Coexistence of two blaCTX-M-14 genes in a blaNDM-5-carrying multidrug-resistant Escherichia coli strain recovered from a bloodstream infection in China

BacWGSTdb 2.0: a one-stop repository for bacterial whole-genome sequence typing and source tracking

(2020) Ye Feng et al.   NUCLEIC ACIDS RESEARCH

NDM Metallo-β-Lactamases and Their Bacterial Producers in Health Care Settings

(2019) Wenjing Wu et al.   CLINICAL MICROBIOLOGY REVIEWS

The global dissemination of bacterial infections necessitates the study of reverse genomic epidemiology

(2019) Zhi Ruan et al.   BRIEFINGS IN BIOINFORMATICS

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline

(2019) Kai Blin et al.   NUCLEIC ACIDS RESEARCH

Carbapenem-resistant Enterobacteriaceae in wildlife, food-producing, and companion animals: a systematic review

(2018) R. Köck et al.   CLINICAL MICROBIOLOGY AND INFECTION

CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins

(2018) David Couvin et al.   NUCLEIC ACIDS RESEARCH

IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets

(2017) Claire Bertelli et al.   NUCLEIC ACIDS RESEARCH

Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

(2017) Ryan R. Wick et al.   PLoS Computational Biology

High Prevalence of ChromosomalblaCTX-M-14in Escherichia coli Isolates PossessingblaCTX-M-14

(2016) Kouta Hamamoto et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

BacWGSTdb, a database for genotyping and source tracking bacterial pathogens

(2015) Zhi Ruan et al.   NUCLEIC ACIDS RESEARCH

Identification of acquired antimicrobial resistance genes

(2012) E. Zankari et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Easyfig: a genome comparison visualizer

(2011) M. J. Sullivan et al.   BIOINFORMATICS