Parallel selection of distinct Tof5 alleles drove the adaptation of cultivated and wild soybean to high latitudes

Ancient relaxation of an obligate short-day requirement in common bean through loss of CONSTANS-like gene function

(2021) Ana M. González et al.   CURRENT BIOLOGY

Overcoming the genetic compensation response of soybean florigens to improve adaptation and yield at low latitudes

(2021) Xiaoming Li et al.   CURRENT BIOLOGY

Principles and practices of the photo-thermal adaptability improvement in soybean

(2020) Li-xin ZHANG et al.   Journal of Integrative Agriculture

Flowering phenology as a core domestication trait in soybean

(2020) Zhizhong Gong   Journal of Integrative Plant Biology

Stepwise selection on homeologous PRR genes controlling flowering and maturity during soybean domestication

(2020) Sijia Lu et al.   NATURE GENETICS

Molecular mechanisms for the photoperiodic regulation of flowering in soybean

(2020) Xiaoya Lin et al.   Journal of Integrative Plant Biology

Cloning of a SEPALLATA4-like gene (IiSEP4) in Isatis indigotica Fortune and characterization of its function in Arabidopsis thaliana

(2020) Zuo-Qian Pu et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

Functional divergence between soybean FLOWERING LOCUS T orthologues, FT2a and FT5a, in post-flowering stem growth

(2019) Ryoma Takeshima et al.   JOURNAL OF EXPERIMENTAL BOTANY

Teosinte ligule allele narrows plant architecture and enhances high-density maize yields

(2019) Jinge Tian et al.   SCIENCE

Parallel selection on a dormancy gene during domestication of crops from multiple families

(2018) Min Wang et al.   NATURE GENETICS

De novo assembly of a Chinese soybean genome

(2018) Yanting Shen et al.   Science China-Life Sciences

Characterization of Two Growth Period QTLs Reveals Modification of PRR3 Genes During Soybean Domestication

(2018) Man-Wah Li et al.   PLANT AND CELL PHYSIOLOGY

Natural variation at the soybean J locus improves adaptation to the tropics and enhances yield

(2017) Sijia Lu et al.   NATURE GENETICS

QTL Location and Epistatic Effect Analysis of 100-Seed Weight Using Wild Soybean (Glycine soja Sieb. & Zucc.) Chromosome Segment Substitution Lines

(2016) Dawei Xin et al.   PLoS One

Parallel Domestication of theHeading Date 1Gene in Cereals

(2015) Huanhuan Liu et al.   MOLECULAR BIOLOGY AND EVOLUTION

A Robust CRISPR/Cas9 System for Convenient, High-Efficiency Multiplex Genome Editing in Monocot and Dicot Plants

(2015) Xingliang Ma et al.   Molecular Plant

GmmiR156b overexpression delays flowering time in soybean

(2015) Dong Cao et al.   PLANT MOLECULAR BIOLOGY

The Soybean-Specific Maturity GeneE1Family of Floral Repressors Controls Night-Break Responses through Down-Regulation ofFLOWERING LOCUS TOrthologs

(2015) Meilan Xu et al.   PLANT PHYSIOLOGY

De novo assembly of soybean wild relatives for pan-genome analysis of diversity and agronomic traits

(2014) Ying-hui Li et al.   NATURE BIOTECHNOLOGY

Optimization of crop productivity in tomato using induced mutations in the florigen pathway

(2014) Soon Ju Park et al.   NATURE GENETICS

Transcriptional Regulation of Fruit Ripening by Tomato FRUITFULL Homologs and Associated MADS Box Proteins

(2014) M. Fujisawa et al.   PLANT CELL

Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing

(2014) Xinpeng Qi et al.   Nature Communications

A Bountiful Harvest: Genomic Insights into Crop Domestication Phenotypes

(2013) Kenneth M. Olsen et al.   Annual Review of Plant Biology

Genetic variation in four maturity genes affects photoperiod insensitivity and PHYA-regulated post-flowering responses of soybean

(2013) Meilan Xu et al.   BMC PLANT BIOLOGY

A platform for soybean molecular breeding: the utilization of core collections for food security

(2013) Li-Juan Qiu et al.   PLANT MOLECULAR BIOLOGY

Genetic Variation in Soybean at the Maturity Locus E4 Is Involved in Adaptation to Long Days at High Latitudes

(2013) Yasutaka Tsubokura et al.   Agronomy-Basel

Genetic and molecular bases of photoperiod responses of flowering in soybean

(2012) Satoshi Watanabe et al.   BREEDING SCIENCE

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

Parallel domestication of the Shattering1 genes in cereals

(2012) Zhongwei Lin et al.   NATURE GENETICS

ZmCCT and the genetic basis of day-length adaptation underlying the postdomestication spread of maize

(2012) H.-Y. Hung et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Positional cloning and characterization reveal the molecular basis for soybean maturity locus E1 that regulates photoperiodic flowering

(2012) Z. Xia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Map-Based Cloning Strategy Employing a Residual Heterozygous Line Reveals that theGIGANTEAGene Is Involved in Soybean Maturity and Flowering

(2011) Satoshi Watanabe et al.   GENETICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Natural allelic variation underlying a major fitness trade-off in Arabidopsis thaliana

(2010) Marco Todesco et al.   NATURE

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection

(2010) Hon-Ming Lam et al.   NATURE GENETICS

Two Coordinately Regulated Homologs of FLOWERING LOCUS T Are Involved in the Control of Photoperiodic Flowering in Soybean

(2010) F. Kong et al.   PLANT PHYSIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Map-Based Cloning of the Gene Associated With the Soybean Maturity Locus E3

(2009) Satoshi Watanabe et al.   GENETICS

Stepwise Modification of a Modular Enhancer Underlies Adaptation in a Drosophila Population

(2009) M. Rebeiz et al.   SCIENCE

Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice

(2008) Weiya Xue et al.   NATURE GENETICS