulacea

(2008) D. X. Lin et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY