Multimodal correlative imaging and modelling of phosphorus uptake from soil by hyphae of mycorrhizal fungi

Symbiotic soil fungi suppress N2O emissions but facilitate nitrogen remobilization to grains in sandy but not clay soils under organic amendments

(2021) Silong Zhai et al.   APPLIED SOIL ECOLOGY

Aphid Herbivory Drives Asymmetry in Carbon for Nutrient Exchange between Plants and an Arbuscular Mycorrhizal Fungus

(2020) Michael D. Charters et al.   CURRENT BIOLOGY

Root‐induced soil deformation influences Fe, S and P: rhizosphere chemistry investigated using synchrotron XRF and XANES

(2019) Arjen Veelen et al.   NEW PHYTOLOGIST

Growing Research Networks on Mycorrhizae for Mutual Benefits

(2018) Olga Ferlian et al.   TRENDS IN PLANT SCIENCE

Imaging microstructure of the barley rhizosphere: particle packing and root hair influences

(2018) Nicolai Koebernick et al.   NEW PHYTOLOGIST

Measurement of micro-scale soil deformation around roots using four-dimensional synchrotron tomography and image correlation

(2017) S. D. Keyes et al.   Journal of the Royal Society Interface

High-resolution synchrotron imaging shows that root hairs influence rhizosphere soil structure formation

(2017) Nicolai Koebernick et al.   NEW PHYTOLOGIST

Image-based modelling of nutrient movement in and around the rhizosphere

(2016) Keith R. Daly et al.   JOURNAL OF EXPERIMENTAL BOTANY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

The role of mycorrhizal symbiosis in aluminum and phosphorus interactions in relation to aluminum tolerance in soybean

(2015) Shuang Zhang et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

X-ray microfluorescence (μXRF) imaging of Aspergillus nidulans cell wall mutants reveals biochemical changes due to gene deletions

(2014) Margaret Rak et al.   ANALYTICAL AND BIOANALYTICAL CHEMISTRY

Characterization of the 18S rRNA Gene for Designing Universal Eukaryote Specific Primers

(2014) Kenan Hadziavdic et al.   PLoS One

The role of bacteria and mycorrhiza in plant sulfur supply

(2014) Jacinta Gahan et al.   Frontiers in Plant Science

A robust approach for determination of the macro-porous volume fraction of soils with X-ray computed tomography and an image processing protocol

(2013) S. D. Keyes et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes

(2012) Elmar Pruesse et al.   BIOINFORMATICS

Community assembly, species richness and nestedness of arbuscular mycorrhizal fungi in agricultural soils

(2012) ERIK VERBRUGGEN et al.   MOLECULAR ECOLOGY

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Modelling hyphal networks

(2012) Graeme P. Boswell et al.   Fungal Biology Reviews

Mycorrhizal networks: Mechanisms, ecology and modelling

(2012) Suzanne W. Simard et al.   Fungal Biology Reviews

Modelling Nutrient Uptake by Individual Hyphae of Arbuscular Mycorrhizal Fungi: Temporal and Spatial Scales for an Experimental Design

(2011) Andrea Schnepf et al.   BULLETIN OF MATHEMATICAL BIOLOGY

Sulfur Speciation in Soil by SK-Edge XANES Spectroscopy: Comparison of Spectral Deconvolution and Linear Combination Fitting

(2011) Jörg Prietzel et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Phosphorus Dynamics: From Soil to Plant

(2011) J. Shen et al.   PLANT PHYSIOLOGY

BoneJ: Free and extensible bone image analysis in ImageJ

(2010) Michael Doube et al.   BONE

Traits related to differences in function among three arbuscular mycorrhizal fungi

(2010) Cécile Thonar et al.   PLANT AND SOIL

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sulfur in soils

(2009) Heinrich Wilhelm Scherer   JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE

454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity

(2009) M. Buée et al.   NEW PHYTOLOGIST

DNA-based species level detection ofGlomeromycota: one PCR primer set for all arbuscular mycorrhizal fungi

(2009) Manuela Krüger et al.   NEW PHYTOLOGIST

The rhizosphere zoo: An overview of plant-associated communities of microorganisms, including phages, bacteria, archaea, and fungi, and of some of their structuring factors

(2009) M. Buée et al.   PLANT AND SOIL

Phosphorus: A Looming Crisis

(2009) David A. Vaccari   SCIENTIFIC AMERICAN

When Roots Lose Contact

(2009) Andrea Carminati et al.   VADOSE ZONE JOURNAL

Impact of growth and uptake patterns of arbuscular mycorrhizal fungi on plant phosphorus uptake—a modelling study

(2008) Andrea Schnepf et al.   PLANT AND SOIL

Sulfur Transfer through an Arbuscular Mycorrhiza

(2008) J. W. Allen et al.   PLANT PHYSIOLOGY

Colonisation by arbuscular mycorrhizal and fine endophytic fungi in four woodland grasses – variation in relation to pH and aluminium

(2008) Pernilla Göransson et al.   SOIL BIOLOGY & BIOCHEMISTRY

Growth model for arbuscular mycorrhizal fungi

(2007) A Schnepf et al.   Journal of the Royal Society Interface