Whole-genome sequencing of multiple isolates of Puccinia triticina reveals asexual lineages evolving by recurrent mutations

Virulence of Puccinia triticina, the wheat leaf rust fungus, in the United States in 2017.

(2019) James Kolmer   PLANT DISEASE

The global burden of pathogens and pests on major food crops

(2019) Serge Savary et al.   Nature Ecology & Evolution

Multilocus genotypes of the wheat leaf rust fungus Puccinia triticina in worldwide regions indicate past and current long distance migration.

(2019) James Kolmer et al.   PHYTOPATHOLOGY

Emergence of the Ug99 lineage of the wheat stem rust pathogen through somatic hybridisation

(2019) Feng Li et al.   Nature Communications

Endemic and panglobal genetic groups, and divergence of host-associated forms in worldwide collections of the wheat leaf rust fungus Puccinia triticina as determined by genotyping by sequencing

(2019) J. A. Kolmer et al.   HEREDITY

Physiologic Specialization of Puccinia triticina on Wheat in the United States in 2016

(2018) J. A. Kolmer et al.   PLANT DISEASE

Genetically Divergent Types of the Wheat Leaf Fungus Puccinia triticina in Ethiopia, a Center of Tetraploid Wheat Diversity

(2016) J. A. Kolmer et al.   PHYTOPATHOLOGY

Comparative Analysis Highlights Variable Genome Content of Wheat Rusts and Divergence of the Mating Loci

(2016) Christina A. Cuomo et al.   G3-Genes Genomes Genetics

Population divergence in the wheat leaf rust fungus Puccinia triticina is correlated with wheat evolution

(2013) M Liu et al.   HEREDITY

Physiologic Specialization of Puccinia triticina on Wheat in the United States in 2011

(2013) J. A. Kolmer et al.   PLANT DISEASE

Physiologic Specialization of Puccinia triticina on Wheat in the United States in 2010

(2012) J. A. Kolmer et al.   PLANT DISEASE

Genetic differentiation of the wheat leaf rust fungusPuccinia triticinain Europe

(2012) J. A. Kolmer et al.   PLANT PATHOLOGY

Somatic Hybridization in the Uredinales

(2011) Robert F. Park et al.   Annual Review of Phytopathology

SignalP 4.0: discriminating signal peptides from transmembrane regions

(2011) Thomas Nordahl Petersen et al.   NATURE METHODS

Genetic Differentiation of Puccinia triticina Populations in the Middle East and Genetic Similarity with Populations in Central Asia

(2011) J. A. Kolmer et al.   PHYTOPATHOLOGY

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Differentiation of Molecular Genotypes and Virulence Phenotypes ofPuccinia triticinafrom Common Wheat in North America

(2009) M. E. Ordoñez et al.   PHYTOPATHOLOGY

Physiologic Specialization of Puccinia triticina on Wheat in the United States in 2007

(2009) J. A. Kolmer et al.   PLANT DISEASE

Wheat leaf rust caused byPuccinia triticina

(2008) MELVIN D. BOLTON et al.   MOLECULAR PLANT PATHOLOGY