Article
Biology
Yao Chen, Xiaoyang Zhang, Mingyu Ma, Yingrui Zhuang, Lirong Chang, Luyang Xiao, Gaoge Wang
Summary: This study found that PpX-8 extracellular compounds in Saccharina japonica infected by PpX-8 can induce programmed cell death and trigger active defense responses. These results indicate that seaweeds and higher plants have conservative active defense responses against pathogenic bacteria, and lay the foundation for further investigation of the virulence mechanisms of PpX-8.
Article
Fisheries
Qin Yang, Yingrui Zhuang, Mahasweta Saha, Qiying Qiu, Defu Chen, Lirong Chang, Luyang Xiao, Gaoge Wang
Summary: In this study, a opportunistic pathogenic bacterium, Pseudomonas aeruginosa MSLj6-25, was isolated from healthy matured Saccharina japonica. The pathogenicity of P. aeruginosa MSLj6-25 was confirmed by infection assay, showing it can cause green-rotten disease. The identification and characterization of this bacterium provide important knowledge for disease diagnosis and control in S. japonica.
Article
Environmental Sciences
Fan Ling, Suhelen Egan, Yingrui Zhuang, Lirong Chang, Luyang Xiao, Qin Yang, Gaoge Wang
Summary: In this study, we investigated the dynamic shifts in the composition of the epibacterial communities of commercially farmed brown seaweed Saccharina japonica with disease progression. Our results showed that the alpha diversity was significantly higher in the control group than in the infected group. There was a significant shift in the composition and predicted functions of the epibacterial communities in both control and infected groups. Indicator species belonging to Stenotrophomonas, Pseudomonas and Sphingomona were significantly higher in the control group, while Vibrio, Pseudoalteromonas and Colwellia were keystone taxa in the infected group.
FRONTIERS IN MARINE SCIENCE
(2022)
Article
Biotechnology & Applied Microbiology
Rafiq Ahmad, Yao Chen, Yingrui Zhuang, Qiying Qiu, Defu Chen, Mahasweta Saha, Hongyan Wu, Gaoge Wang
Summary: A Gram-positive bacterium XP-2 was isolated from diseased Saccharina japonica, causing green-rotten disease in healthy juvenile sporophytes. Analysis showed that XP-2 was closely related to Exiguobacterium oxidotolerans 12280(T), and its pathogenicity was identified by Koch's Postulate under laboratory conditions. This study enriched the list of pathogenic bacteria in commercially cultivated seaweeds and laid a foundation for further research on the virulence mechanisms of these pathogens.
JOURNAL OF APPLIED PHYCOLOGY
(2021)
Article
Chemistry, Medicinal
Withanage Prasadini Wasana, Amal Senevirathne, Chamilani Nikapitiya, Tae-Yang Eom, Youngdeuk Lee, Jong-Soo Lee, Do-Hyung Kang, Chulhong Oh, Mahanama De Zoysa
Summary: A marine bacterial strain, Pseudoalteromonas xiamenensis S1131, isolated from seawater, showed beneficial probiotic effects, improving disease tolerance in zebrafish model system. The strain enhanced host resistance against pathogenic bacteria by suppressing pro-inflammatory markers and upregulating heat shock protein and mucin genes. The antibacterial activity of P. xiamenensis may be related to mucin overexpression, which inhibits bacterial biofilm formation and enhances macrophage uptake.
Article
Environmental Sciences
Yongwei Yan, Shanshan Wang, Kuimei Liu, Zhaolan Mo, Huichao Yang, Xiaojun Rong, Jie Li
Summary: In this study, the severity of malformation disease (MD) in Saccharina japonica was evaluated. The study found that longer light exposure and both unmatured and overmatured parent kelp were significantly correlated with higher MD severity. Different MD severities were associated with different epibacterial communities. Functional comparisons revealed that longer light exposure led to a depletion in development and regeneration, while overmatured parent kelp resulted in a depletion in glycan biosynthesis and metabolism. The study enhances our understanding of the factors associated with MD severity and the potential roles of epimicrobiome in determining the disease severity.
FRONTIERS IN MARINE SCIENCE
(2023)
Article
Chemistry, Medicinal
Yingjuan Liu, Weihua Jin, Zhenzhen Deng, Quanbin Zhang, Jing Wang
Summary: The fucoidan-derived glucuronomannan oligosaccharide GM2 demonstrated significant neuroprotective effects in Parkinson's disease, improving cell viability, reducing apoptosis, enhancing autophagy, and ultimately reducing dopaminergic neuron loss.
Article
Engineering, Marine
Yongwei Yan, Shanshan Wang, Jie Li, Fuli Liu, Zhaolan Mo
Summary: This study analyzed the bacterial communities associated with GRD-infected seedlings in two hatcheries in Northern China and found different abundances of bacterial taxa associated with seedlings of varying disease severity. Predicted bacterial functions also differed between seedlings with mild and severe disease.
JOURNAL OF MARINE SCIENCE AND ENGINEERING
(2022)
Article
Food Science & Technology
Kuan Lu, Lin Liu, Pengcheng Lin, Xiufang Dong, Laixue Ni, Hongxia Che, Wancui Xie
Summary: Saccharina japonica, a brown macro-alga, has potential health benefits including antioxidant and anti-inflammatory activities, which may improve inflammatory bowel diseases.
Article
Microbiology
Wei Ren, Bingqing Xue, Feifei Cao, Hao Long, Yanhua Zeng, Xiang Zhang, Xiaoni Cai, Aiyou Huang, Zhenyu Xie
Summary: Vibrio harveyi is a dominant pathogen in mariculture, and the biocontrol of this pathogen using antagonistic probiotics is a challenging task. Pseudoalteromonas piscicida WCPW15003 has been found to effectively antagonize V. harveyi and protect mariculture animals from infection. This study investigated the molecular mechanisms of antagonism, revealing that WCPW15003 downregulated certain metabolic pathways and upregulated others, leading to a competitive advantage against V. harveyi.
MICROBIOLOGY SPECTRUM
(2022)
Article
Microbiology
Mingyu Ma, Yingrui Zhuang, Lirong Chang, Luyang Xiao, Qin Lin, Qiying Qiu, Defu Chen, Suhelen Egan, Gaoge Wang
Summary: Microbiome manipulation is a way to mitigate diseases in aquaculture. A beneficial bacterium, Vibrio alginolyticus X-2, has been identified to significantly reduce the risk of bleaching disease in commercially farmed seaweed. This study provides insights into disease control in farmed Saccharina japonica through the application of beneficial bacteria.
Article
Biochemistry & Molecular Biology
Van Thi Ai Tran, You Jung Kang, Hyun-Kyoung Kim, Hyung-Ryong Kim, Hansang Cho
Summary: Porphyromonas gingivalis, a gram-negative bacterium in the human oral cavity, may contribute to the development of chronic periodontitis and neurological diseases by inducing neuroinflammation and neurodegeneration.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Article
Immunology
Matthew C. Surdel, Beth L. Hahn, Phillip N. Anderson, Jenifer Coburn
Summary: This study reveals the role of LIC13411 in the pathogenesis of Leptospira spp. and identifies it as a potential prophylactic and therapeutic target, implicating its involvement in the dissemination to multiple organs.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY
(2022)
Article
Plant Sciences
James T. Tambong, Renlin Xu, Diane Cuppels, Julie Chapados, Suzanne Gerdis, Jackson Eyres, Adam Koziol, Jeremy Dettman
Summary: This study reports whole-genome resources of 89 Xanthomonas strains, providing valuable insights into the global population structure and evolution of these pathogens.
Article
Medicine, Research & Experimental
Jin Imai, Hitoshi Ichikawa, Sho Kitamoto, Jonathan L. Golob, Motoki Kaneko, Junko Nagata, Miho Takahashi, Merritt G. Gillilland, Rika Tanaka, Hiroko Nagao-Kitamoto, Atsushi Hayashi, Kohei Sugihara, Shrinivas Bishu, Shingo Tsuda, Hiroyuki Ito, Seiichiro Kojima, Kazunari Karakida, Masashi Matsushima, Takayoshi Suzuki, Katsuto Hozumi, Norihito Watanabe, William Giannobile, Takayuki Shirai, Hidekazu Suzuki, Nobuhiko Kamada
Summary: The study found that in patients with ulcerative colitis (UC) and Crohn's disease (CD), the gut microbiome was more similar to the oral microbiome, indicating increased ectopic gut colonization by oral bacteria in IBD patients. Incipient periodontitis did not significantly affect the clinical outcomes of UC and CD patients, but early periodontitis may be associated with worse clinical symptoms in some CD patients.
Article
Biodiversity Conservation
Mahasweta Saha, Francisco R. Barboza, Paul J. Somerfield, Balsam Al-Janabi, Miriam Beck, Janina Brakel, Maysa Ito, Christian Pansch, Jennifer C. Nascimento-Schulze, Stina Jakobsson Thor, Florian Weinberger, Yvonne Sawall
GLOBAL CHANGE BIOLOGY
(2020)
Article
Microbiology
Simeon Choo, Erik Borchert, Jutta Wiese, Mahasweta Saha, Sven Kuenzel, Florian Weinberger, Ute Hentschel
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
(2020)
Article
Environmental Sciences
Chi Guan, Mahasweta Saha, Florian Weinberger
FRONTIERS IN MARINE SCIENCE
(2020)
Article
Engineering, Environmental
Xiansheng Zhang, Dong Xu, Shujie Huang, Shaohua Wang, Wentao Han, Chengwei Liang, Yan Zhang, Xiao Fan, Xiaowen Zhang, Yitao Wang, Wei Wang, Suhelen Egan, Mahasweta Saha, Fang Li, Naihao Ye
JOURNAL OF HAZARDOUS MATERIALS
(2020)
Editorial Material
Plant Sciences
Ruth Schmidt, Mahasweta Saha
Summary: The response of holobionts to climate change stressors may be influenced by shifts in the microbiota and infochemical-mediated communication. Complex interactions between holobionts in the rhizosphere of plants and the eco-chemosphere of seaweeds play a crucial role in driving their responses to climate change stressors. Investigation of infochemicals is essential in understanding holobiont response to climate change across terrestrial and aquatic ecosystems.
Article
Biotechnology & Applied Microbiology
Qi Han, Xiaoyang Zhang, Lirong Chang, Luyang Xiao, Rafiq Ahmad, Mahasweta Saha, Hongyan Wu, Gaoge Wang
Summary: The study investigated the epibacterial community associated with different developmental stages of commercially cultivated brown kelp Saccharina japonica. It found that there were differences in the diversity, composition, and metabolic functions of the epiphytic bacterial communities among mature sporophytes, 1.5- and 2.0-month-old sporelings, and juvenile sporophytes. Further analysis revealed that more metabolic functions were present in 2-month-old sporelings and mature sporophytes, indicating developmental stage-dependent changes in the epibacterial communities.
JOURNAL OF APPLIED PHYCOLOGY
(2021)
Article
Microbiology
Mahasweta Saha, Shawn Dove, Florian Weinberger
Review
Plant Sciences
Mahasweta Saha, Pauline Gilon, Francois Verheggen
Summary: Organisms in both terrestrial and aquatic realms communicate and interact through volatile and non-volatile infochemicals. While plant leaf volatiles have been well-studied for mediating microbial interactions, seaweed volatiles have been primarily investigated for their roles in climate regulation. However, evidence suggests that seaweed volatiles may play important ecological functions in mediating interactions with microbes on their surface, similar to plant leaf volatiles. Further research is needed to explore the detailed mechanisms of volatile-mediated interactions on seaweed surfaces.
JOURNAL OF ECOLOGY
(2021)
Article
Biotechnology & Applied Microbiology
Rafiq Ahmad, Yao Chen, Yingrui Zhuang, Qiying Qiu, Defu Chen, Mahasweta Saha, Hongyan Wu, Gaoge Wang
Summary: A Gram-positive bacterium XP-2 was isolated from diseased Saccharina japonica, causing green-rotten disease in healthy juvenile sporophytes. Analysis showed that XP-2 was closely related to Exiguobacterium oxidotolerans 12280(T), and its pathogenicity was identified by Koch's Postulate under laboratory conditions. This study enriched the list of pathogenic bacteria in commercially cultivated seaweeds and laid a foundation for further research on the virulence mechanisms of these pathogens.
JOURNAL OF APPLIED PHYCOLOGY
(2021)
Article
Biochemistry & Molecular Biology
Christina C. Roggatz, Jorg D. Hardege, Mahasweta Saha
Summary: Marine macroalgae play an important role in marine coastal habitats, using chemical compounds to minimize colonization by harmful organisms. Recent research suggests that pH conditions can impact the functionality of these compounds. Most compounds are unaffected by pH, but those containing phenolic and amine groups are particularly sensitive. Certain algae species rely heavily on pH-sensitive compounds for their chemical defense.
JOURNAL OF CHEMICAL ECOLOGY
(2022)
Article
Ecology
Jiasui Li, Florian Weinberger, Mahasweta Saha, Marwan E. Majzoub, Suhelen Egan
Summary: The development of marine probiotics has been limited, with a focus on farmed animals rather than seaweeds. This study demonstrates that non-endemic probiotics may be more effective in preventing diseases in certain seaweeds compared to endemic probiotics. The potential of utilizing probiotics that can function across different hosts to mitigate the impact of emerging marine diseases is highlighted.
Article
Biodiversity Conservation
Christina C. Roggatz, Mahasweta Saha, Solene Blanchard, Paula Schirrmacher, Patrick Fink, Francois Verheggen, Jorg D. Hardege
Summary: Chemical communication plays a crucial role in ecological interactions, but climate change can disrupt these interactions by affecting the transmission of information. This opinion piece illustrates, through examples, the similar patterns of climate change impacts across different domains and proposes a systematic approach to address knowledge gaps.
GLOBAL CHANGE BIOLOGY
(2022)
Correction
Biochemistry & Molecular Biology
Christina C. Roggatz, Jorg D. Hardege, Mahasweta Saha
JOURNAL OF CHEMICAL ECOLOGY
(2022)
Article
Biology
Mahasweta Saha, Patrick Fink
Summary: This review discusses the ecological roles of volatile compounds from freshwater and marine microalgae and macroalgae. The functions of these compounds range from intraspecific communication to defence against competitors and predators. Despite current understanding, there are still knowledge gaps and emerging questions in algal volatile research.
BIOLOGICAL REVIEWS
(2022)
Article
Fisheries
Hunter S. Bailey, Ashley N. Fincannon, Lee A. Fuiman
Summary: This study investigated the transfer of fatty acids from broodstock diets to eggs and the time needed for the eggs to equilibrate to the diet in Southern flounder. The findings indicate that different diet treatments significantly affect the fatty acid composition of eggs, and it takes 8-16 weeks for the eggs to adapt to changes in the adult diet. These results are important for improving broodstock diets and feeding protocols in stock-enhancement programs.
Article
Fisheries
Yu Liu, Mingtao Lei, Hector Victor, Yan Wang
Summary: This study confirms the feasibility of replacing raw fish diet with a formulated diet in commercial farming of large yellow croaker, which can increase fish survival and yield, and reduce feed cost and body lipid deposition.
Article
Fisheries
Xiaoyan Zhang, Lize San, Yucong Yang, Yuehong Tao, Jiangong Ren, Yufeng Liu, Zhongwei He, Jiashuo Di, Ziteng Pei, Guixing Wang, Jilun Hou
Summary: Gynogenesis is an effective technique for establishing homogeneous lines and confirming potential chromosomal mechanisms of sex determination in fish. This study successfully induced gynogenetic families in Thamnaconus modestus and established a complete method for gynogenesis induction.
Article
Fisheries
Julieta C. Martinelli, Megan Considine, Helen R. Casendino, Carolyn M. Tarpey, Isadora Jimenez-Hidalgo, Jacqueline L. Padilla-Gamino, Teri L. King, Lorenz Hauser, Steven Rumrill, Chelsea L. Wood
Summary: Shell-boring polychaetes have caused significant damage to mariculture operations worldwide, particularly in the US Pacific region. This study provides a comprehensive dataset on the prevalence, species distribution, and environmental associations of these parasites, highlighting the impact of season, culturing methods, and environmental factors on infestation.
Article
Fisheries
Juan Gao, Xueshan Li, Kangle Lu, Kai Song, Jian Zhang, Ling Wang, Chunxiao Zhang
Summary: This study investigated the effects of dietary protein levels on growth performance, antioxidant capacity, digestive enzyme activity, and metamorphosis rate of bullfrog tadpoles. The optimal dietary protein level for bullfrog tadpoles was estimated to be 42.49%-46.50% of the diet.
Article
Fisheries
Qiang Li, Lijun Duan, Dongsheng Jin, Yuxin Chen, Yirong Lou, Qianjin Zhou, Zhongjie Xu, Fangjie Chen, Hongxian Chen, Guizong Xu, Maocang Yan, Guanjun Yang, Jianfei Lu, Yanjun Zhang, Jiong Chen
Summary: This study developed a centrifugal microfluidic chip with on-chip RPA to detect five pathogenic microorganisms. The chip enabled the parallel analysis of six genetic markers from a single sample and allowed for the highly automated detection of multiple samples. Compared with PCR and DNA sequencing, the on-chip RPA assay showed high sensitivity and specificity for detecting multiple pathogens in shrimp aquaculture.
Article
Fisheries
Xingchen Huo, Pengxu Wang, Fengxia Zhao, Qian Liu, Qingqing Tian, Lingjie Tang, Maolin Lv, Zhaohui Wei, Chunrong Yang, Jianguo Su
Summary: Bacterial diseases in aquaculture ponds have negative effects on sustainable development. The use of composite I20 biotherapy has been shown to effectively treat bacterial diseases in bullfrog ponds, providing a new strategy for controlling bacterial diseases in aquaculture.
Article
Fisheries
Peng Yin, Takaya Saito, Per Gunnar Fjelldal, Bjorn Tharandur Bjornsson, Sofie Charlotte Remo, Sandeep Sharma, Rolf Erik Olsen, Kristin Hamre
Summary: This study aims to investigate the effect of seasonal changes in temperature and photoperiod on the redox metabolism of Atlantic salmon at the molecular level. The research findings suggest that the changing photoperiod and temperature influenced the redox metabolism of Atlantic salmon, highlighting the importance of oxidative status in the ecological implications.
Article
Fisheries
Nicholas Oppong Mensah, Jeffery Kofi Asare, Emmanuel Tetteh-Doku Mensah, Ernest Christlieb Amrago, Frank Osei Tutu, Anthony Donkor
Summary: This study investigates aquaculture farmers' preference for climate-smart aquaculture insurance products, the challenges they face, and their preferred insurance coverage. The results show that farmers prefer Climate-Induced Aquaculture Stock Mortality Insurance and the most significant constraint is the delay in claim settlement.
Article
Fisheries
Qiu-Ping Chai, Pei Wu, Wei-Dan Jiang, Yang Liu, Hong-Mei Ren, Xiao-Wan Jin, Lin Feng, Xiao-Qiu Zhou
Summary: The study found that appropriate levels of potassium diformate (KDF) can enhance the immune defense and mediate the inflammatory process in fish, possibly through the regulation of T cell differentiation via JAK-STAT and NF-kappa B signaling pathways.
Article
Fisheries
Tian Zhu, Haomin Jia, Haopeng Zhang, Yujing Xiao, Cui Han, Jiaxin Yang
Summary: Chicken manure has significant effects on the cultivation of Chlorella and rotifers. The optimal amount of chicken manure extract for continuous cultivation is 10 mLL-1. Chicken manure can promote the growth of Chlorella and improve the fatty acid composition, indirectly enhancing the growth condition and fatty acid content of rotifers.
Article
Fisheries
Zheng Luo, Yang Yu, Zhenning Bao, Fuhua Li
Summary: This study analyzed the heritability and genetic correlation of two growth traits in Pacific white shrimp and evaluated the genomic prediction using different genomic selection models. The results showed that the NeuralNet model had the highest prediction accuracy and better prospects for predicting shrimp growth traits.
Article
Fisheries
Alberto Ruiz, Ignasi Sanahuja, Karl B. Andree, Dolors Furones, Paul G. Holhorea, Josep A. Calduch-Giner, Jose J. Pastor, Marc Vinas, Jaume Perez-Sanchez, Sofia Morais, Enric Gisbert
Summary: Supplementing diets with a combination of spice oleoresins can reduce lipid accumulation and inflammation in farmed fish. The combination of spice oleoresins also has an immunomodulatory effect on the fish's intestinal immune system, potentially offering anti-inflammatory benefits.
Article
Fisheries
Beibei Zhao, Renhui Mei, Le Li, Di Hu, Lei Li
Summary: This study reveals that JfCXCL8_L1a and JfCXCL8_L1b have different immune pathways, and JfCXCL8_L1b plays a significant role in enhancing the adaptive immunity of T cell-dependent antigen.
Article
Fisheries
Yuhang Liu, Danying Cao, Nan Wu, Xuyang Zhao, Qingsong Zhu, Lian Su, Fatima Altaf, Qianqian Zhang, Haokun Liu, Yongming Li, Bruno Hamish Unger, Yingyin Cheng, Wanting Zhang, Aihua Li, Yaping Wang, Xiao-Qin Xia
Summary: Based on previous research, sinomenine has been found to protect mucosal immunity in farmed fish species by preventing intestinal pathological changes and regulating gene expression related to inflammation. It also enhances immune homeostasis and controls the growth of pathogenic bacteria.