Sequencing of non-virulent strains of Fusarium fujikuroi reveals genes putatively involved in bakanae disease of rice

Regulators of nitric oxide signaling triggered by host perception in a plant pathogen

(2020) Yi Ding et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Gibberellin Producer Fusarium fujikuroi: Methods and Technologies in the Current Toolkit

(2020) Yu-Ke Cen et al.   Frontiers in Bioengineering and Biotechnology

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline

(2019) Kai Blin et al.   NUCLEIC ACIDS RESEARCH

The ER Lumenal Hsp70 Protein FpLhs1 Is Important for Conidiation and Plant Infection in Fusarium pseudograminearum

(2019) Linlin Chen et al.   Frontiers in Microbiology

Different phenotypes, similar genomes: three newly sequenced Fusarium fujikuroi strains induce different symptoms in rice depending on temperature.

(2019) Edoardo Piombo et al.   PHYTOPATHOLOGY

Comparative genomics of geographically distant Fusarium fujikuroi isolates revealed two distinct pathotypes correlating with secondary metabolite profiles

(2017) Eva-Maria Niehaus et al.   PLoS Pathogens

Whole Genome Sequencing of Fusarium fujikuroi Provides Insight into the Role of Secretory Proteins and Cell Wall Degrading Enzymes in Causing Bakanae Disease of Rice

(2017) Bishnu M. Bashyal et al.   Frontiers in Plant Science

Comparative transcriptome and proteome analysis reveals a global impact of the nitrogen regulators AreA and AreB on secondary metabolism in Fusarium fujikuroi

(2017) Andreas Pfannmüller et al.   PLoS One

Signaling pathways for stress responses and adaptation inAspergillusspecies: stress biology in the post-genomic era

(2016) Daisuke Hagiwara et al.   BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY

Comparative transcriptome profiling of resistant and susceptible rice genotypes in response to the seedborne pathogen Fusarium fujikuroi

(2016) Slavica Matić et al.   BMC GENOMICS

Phylogeny, classification and metagenomic bioprospecting of microbial acetyl xylan esterases

(2016) Fiyinfoluwa A. Adesioye et al.   ENZYME AND MICROBIAL TECHNOLOGY

Host-preferential Fusarium graminearum gene expression during infection of wheat, barley, and maize

(2016) Linda J. Harris et al.   Fungal Biology

PHI-base: a new interface and further additions for the multi-species pathogen–host interactions database

(2016) Martin Urban et al.   NUCLEIC ACIDS RESEARCH

Mapping quantitative trait loci responsible for resistance to Bakanae disease in rice

(2016) R. Abdul Fiyaz et al.   Rice

Sealer: a scalable gap-closing application for finishing draft genomes

(2015) Daniel Paulino et al.   BMC BIOINFORMATICS

Genome Sequencing of Multiple Isolates Highlights Subtelomeric Genomic Diversity withinFusarium fujikuroi

(2015) Matteo Chiara et al.   Genome Biology and Evolution

The Role of Pathogen-Secreted Proteins in Fungal Vascular Wilt Diseases

(2015) Mara de Sain et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Jasmonic Acid, Abscisic Acid, and Salicylic Acid Are Involved in the Phytoalexin Responses of Rice to Fusarium fujikuroi, a High Gibberellin Producer Pathogen

(2015) Ilenia Siciliano et al.   JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY

Putative effector genes detected inFusarium oxysporumfrom natural ecosystems of Australia

(2015) L. O. Rocha et al.   PLANT PATHOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Antagonistic yeasts and thermotherapy as seed treatments to control Fusarium fujikuroi on rice

(2014) Slavica Matić et al.   BIOLOGICAL CONTROL

Impact of temperature stress and validamycin A on compatible solutes and fumonisin production in F. verticillioides: Role of trehalose-6-phosphate synthase

(2013) Beth A. Boudreau et al.   FUNGAL GENETICS AND BIOLOGY

Light affects fumonisin production in strains of Fusarium fujikuroi, Fusarium proliferatum, and Fusarium verticillioides isolated from rice

(2013) Slavica Matić et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Deciphering the Cryptic Genome: Genome-wide Analyses of the Rice Pathogen Fusarium fujikuroi Reveal Complex Regulation of Secondary Metabolism and Novel Metabolites

(2013) Philipp Wiemann et al.   PLoS Pathogens

Biosynthesis of Fusarubins Accounts for Pigmentation of Fusarium fujikuroi Perithecia

(2012) Lena Studt et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Conventional and real-time PCR for the identification of Fusarium fujikuroi and Fusarium proliferatum from diseased rice tissues and seeds

(2012) Maria Teresa Amatulli et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Molecular identification of Fusarium spp. associated with bakanae disease of rice in Italy and assessment of their pathogenicity

(2010) M. T. Amatulli et al.   PLANT PATHOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Genes, gene clusters, and biosynthesis of trichothecenes and fumonisins inFusarium

(2009) Nancy J. Alexander et al.   Toxin Reviews

MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences

(2008) S. Kumar et al.   BRIEFINGS IN BIOINFORMATICS

NCBI BLAST: a better web interface

(2008) M. Johnson et al.   NUCLEIC ACIDS RESEARCH

The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics

(2008) B. L. Cantarel et al.   NUCLEIC ACIDS RESEARCH

Population Structure of Fusarium fujikuroi from California Rice and Water Grass

(2008) L. L. A. Carter et al.   PHYTOPATHOLOGY