Pathogenesis-related protein 1 (PR-1) genes in soybean: Genome-wide identification, structural analysis and expression profiling under multiple biotic and abiotic stresses

IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era

(2020) Bui Quang Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Systematic analysis of 1,298 RNA‐Seq samples and construction of a comprehensive soybean ( Glycine max ) expression atlas

(2020) Fabricio Brum Machado et al.   PLANT JOURNAL

Dissecting the economic impact of soybean diseases in the United States over two decades

(2020) Ananda Y. Bandara et al.   PLoS One

WRKY genes family study reveals tissue-specific and stress-responsive TFs in wild potato species

(2020) Clizia Villano et al.   Scientific Reports

A GATA Transcription Factor from Soybean (Glycine max) Regulates Chlorophyll Biosynthesis and Suppresses Growth in the Transgenic Arabidopsis thaliana

(2020) Chanjuan Zhang et al.   Plants-Basel

Comment on ‘Hayai-Annotation Plants: an ultrafast and comprehensive functional gene annotation system in plants’: the importance of taking the GO graph structure into account

(2020) Michiel Van Bel et al.   BIOINFORMATICS

The Effects of Gene Duplication Modes on the Evolution of Regulatory Divergence in Wild and Cultivated Soybean

(2020) Na Zhao et al.   Frontiers in Genetics

The role of HD-Zip classItranscription factors in plant response to abiotic stresses

(2019) Shaohua Gong et al.   PHYSIOLOGIA PLANTARUM

SignalP 5.0 improves signal peptide predictions using deep neural networks

(2019) José Juan Almagro Armenteros et al.   NATURE BIOTECHNOLOGY

A GATA transcription factor PdGNC plays an important role in photosynthesis and growth in Populus

(2019) Yi An et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transcriptome and GWAS analyses reveal candidate gene for seminal root length of maize seedlings under drought stress

(2019) Jian Guo et al.   PLANT SCIENCE

Pangenomics Comes of Age: From Bacteria to Plant and Animal Applications

(2019) Agnieszka A. Golicz et al.   TRENDS IN GENETICS

Genomic and transcriptomic analyses of HD-Zip family transcription factors and their responses to abiotic stress in tea plant ( Camellia sinensis )

(2018) Wei Shen et al.   GENOMICS

UniProt: a worldwide hub of protein knowledge

(2018)   NUCLEIC ACIDS RESEARCH

PlantPAN3.0: a new and updated resource for reconstructing transcriptional regulatory networks from ChIP-seq experiments in plants

(2018) Chi-Nga Chow et al.   NUCLEIC ACIDS RESEARCH

WRKY transcription factors in plant responses to stresses

(2017) Jingjing Jiang et al.   Journal of Integrative Plant Biology

PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics

(2017) Michiel Van Bel et al.   NUCLEIC ACIDS RESEARCH

The sterol-binding activity of PATHOGENESIS-RELATED PROTEIN 1 reveals the mode of action of an antimicrobial protein

(2017) Jordi Gamir et al.   PLANT JOURNAL

Emerging Insights into the Functions of Pathogenesis-Related Protein 1

(2017) Susan Breen et al.   TRENDS IN PLANT SCIENCE

Abiotic Stresses Cause Differential Regulation of Alternative Splice Forms of GATA Transcription Factor in Rice

(2017) Priyanka Gupta et al.   Frontiers in Plant Science

PlantTFDB 4.0: toward a central hub for transcription factors and regulatory interactions in plants

(2016) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data

(2016) Guangchuang Yu et al.   Methods in Ecology and Evolution

Rice Stress Associated Protein 1 (OsSAP1) Interacts with Aminotransferase (OsAMTR1) and Pathogenesis-Related 1a Protein (OsSCP) and Regulates Abiotic Stress Responses

(2016) Kamakshi S. Kothari et al.   Frontiers in Plant Science

Daytime soybean transcriptome fluctuations during water deficit stress

(2015) Fabiana Aparecida Rodrigues et al.   BMC GENOMICS

The Phyre2 web portal for protein modeling, prediction and analysis

(2015) Lawrence A Kelley et al.   Nature Protocols

Ethylene Response Factors: A Key Regulatory Hub in Hormone and Stress Signaling

(2015) Maren Müller et al.   PLANT PHYSIOLOGY

Quantitative Peptidomics Study Reveals That a Wound-Induced Peptide from PR-1 Regulates Immune Signaling in Tomato

(2014) Y.-L. Chen et al.   PLANT CELL

An Acidic PATHOGENESIS-RELATED1 Gene of Oryza grandiglumis is Involved in Disease Resistance Response Against Bacterial Infection

(2014) Sang Hyun Shin et al.   Plant Pathology Journal

AP2/ERF family transcription factors in plant abiotic stress responses

(2011) Junya Mizoi et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Molecular characterization and genomic mapping of the pathogenesis-related protein 1 (PR-1) gene family in hexaploid wheat (Triticum aestivum L.)

(2011) Shunwen Lu et al.   MOLECULAR GENETICS AND GENOMICS

Genome sequence of the palaeopolyploid soybean

(2010) Jeremy Schmutz et al.   NATURE

PR-1 gene family of grapevine: a uniquely duplicated PR-1 gene from a Vitis interspecific hybrid confers high level resistance to bacterial disease in transgenic tobacco

(2010) Zhijian T. Li et al.   PLANT CELL REPORTS

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Together We Stand: Genes Cluster to Coordinate Regulation

(2008) Grigoris Amoutzias et al.   DEVELOPMENTAL CELL

Molecular and Functional Profiling of Arabidopsis Pathogenesis-Related Genes: Insights into Their Roles in Salt Response of Seed Germination

(2008) P. J. Seo et al.   PLANT AND CELL PHYSIOLOGY