Genome-wide DNA methylation profiles provide insight into epigenetic regulation of red and white muscle development in Chinese perch Siniperca chuatsi

Editing DNA Methylation in Mammalian Embryos

(2020) Taiga Yamazaki et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Local DNA methylation helps to regulate muscle sirtuin 1 gene expression across seasons and advancing age in gilthead sea bream (Sparus aurata)

(2020) Paula Simó-Mirabet et al.   Frontiers in Zoology

Gene body methylation facilitates the transcription of CTSG via antisense lncRNA AL136018.1 in dermatomyositic myoideum

(2020) Ying Liang et al.   CELL BIOLOGY INTERNATIONAL

Molecular characterisation and transcriptional regulation of muscle growth regulatory factors myogenin and myogenic factor 6 in the Trans-Himalayan cyprinid fish Schizothorax richardsonii

(2019) Manchi Rajesh et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Differences in the fast muscle methylome provide insight into sex-specific epigenetic regulation of growth in Nile tilapia during early stages of domestication

(2019) Tomasz Podgorniak et al.   Epigenetics

Pan-cancer genomic analysis links 3’UTR DNA methylation with increased gene expression in T cells

(2019) Michael H. McGuire et al.   EBioMedicine

Epigenome-wide skeletal muscle DNA methylation profiles at the background of distinct metabolic types and ryanodine receptor variation in pigs

(2019) Siriluck Ponsuksili et al.   BMC GENOMICS

Oxidative stress and mitochondrial dysfunction mediated Cd-induced hepatic lipid accumulation in zebrafish Danio rerio

(2018) Ya-Xiong Pan et al.   AQUATIC TOXICOLOGY

Characterization and functional inferences of a genome-wide DNA methylation profile in the loin (longissimus dorsi) muscle of swine

(2018) Woonsu Kim et al.   ASIAN-AUSTRALASIAN JOURNAL OF ANIMAL SCIENCES

Consistent inverse correlation between DNA methylation of the first intron and gene expression across tissues and species

(2018) Dafni Anastasiadi et al.   Epigenetics & Chromatin

Analysis of Titin in Red and White Muscles: Crucial Role on Muscle Contractions Using a Fish Model

(2018) Ming-Ping Wu et al.   Biomed Research International

DNA methylation assessment from human slow- and fast-twitch skeletal muscle fibers

(2017) Gwénaëlle Begue et al.   JOURNAL OF APPLIED PHYSIOLOGY

Proteomic and microRNA Transcriptome Analysis revealed the microRNA-SmyD1 network regulation in Skeletal Muscle Fibers performance of Chinese perch

(2017) WuYing Chu et al.   Scientific Reports

Genetic background and embryonic temperature affect DNA methylation and expression of myogenin and muscle development in Atlantic salmon (Salmo salar)

(2017) Erik Burgerhout et al.   PLoS One

DNA methylation changes in endometrium and correlation with gene expression during the transition from pre-receptive to receptive phase

(2017) Viktorija Kukushkina et al.   Scientific Reports

Differential methylation analysis for BS-seq data under general experimental design

(2016) Yongseok Park et al.   BIOINFORMATICS

INVITED REVIEW: Inhibitors of myostatin as methods of enhancing muscle growth and development1

(2016) P. R. Chen et al.   JOURNAL OF ANIMAL SCIENCE

DNA methylation signature of intergenic region involves in nucleosome remodeler DDM1-mediated repression of aberrant gene transcriptional read-through

(2016) Xiaojing Yan et al.   Journal of Genetics and Genomics

Genome-wide methylation analysis identified sexually dimorphic methylated regions in hybrid tilapia

(2016) Zi Yi Wan et al.   Scientific Reports

Genome-wide DNA methylation profiles changes associated with constant heat stress in pigs as measured by bisulfite sequencing

(2016) Yue Hao et al.   Scientific Reports

Genome-wide landscape of DNA methylomes and their relationship with mRNA and miRNA transcriptomes in oxidative and glycolytic skeletal muscles

(2016) Linyuan Shen et al.   Scientific Reports

Molecular cloning and tissue expression of uncoupling protein 1, 2 and 3 genes in Chinese perch (Siniperca chuatsi)

(2015) Zheng-Yong Wen et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

Focal adhesion kinase and its role in skeletal muscle

(2015) Zachary A. Graham et al.   JOURNAL OF MUSCLE RESEARCH AND CELL MOTILITY

PAX3 and PAX7 as upstream regulators of myogenesis

(2015) Margaret Buckingham et al.   SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY

DNA methylation dynamics in muscle development and disease

(2015) Elvira Carrió   Frontiers in Aging Neuroscience

Predicting genome-wide DNA methylation using methylation marks, genomic position, and DNA regulatory elements

(2015) Weiwei Zhang et al.   GENOME BIOLOGY

Genome-wide DNA methylation changes in skeletal muscle between young and middle-aged pigs

(2014) Long Jin et al.   BMC GENOMICS

Methodological aspects of whole-genome bisulfite sequencing analysis

(2014) S. Adusumalli et al.   BRIEFINGS IN BIOINFORMATICS

The microRNA Signature in Response to Nutrient Restriction and Refeeding in Skeletal Muscle of Chinese Perch (Siniperca chuatsi)

(2014) Xin Zhu et al.   MARINE BIOTECHNOLOGY

Genome-wide DNA Methylation Profiles and Their Relationships with mRNA and the microRNA Transcriptome in Bovine Muscle Tissue (Bos taurine)

(2014) Yong-Zhen Huang et al.   Scientific Reports

Skeletal muscle hypertrophy and regeneration: interplay between the myogenic regulatory factors (MRFs) and insulin-like growth factors (IGFs) pathways

(2013) Nadège Zanou et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Temperature affects methylation of themyogeninputative promoter, its expression and muscle cellularity in Senegalese sole larvae

(2013) Catarina Campos et al.   Epigenetics

Integrated analysis of genome-wide DNA methylation and gene expression profiles in molecular subtypes of breast cancer

(2013) J.-K. Rhee et al.   NUCLEIC ACIDS RESEARCH

High Resolution Methylome Map of Rat Indicates Role of Intragenic DNA Methylation in Identification of Coding Region

(2012) Satish Sati et al.   PLoS One

Growth and the regulation of myotomal muscle mass in teleost fish

(2011) I. A. Johnston et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Characterization and ontogenetic expression analysis of the myosin light chains from the fast white muscle of mandarin fish Siniperca chuatsi

(2011) W. Y. Chu et al.   JOURNAL OF FISH BIOLOGY

DNA Methylation of the First Exon Is Tightly Linked to Transcriptional Silencing

(2011) Fabienne Brenet et al.   PLoS One

Mechanisms of HDA6-mediated rRNA gene silencing: suppression of intergenic Pol II transcription and differential effects on maintenance versus siRNA-directed cytosine methylation

(2010) K. W. Earley et al.   GENES & DEVELOPMENT

Identification and Analysis of Muscle-Related Protein Isoforms Expressed in the White Muscle of the Mandarin Fish (Siniperca chuatsi)

(2010) Guoqiang Zhang et al.   MARINE BIOTECHNOLOGY

Quantitative expression of myogenic regulatory factors MyoD and myogenin in pacu (Piaractus mesopotamicus) skeletal muscle during growth

(2010) Fernanda Losi Alves de Almeida et al.   MICRON

Genome-Wide Evolutionary Analysis of Eukaryotic DNA Methylation

(2010) A. Zemach et al.   SCIENCE

Diverse roles of the actin cytoskeleton in striated muscle

(2009) Anthony J. Kee et al.   JOURNAL OF MUSCLE RESEARCH AND CELL MOTILITY

Regulation of Slow and Fast Muscle Myofibrillogenesis by Wnt/β-Catenin and Myostatin Signaling

(2009) Jin-Ming Tee et al.   PLoS One

Methods in DNA methylation profiling

(2009) Tao Zuo et al.   Epigenomics

A chronic increase in physical activity inhibits fed-state mTOR/S6K1 signaling and reduces IRS-1 serine phosphorylation in rat skeletal muscle

(2008) Erin L. Glynn et al.   Applied Physiology Nutrition and Metabolism