Soil texture and structure heterogeneity predominantly governs bulk density gradients around roots

An improved method for the segmentation of roots from X-ray computed tomography 3D images: Rootine v.2

(2021) Maxime Phalempin et al.   Plant Methods

Reorganisation of rhizosphere soil pore structure by wild plant species in compacted soils

(2020) Jasmine E Burr-Hersey et al.   JOURNAL OF EXPERIMENTAL BOTANY

Experimental platforms for the investigation of spatiotemporal patterns in the rhizosphere-laboratory and field scale

(2020) Doris Vetterlein et al.   JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE

The role of plant species and soil condition in the structural development of the rhizosphere

(2019) Jon R. Helliwell et al.   PLANT CELL AND ENVIRONMENT

Roots compact the surrounding soil depending on the structures they encounter

(2019) Maik Lucas et al.   Scientific Reports

Imaging microstructure of the barley rhizosphere: particle packing and root hair influences

(2018) Nicolai Koebernick et al.   NEW PHYTOLOGIST

Root hairs enable high transpiration rates in drying soils

(2017) Andrea Carminati et al.   NEW PHYTOLOGIST

High-resolution synchrotron imaging shows that root hairs influence rhizosphere soil structure formation

(2017) Nicolai Koebernick et al.   NEW PHYTOLOGIST

Radial porosity peak at the centerline of packed beds with small tube to particle diameter ratios

(2017) Zehua Guo et al.   POWDER TECHNOLOGY

X-ray tomography investigations of mono-sized sphere packing structures in cylindrical containers

(2017) Joerg Reimann et al.   POWDER TECHNOLOGY

Root hairs aid soil penetration by anchoring the root surface to pore walls

(2016) A. Glyn Bengough et al.   JOURNAL OF EXPERIMENTAL BOTANY

Evaluation of soil aggregate microstructure and stability under wetting and drying cycles in two Ultisols using synchrotron-based X-ray micro-computed tomography

(2015) Renming Ma et al.   SOIL & TILLAGE RESEARCH

Analysing the impact of compaction of soil aggregates using X-ray microtomography and water flow simulations

(2015) M. Menon et al.   SOIL & TILLAGE RESEARCH

Image processing of multiphase images obtained via X-ray microtomography: A review

(2014) Steffen Schlüter et al.   WATER RESOURCES RESEARCH

ITK: enabling reproducible research and open science

(2014) Matthew McCormick et al.   Frontiers in Neuroinformatics

TANGO: a generic tool for high-throughput 3D image analysis for studying nuclear organization

(2013) Jean Ollion et al.   BIOINFORMATICS

Root hairs improve root penetration, root–soil contact, and phosphorus acquisition in soils of different strength

(2013) Rebecca E. Haling et al.   JOURNAL OF EXPERIMENTAL BOTANY

Quantifying coupled deformation and water flow in the rhizosphere using X-ray microtomography and numerical simulations

(2013) Jazmín E. Aravena et al.   PLANT AND SOIL

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Efficient and robust nonlocal means denoising of MR data based on salient features matching

(2011) Antonio Tristán-Vega et al.   COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

BoneJ: Free and extensible bone image analysis in ImageJ

(2010) Michael Doube et al.   BONE

Effects of Root-Induced Compaction on Rhizosphere Hydraulic Properties - X-ray Microtomography Imaging and Numerical Simulations

(2010) Jazmín E. Aravena et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Quantifying rhizosphere particle movement around mutant maize roots using time-lapse imaging and particle image velocimetry

(2010) A. V. Vollsnes et al.   EUROPEAN JOURNAL OF SOIL SCIENCE

Radial porosity in packed beds of spheres

(2010) Gary E. Mueller   POWDER TECHNOLOGY

Rhizosphere: biophysics, biogeochemistry and ecological relevance

(2009) Philippe Hinsinger et al.   PLANT AND SOIL

When Roots Lose Contact

(2009) Andrea Carminati et al.   VADOSE ZONE JOURNAL

Study of the Wall Effect on Particle Packing Structure Using X-ray Micro Computed Tomography

(2008) M. Suzuki et al.   ADVANCED POWDER TECHNOLOGY

The maize (Zea mays L.) roothairless3 gene encodes a putative GPI-anchored, monocot-specific, COBRA-like protein that significantly affects grain yield

(2008) Frank Hochholdinger et al.   PLANT JOURNAL