SlicerMorph: An open and extensible platform to retrieve, visualize and analyse 3D morphology

Comparing semi‐landmarking approaches for analyzing three‐dimensional cranial morphology

(2021) Sara Rolfe et al.   AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY

Less tautology, more biology? A comment on “high-density” morphometrics

(2020) Andrea Cardini   ZOOMORPHOLOGY

Ecomorphological diversification in squamates from conserved pattern of cranial integration

(2019) Akinobu Watanabe et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RRPP : An r package for fitting linear models to high-dimensional data using residual randomization

(2018) Michael L. Collyer et al.   Methods in Ecology and Evolution

A population level atlas of Mus musculus craniofacial skeleton and automated image-based shape analysis

(2017) A. Murat Maga et al.   JOURNAL OF ANATOMY

Evaluating causes of error in landmark-based data collection using scanners

(2017) Brian M. Shearer et al.   PLoS One

The inside story on 20,000 vertebrates

(2017) Ryan Cross   SCIENCE

Semi-supervised determination of pseudocryptic morphotypes using observer-free characterizations of anatomical alignment and shape

(2017) Natasha S. Vitek et al.   Ecology and Evolution

MicroCT-based phenomics in the zebrafish skeleton reveals virtues of deep phenotyping in a distributed organ system

(2017) Matthew Hur et al.   eLife

SlicerAstro: A 3-D interactive visual analytics tool for HI data

(2017) D. Punzo et al.   Astronomy and Computing

Measurement error in geometric morphometrics

(2016) Carmelo Fruciano   DEVELOPMENT GENES AND EVOLUTION

EMMLi: A maximum likelihood approach to the analysis of modularity

(2016) Anjali Goswami et al.   EVOLUTION

Increasing the impact of medical image computing using community-based open-access hackathons: The NA-MIC and 3D Slicer experience

(2016) Tina Kapur et al.   MEDICAL IMAGE ANALYSIS

High-throughput discovery of novel developmental phenotypes

(2016) Mary E. Dickinson et al.   NATURE

Performance of single and multi-atlas based automated landmarking methods compared to expert annotations in volumetric microCT datasets of mouse mandibles

(2015) Ryan Young et al.   Frontiers in Zoology

Analyzing Fluctuating Asymmetry with Geometric Morphometrics: Concepts, Methods, and Applications

(2015) Christian Klingenberg   Symmetry-Basel

Momocs: Outline Analysis UsingR

(2015) Vincent Bonhomme et al.   Journal of Statistical Software

A Novel Procedure for Rapid Imaging of Adult Mouse Brains with MicroCT Using Iodine-Based Contrast

(2015) Ryan Anderson et al.   PLoS One

A New Fully Automated Approach for Aligning and Comparing Shapes

(2014) Doug M. Boyer et al.   Anatomical Record-Advances in Integrative Anatomy and Evolutionary Biology

Surface landmark quantification of embryonic mouse craniofacial morphogenesis

(2014) Christopher J Percival et al.   BMC DEVELOPMENTAL BIOLOGY

Semi-automatic landmark point annotation for geometric morphometrics

(2014) Paul A Bromiley et al.   Frontiers in Zoology

An exploratory study of contrast agents for soft tissue visualization by means of high resolution X-ray computed tomography imaging

(2013) E. PAUWELS et al.   JOURNAL OF MICROSCOPY

Structural Stabilization of Tissue for Embryo Phenotyping Using Micro-CT with Iodine Staining

(2013) Michael D. Wong et al.   PLoS One

geomorph: anrpackage for the collection and analysis of geometric morphometric shape data

(2013) Dean C. Adams et al.   Methods in Ecology and Evolution

A novel 3D mouse embryo atlas based on micro-CT

(2012) M. D. Wong et al.   DEVELOPMENT

3D Slicer as an image computing platform for the Quantitative Imaging Network

(2012) Andriy Fedorov et al.   MAGNETIC RESONANCE IMAGING

The FaceBase Consortium: A comprehensive program to facilitate craniofacial research

(2011) Harry Hochheiser et al.   DEVELOPMENTAL BIOLOGY

A reproducible evaluation of ANTs similarity metric performance in brain image registration

(2010) Brian B. Avants et al.   NEUROIMAGE

MicroCT for developmental biology: A versatile tool for high-contrast 3D imaging at histological resolutions

(2009) Brian D. Metscher   DEVELOPMENTAL DYNAMICS

Advances in Geometric Morphometrics

(2009) Philipp Mitteroecker et al.   Evolutionary Biology