Genome-wide SNP analysis to assess the genetic population structure and diversity of Acrocomia species
出版年份 2021 全文链接
标题
Genome-wide SNP analysis to assess the genetic population structure and diversity of Acrocomia species
作者
关键词
Brazil, Genomics, Phylogeography, Single nucleotide polymorphisms, Population genetics, Taxonomy, Conservation genetics, Genetics
出版物
PLoS One
Volume 16, Issue 7, Pages e0241025
出版商
Public Library of Science (PLoS)
发表日期
2021-07-21
DOI
10.1371/journal.pone.0241025
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Genetic structure of two Acrocomia ecotypes (Arecaceae) across Brazilian savannas and seasonally dry forests
- (2020) Natácia Evangelista de Lima et al. Tree Genetics & Genomes
- More grist for the mill? Species delimitation in the genomic era and its implications for conservation
- (2019) David W. G. Stanton et al. CONSERVATION GENETICS
- Understanding genetic diversity, spatial genetic structure, and mating system through microsatellite markers for the conservation and sustainable use of Acrocomia aculeata (Jacq.) Lodd. Ex Mart.
- (2018) Natália Helena Pesso Coelho et al. CONSERVATION GENETICS
- Using molecular markers to investigate genetic diversity, mating system and gene flow of Neotropical trees
- (2018) C. C. Vinson et al. Brazilian Journal of Botany
- Constraints on the FST–Heterozygosity Outlier Approach
- (2017) Sarah P Flanagan et al. JOURNAL OF HEREDITY
- SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population
- (2016) Gilles Boutet et al. BMC GENOMICS
- Mating System and Genetic Composition of the Macaw Palm (Acrocomia aculeata): Implications for Breeding and Genetic Conservation Programs
- (2016) Éder C. M. Lanes et al. JOURNAL OF HEREDITY
- pcadapt: anRpackage to perform genome scans for selection based on principal component analysis
- (2016) Keurcien Luu et al. Molecular Ecology Resources
- Leaf anatomy of Acrocomia (Arecaceae): an additional contribution to the taxonomic resolution of a genus with great economic potential
- (2016) Suelen A. Vianna et al. PLANT SYSTEMATICS AND EVOLUTION
- Contrasting Influences of Geographic Range and Distribution of Populations on Patterns of Genetic Diversity in Two Sympatric Pilbara Acacias
- (2016) E. Levy et al. PLoS One
- Clumpak : a program for identifying clustering modes and packaging population structure inferences across K
- (2015) Naama M. Kopelman et al. Molecular Ecology Resources
- The prospects of using Acrocomia aculeata ( macaúba ) a non-edible biodiesel feedstock in Brazil
- (2015) Aldara da Silva César et al. RENEWABLE & SUSTAINABLE ENERGY REVIEWS
- LEA: AnRpackage for landscape and ecological association studies
- (2015) Eric Frichot et al. Methods in Ecology and Evolution
- Novel R tools for analysis of genome-wide population genetic data with emphasis on clonality
- (2015) Zhian N. Kamvar et al. Frontiers in Genetics
- A strong ‘filter’ effect of the East China Sea land bridge for East Asia’s temperate plant species: inferences from molecular phylogeography and ecological niche modelling of Platycrater arguta (Hydrangeaceae)
- (2014) Xin-Shuai Qi et al. BMC EVOLUTIONARY BIOLOGY
- Phylogeny and historical biogeography of the cocosoid palms (Arecaceae, Arecoideae, Cocoseae) inferred from sequences of six WRKY gene family loci
- (2014) Alan W. Meerow et al. CLADISTICS
- Molecular Characterization and Population Structure of the Macaw Palm, Acrocomia aculeata (Arecaceae), Ex Situ Germplasm Collection Using Microsatellites Markers
- (2014) E. C. M. Lanes et al. JOURNAL OF HEREDITY
- Phylogeny and biogeography of the Viola iwagawae-tashiroi species complex (Violaceae, section Plagiostigma) endemic to the Ryukyu Archipelago, Japan
- (2014) Koh Nakamura et al. PLANT SYSTEMATICS AND EVOLUTION
- Genetic diversity in three endangered pitcher plant species (Sarracenia ; Sarraceniaceae) is lower than widespread congeners
- (2013) M. Steven Furches et al. AMERICAN JOURNAL OF BOTANY
- Interpretation of patterns of genetic variation in endemic plant species of oceanic islands
- (2013) Tod F. Stuessy et al. BOTANICAL JOURNAL OF THE LINNEAN SOCIETY
- Structural cladistic study of Cocoseae, subtribe Attaleinae (Arecaceae): Evaluating taxonomic limits in Attaleinae and the neotropical genus Syagrus
- (2013) Larry R. Noblick et al. BRITTONIA
- Testing for Associations between Loci and Environmental Gradients Using Latent Factor Mixed Models
- (2013) Eric Frichot et al. MOLECULAR BIOLOGY AND EVOLUTION
- NeEstimatorv2: re-implementation of software for the estimation of contemporary effective population size (Ne) from genetic data
- (2013) C. Do et al. Molecular Ecology Resources
- diveRsity: AnRpackage for the estimation and exploration of population genetics parameters and their associated errors
- (2013) Kevin Keenan et al. Methods in Ecology and Evolution
- Cenozoic colonization and diversification patterns of tropical American palms: evidence fromAstrocaryum(Arecaceae)
- (2012) Julissa Roncal et al. BOTANICAL JOURNAL OF THE LINNEAN SOCIETY
- The genetic structure and mating system of Acrocomia aculeata (Arecaceae)
- (2012) Aluana Gonçalves Abreu et al. GENETICS AND MOLECULAR BIOLOGY
- Genetic diversity in populations of Acrocomia aculeata (Arecaceae) in the northern region of Minas Gerais, Brazil
- (2012) D.A. Oliveira et al. GENETICS AND MOLECULAR RESEARCH
- Climate oscillation during the Quaternary associated with landscape heterogeneity promoted allopatric lineage divergence of a temperate treeKalopanax septemlobus(Araliaceae) in East Asia
- (2012) SHOTA SAKAGUCHI et al. MOLECULAR ECOLOGY
- Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach
- (2012) Jesse A. Poland et al. PLoS One
- Phylogeography of Quercus variabilis Based on Chloroplast DNA Sequence in East Asia: Multiple Glacial Refugia and Mainland-Migrated Island Populations
- (2012) Dongmei Chen et al. PLoS One
- Variation Revealed by SNP Genotyping and Morphology Provides Insight into the Origin of the Tomato
- (2012) Jose Blanca et al. PLoS One
- First karyotype, DNA C-value and AT/GC base composition of macaw palm (Acrocomia aculeata, Arecaceae) - a promising plant for biodiesel production
- (2011) Isabella Santiago Abreu et al. AUSTRALIAN JOURNAL OF BOTANY
- PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs
- (2011) H. E. L. Lischer et al. BIOINFORMATICS
- adegenet 1.3-1: new tools for the analysis of genome-wide SNP data
- (2011) Thibaut Jombart et al. BIOINFORMATICS
- RADSeq: next-generation population genetics
- (2011) J. W. Davey et al. Briefings in Functional Genomics
- Applications and Implications of Neutral versus Non-neutral Markers in Molecular Ecology
- (2011) Heather Kirk et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- Characterization of the Pulp and Kernel Oils from Syagrus oleracea, Syagrus romanzoffiana, and Acrocomia aculeata
- (2011) Michelle Cardoso Coimbra et al. JOURNAL OF FOOD SCIENCE
- Application of SNPs for population genetics of nonmodel organisms: new opportunities and challenges
- (2011) S. J. HELYAR et al. Molecular Ecology Resources
- STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method
- (2011) Dent A. Earl et al. Conservation Genetics Resources
- Stacks : Building and Genotyping Loci De Novo From Short-Read Sequences
- (2011) Julian M. Catchen et al. G3-Genes Genomes Genetics
- Genomics and the future of conservation genetics
- (2010) Fred W. Allendorf et al. NATURE REVIEWS GENETICS
- Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags
- (2010) Paul A. Hohenlohe et al. PLoS Genetics
- Qualidade nutricional da polpa de bocaiúva Acrocomia aculeata (Jacq.) Lodd.
- (2009) Maria Isabel Lima Ramos et al. Food Science and Technology
- Linkage disequilibrium and population structure in wild and domesticated populations ofPhaseolus vulgarisL.
- (2009) Monica Rossi et al. Evolutionary Applications
- Genetics, Evolution, and Conservation of Island Plants
- (2009) Steven J. Franks JOURNAL OF PLANT BIOLOGY
- Assessing statistical power of SNPs for population structure and conservation studies
- (2009) PHILLIP A. MORIN et al. Molecular Ecology Resources
- Genetics in geographically structured populations: defining, estimating and interpreting FST
- (2009) Kent E. Holsinger et al. NATURE REVIEWS GENETICS
- Molecular phylogeography of East Asian Kirengeshoma (Hydrangeaceae) in relation to Quaternary climate change and landbridge configurations
- (2009) Ying-Xiong Qiu et al. NEW PHYTOLOGIST
- Gene flow and species delimitation
- (2009) Rémy J. Petit et al. TRENDS IN ECOLOGY & EVOLUTION
- The reality and importance of founder speciation in evolution
- (2008) Alan R. Templeton BIOESSAYS
- ldne: a program for estimating effective population size from data on linkage disequilibrium
- (2008) ROBIN S. WAPLES et al. Molecular Ecology Resources
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started