Desiderata for the development of next-generation electronic health record phenotype libraries

PheMap: a multi-resource knowledge base for high-throughput phenotyping within electronic health records

(2020) Neil S Zheng et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Facilitating phenotype transfer using a common data model

(2019) George Hripcsak et al.   JOURNAL OF BIOMEDICAL INFORMATICS

PheValuator: Development and evaluation of a phenotype algorithm evaluator

(2019) Joel N. Swerdel et al.   JOURNAL OF BIOMEDICAL INFORMATICS

OUP accepted manuscript

(2018)   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

The research data management platform (RDMP): A novel, process driven, open-source tool for the management of longitudinal cohorts of clinical data

(2018) Thomas Nind et al.   GigaScience

Templates as a method for implementing data provenance in decision support systems

(2017) Vasa Curcin et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Single-reviewer electronic phenotyping validation in operational settings: Comparison of strategies and recommendations

(2017) Polina Kukhareva et al.   JOURNAL OF BIOMEDICAL INFORMATICS

Enabling phenotypic big data with PheNorm

(2017) Sheng Yu et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability

(2016) Jacqueline C Kirby et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Learning statistical models of phenotypes using noisy labeled training data

(2016) Vibhu Agarwal et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

The FAIR Guiding Principles for scientific data management and stewardship

(2016) Mark D. Wilkinson et al.   Scientific Data

Validation of Electronic Health Record Phenotyping of Bipolar Disorder Cases and Controls

(2015) Victor M. Castro et al.   AMERICAN JOURNAL OF PSYCHIATRY

Desiderata for computable representations of electronic health records-driven phenotype algorithms

(2015) Huan Mo et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

Operational definitions of asthma in recent epidemiological studies are inconsistent

(2014) Ana Sá-Sousa et al.   Clinical and Translational Allergy

A multi-layered framework for disseminating knowledge for computer-based decision support

(2011) A. A. Boxwala et al.   JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION

PheWAS: demonstrating the feasibility of a phenome-wide scan to discover gene-disease associations

(2010) J. C. Denny et al.   BIOINFORMATICS