An interaction quantitative trait loci tool implicates epistatic functional variants in an apoptosis pathway in smallpox vaccine eQTL data

Lessons learned in the analysis of high-dimensional data in vaccinomics

(2015) Ann L. Oberg et al.   VACCINE

Inhibition of IRS-1 by hepatitis C virus infection leads to insulin resistance in a PTEN-dependent manner

(2015) Ting-ting Gao et al.   Virology Journal

Differential co-expression network centrality and machine learning feature selection for identifying susceptibility hubs in networks with scale-free structure

(2015) Caleb A Lareau et al.   BioData Mining

dcVar: a method for identifying common variants that modulate differential correlation structures in gene expression data

(2015) Caleb A. Lareau et al.   Frontiers in Genetics

ImmPort: disseminating data to the public for the future of immunology

(2014) Sanchita Bhattacharya et al.   IMMUNOLOGIC RESEARCH

EINVis: A Visualization Tool for Analyzing and Exploring Genetic Interactions in Large-Scale Association Studies

(2013) Yubao Wu et al.   GENETIC EPIDEMIOLOGY

Encore: Genetic Association Interaction Network Centrality Pipeline and Application to SLE Exome Data

(2013) Nicholas A. Davis et al.   GENETIC EPIDEMIOLOGY

Apoptosis and other immune biomarkers predict influenza vaccine responsiveness

(2013) D. Furman et al.   Molecular Systems Biology

ReliefSeq: A Gene-Wise Adaptive-K Nearest-Neighbor Feature Selection Tool for Finding Gene-Gene Interactions and Main Effects in mRNA-Seq Gene Expression Data

(2013) Brett A. McKinney et al.   PLoS One

Vaccinomics, adversomics, and the immune response network theory: Individualized vaccinology in the 21st century

(2013) Gregory A. Poland et al.   SEMINARS IN IMMUNOLOGY

Gene-Based Testing of Interactions in Association Studies of Quantitative Traits

(2013) Li Ma et al.   PLoS Genetics

Genome-wide genetic associations with IFNγ response to smallpox vaccine

(2012) Richard B. Kennedy et al.   HUMAN GENETICS

High-Dimensional Gene Expression Profiling Studies in High and Low Responders to Primary Smallpox Vaccination

(2012) Iana H. Haralambieva et al.   JOURNAL OF INFECTIOUS DISEASES

IMP: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks

(2012) Aaron K. Wong et al.   NUCLEIC ACIDS RESEARCH

The mystery of missing heritability: Genetic interactions create phantom heritability

(2012) O. Zuk et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Advances in Quantitative Trait Analysis in Yeast

(2012) Gianni Liti et al.   PLoS Genetics

A systematic eQTL study of cis–trans epistasis in 210 HapMap individuals

(2011) Jessica Becker et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

Optimizing high dimensional gene expression studies for immune response following smallpox vaccination using Taqman® Low density immune arrays

(2011) Ann L. Oberg et al.   JOURNAL OF IMMUNOLOGICAL METHODS

Common SNPs/Haplotypes in IL18R1 and IL18 Genes Are Associated With Variations in Humoral Immunity to Smallpox Vaccination in Caucasians and African Americans

(2011) Iana H. Haralambieva et al.   JOURNAL OF INFECTIOUS DISEASES

TRAPPC4-ERK2 Interaction Activates ERK1/2, Modulates Its Nuclear Localization and Regulates Proliferation and Apoptosis of Colorectal Cancer Cells

(2011) Shu-Liang Zhao et al.   PLoS One

Comparison of Strategies to Detect Epistasis from eQTL Data

(2011) Karen Kapur et al.   PLoS One

Correlations Between Vaccinia-Specific Immune Responses Within a Cohort of Armed Forces Members

(2011) Benjamin J. Umlauf et al.   VIRAL IMMUNOLOGY

Trans-eQTLs Reveal That Independent Genetic Variants Associated with a Complex Phenotype Converge on Intermediate Genes, with a Major Role for the HLA

(2011) Rudolf S. N. Fehrmann et al.   PLoS Genetics

Surfing a genetic association interaction network to identify modulators of antibody response to smallpox vaccine

(2010) N A Davis et al.   GENES AND IMMUNITY

Detecting gene–gene interactions that underlie human diseases

(2009) Heather J Cordell   NATURE REVIEWS GENETICS

Gender effects on humoral immune responses to smallpox vaccine

(2009) Richard B. Kennedy et al.   VACCINE

Dendritic Cells are preferentially targeted among hematolymphocytes by Modified Vaccinia Virus Ankara and play a key role in the induction of virus-specific T cell responses in vivo

(2008) Luzheng Liu et al.   BMC IMMUNOLOGY

Epistasis — the essential role of gene interactions in the structure and evolution of genetic systems

(2008) Patrick C. Phillips   NATURE REVIEWS GENETICS