Outbreaks of Root Rot Disease in Different Aged American Ginseng Plants Are Associated With Field Microbial Dynamics

Impacts of replanting American ginseng on fungal assembly and abundance in response to disease outbreaks

(2021) Li Ji et al.   ARCHIVES OF MICROBIOLOGY

Arbuscular mycorrhizal fungi biofertilizer improves American ginseng (Panax quinquefolius L.) growth under the continuous cropping regime

(2020) Ning Liu et al.   GEODERMA

Predicting disease occurrence with high accuracy based on soil macroecological patterns of Fusarium wilt

(2020) Jun Yuan et al.   ISME Journal

Rhizospheric microbiomes help Dongxiang common wild rice (Oryza rufipogon Griff.) rather than Leersia hexandra Swartz survive under cold stress

(2020) Shangqi Xu et al.   Archives of Agronomy and Soil Science

First report of root rot caused by Fusarium armeniacum on American ginseng in China

(2020) Ximei Zhang et al.   PLANT DISEASE

Changes in the Microbiome in the Soil of an American Ginseng Continuous Plantation

(2020) Jiguang Zhang et al.   Frontiers in Plant Science

Changes in the soil microbial community are associated with the occurrence of Panax quinquefolius L. root rot diseases

(2019) Jinglong Jiang et al.   PLANT AND SOIL

Highly connected taxa located in the microbial network are prevalent in the rhizosphere soil of healthy plant

(2019) Xinqi Huang et al.   BIOLOGY AND FERTILITY OF SOILS

Microbial network and soil properties are changed in bacterial wilt susceptible soil

(2019) Gaofu Qi et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Competitive interaction with keystone taxa induced negative priming under biochar amendments

(2019) Lijun Chen et al.   Microbiome

Deciphering microbial diversity associated with Fusarium wilt-diseased and disease-free banana rhizosphere soil

(2019) Dengbo Zhou et al.   BMC MICROBIOLOGY

Effect of phenolic acids from banana root exudates on root colonization and pathogen suppressive properties of Bacillus amyloliquefaciens NJN-6

(2018) Jun Yuan et al.   BIOLOGICAL CONTROL

Community Structure of Rhizomicrobiomes in Four Medicinal Herbs and Its Implication on Growth Management

(2018) S. Shi et al.   MICROBIOLOGY

First Report of Botrytis pelargonii Causing Postharvest Gray Mold on Fresh Ginseng Roots in China

(2018) Bao Hui Lu et al.   PLANT DISEASE

Effects of haze pollution on microbial community changes and correlation with chemical components in atmospheric particulate matter

(2018) Yujiao Sun et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Cylindrocarpon destructans/Ilyonectria radicicola -species complex: Causative agent of ginseng root-rot disease and rusty symptoms

(2018) Mohamed El-Agamy Farh et al.   Journal of Ginseng Research

Effects of phenolic acids from ginseng rhizosphere on soil fungi structure, richness and diversity in consecutive monoculturing of ginseng

(2018) Zibo Li et al.   SAUDI JOURNAL OF BIOLOGICAL SCIENCES

Rhizosphere microbiota assemblage associated with wild and cultivated soybeans grown in three types of soil suspensions

(2018) Chunling Chang et al.   Archives of Agronomy and Soil Science

Rhizospheric microbial communities are driven by Panax ginseng at different growth stages and biocontrol bacteria alleviates replanting mortality

(2018) Linlin Dong et al.   Acta Pharmaceutica Sinica B

‘NetShift’: a methodology for understanding ‘driver microbes’ from healthy and disease microbiome datasets

(2018) Bhusan K. Kuntal et al.   ISME Journal

Response of microbial communities and enzyme activities to amendments in saline-alkaline soils

(2018) Shaohua Shi et al.   APPLIED SOIL ECOLOGY

MicrobiomeAnalyst: a web-based tool for comprehensive statistical, visual and meta-analysis of microbiome data

(2017) Achal Dhariwal et al.   NUCLEIC ACIDS RESEARCH

Distinct roles for soil fungal and bacterial communities associated with the suppression of vanilla Fusarium wilt disease

(2017) Wu Xiong et al.   SOIL BIOLOGY & BIOCHEMISTRY

Microbial community composition is related to soil biological and chemical properties and bacterial wilt outbreak

(2017) Rui Wang et al.   Scientific Reports

Root biomass and exudates link plant diversity with soil bacterial and fungal biomass

(2017) Nico Eisenhauer et al.   Scientific Reports

The succession pattern of soil microbial communities and its relationship with tobacco bacterial wilt

(2016) Jiaojiao Niu et al.   BMC MICROBIOLOGY

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

(2016) Nhu H. Nguyen et al.   Fungal Ecology

Fungal biotransformation of chlorogenic and caffeic acids by Fusarium graminearum: New insights in the contribution of phenolic acids to resistance to deoxynivalenol accumulation in cereals

(2016) Léa Gauthier et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Functional traits dominate the diversity-related selection of bacterial communities in the rhizosphere

(2016) Yan Yan et al.   ISME Journal

First Report of Gray Mold Caused by Botrytis cinerea on Red Raspberry (Rubus idaeus) in Korea

(2016) J. Y. Kim et al.   PLANT DISEASE

Mixed Phenolic Acids Mediated Proliferation of Pathogens Talaromyces helicus and Kosakonia sacchari in Continuously Monocultured Radix pseudostellariae Rhizosphere Soil

(2016) Hongmiao Wu et al.   Frontiers in Microbiology

Soil bacterial and fungal community dynamics in relation to Panax notoginseng death rate in a continuous cropping system

(2016) Linlin Dong et al.   Scientific Reports

Microbial and biochemical basis of a Fusarium wilt-suppressive soil

(2015) Jae-Yul Cha et al.   ISME Journal

What lies beneath: belowground defense strategies in plants

(2015) Barbara De Coninck et al.   TRENDS IN PLANT SCIENCE

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Bioavailability of theFusariumtoxin deoxynivalenol (DON) from wheat straw and chaff in pigs

(2013) Dirk Rohweder et al.   ARCHIVES OF ANIMAL NUTRITION

Use of Chaetomium globosum for biocontrol of potato late blight disease

(2013) V. Shanthiyaa et al.   CROP PROTECTION

Manipulating the soil microbiome to increase soil health and plant fertility

(2012) Jacqueline M. Chaparro et al.   BIOLOGY AND FERTILITY OF SOILS

The production of ginsenosides in hairy root cultures of American Ginseng, Panax quinquefolium L. and their antimicrobial activity

(2012) Ewa Kochan et al.   IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-PLANT

The rhizosphere microbiome and plant health

(2012) Roeland L. Berendsen et al.   TRENDS IN PLANT SCIENCE

American Ginseng: Research Developments, Opportunities, and Challenges

(2012) Zamir K. Punja   Journal of Ginseng Research

Impact of root exudates and plant defense signaling on bacterial communities in the rhizosphere. A review

(2011) Rogier F. Doornbos et al.   Agronomy for Sustainable Development

UCHIME improves sensitivity and speed of chimera detection

(2011) Robert C. Edgar et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Salicylic Acid and its Function in Plant ImmunityF

(2011) Chuanfu An et al.   Journal of Integrative Plant Biology

Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria

(2011) R. Mendes et al.   SCIENCE

Metagenomic biomarker discovery and explanation

(2011) Nicola Segata et al.   GENOME BIOLOGY

American ginseng: Potential structure–function relationship in cancer chemoprevention

(2010) Lian-Wen Qi et al.   BIOCHEMICAL PHARMACOLOGY

The UNITE database for molecular identification of fungi - recent updates and future perspectives

(2010) Kessy Abarenkov et al.   NEW PHYTOLOGIST

Dynamic response of ginsenosides in American ginseng to root fungal pathogens

(2010) Xiao Lin Jiao et al.   PLANT AND SOIL

Fungistasis and general soil biostasis – A new synthesis

(2010) Paolina Garbeva et al.   SOIL BIOLOGY & BIOCHEMISTRY

Expression of a β-1,3-glucanase from a biocontrol fungus in transgenic pearl millet

(2010) M.M. O'Kennedy et al.   SOUTH AFRICAN JOURNAL OF BOTANY

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

Growth, population dynamics, and diversity of Fusarium equiseti in ginseng fields

(2008) Z. K. Punja et al.   EUROPEAN JOURNAL OF PLANT PATHOLOGY

Identification of autotoxic compounds from fibrous roots of Panax quinquefolium L.

(2008) Chun Nian He et al.   PLANT AND SOIL

The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms

(2008) Jos M. Raaijmakers et al.   PLANT AND SOIL