Pleiotropy facilitates parallel adaptation in sticklebacks

Pleiotropy facilitates local adaptation to distant optima in common ragweed (Ambrosia artemisiifolia)

(2020) Tuomas Hämälä et al.   PLoS Genetics

Adaptation via pleiotropy and linkage: Association mapping reveals a complex genetic architecture within the stickleback Eda locus

(2020) Sophie L. Archambeault et al.   Evolution Letters

DNA fragility in the parallel evolution of pelvic reduction in stickleback fish

(2019) Kathleen T. Xie et al.   SCIENCE

Ecological factors and morphological traits are associated with repeated genomic differentiation between lake and stream stickleback

(2019) Diana J. Rennison et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Shared patterns of genome-wide differentiation are more strongly predicted by geography than by ecology

(2019) Diana Jessie Rennison et al.   AMERICAN NATURALIST

Parallel evolution of ancient, pleiotropic enhancers underlies butterfly wing pattern mimicry

(2019) James J. Lewis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

(Non)Parallel Evolution

(2018) Daniel I. Bolnick et al.   Annual Review of Ecology Evolution and Systematics

Correlated Evolution of Two Copulatory Organs via a Single cis-Regulatory Nucleotide Change

(2018) Olga Nagy et al.   CURRENT BIOLOGY

Gene flow and selection interact to promote adaptive divergence in regions of low recombination

(2017) Kieran Samuk et al.   MOLECULAR ECOLOGY

Connectivity in gene coexpression networks negatively correlates with rates of molecular evolution in flowering plants

(2017) Rishi R. Masalia et al.   PLoS One

Gene co-expression network connectivity is an important determinant of selective constraint

(2017) Niklas Mähler et al.   PLoS Genetics

Intermediate degrees of synergistic pleiotropy drive adaptive evolution in ecological time

(2017) Léa Frachon et al.   Nature Ecology & Evolution

Contrasting effects of environment and genetics generate a continuum of parallel evolution

(2017) Yoel E. Stuart et al.   Nature Ecology & Evolution

Evolution of Schooling Behavior in Threespine Sticklebacks Is Shaped by the Eda Gene

(2016) Anna K. Greenwood et al.   GENETICS

Transcriptome profiling of immune tissues reveals habitat-specific gene expression between lake and river sticklebacks

(2016) Yun Huang et al.   MOLECULAR ECOLOGY

The genetic and molecular architecture of phenotypic diversity in sticklebacks

(2016) Catherine L. Peichel et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Evolution of Schooling Behavior in Threespine Sticklebacks Is Shaped by the Eda Gene

(2016) Anna K. Greenwood et al.   GENETICS

Extent of QTL Reuse During Repeated Phenotypic Divergence of Sympatric Threespine Stickleback

(2015) G. L. Conte et al.   GENETICS

Synergistic Pleiotropy Overrides the Costs of Complexity in Viral Adaptation

(2015) L. W. McGee et al.   GENETICS

Pleiotropy and the evolution of floral integration

(2015) Stacey D. Smith   NEW PHYTOLOGIST

Pleiotropic effects of a single gene on skeletal development and sensory system patterning in sticklebacks

(2014) Margaret G Mills et al.   EvoDevo

Metabolic Erosion Primarily Through Mutation Accumulation, and Not Tradeoffs, Drives Limited Evolution of Substrate Specificity in Escherichia coli

(2014) Nicholas Leiby et al.   PLOS BIOLOGY

THE LOCI OF REPEATED EVOLUTION: A CATALOG OF GENETIC HOTSPOTS OF PHENOTYPIC VARIATION

(2013) Arnaud Martin et al.   EVOLUTION

Repeated and predictable patterns of ecotypic differentiation during a biological invasion: lake-stream divergence in parapatric Swiss stickleback

(2013) K. Lucek et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Recombination in the threespine stickleback genome-patterns and consequences

(2013) Marius Roesti et al.   MOLECULAR ECOLOGY

The genetic causes of convergent evolution

(2013) David L. Stern   NATURE REVIEWS GENETICS

STAR: ultrafast universal RNA-seq aligner

(2012) Alexander Dobin et al.   BIOINFORMATICS

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

The probability of genetic parallelism and convergence in natural populations

(2012) G. L. Conte et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

A Genome-wide SNP Genotyping Array Reveals Patterns of Global and Repeated Species-Pair Divergence in Sticklebacks

(2011) Felicity C. Jones et al.   CURRENT BIOLOGY

The pleiotropic structure of the genotype–phenotype map: the evolvability of complex organisms

(2011) Günter P. Wagner et al.   NATURE REVIEWS GENETICS

Genomic patterns of pleiotropy and the evolution of complexity

(2010) Z. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Ecological predictions lead to the discovery of a benthic–limnetic sympatric species pair of threespine stickleback in Little Quarry Lake, British Columbia

(2008) J. L. Gow et al.   CANADIAN JOURNAL OF ZOOLOGY

THE LOCI OF EVOLUTION: HOW PREDICTABLE IS GENETIC EVOLUTION?

(2008) David L. Stern et al.   EVOLUTION

Natural selection drives patterns of lake-stream divergence in stickleback foraging morphology

(2008) D. BERNER et al.   JOURNAL OF EVOLUTIONARY BIOLOGY