Land use change in the Amazon rain forest favours generalist fungi

Land-use system shapes soil bacterial communities in Southeastern Amazon region

(2015) Lucas William Mendes et al.   APPLIED SOIL ECOLOGY

Microbial ecosystems are dominated by specialist taxa

(2015) Mahendra Mariadassou et al.   ECOLOGY LETTERS

Fungal Traits That Drive Ecosystem Dynamics on Land

(2015) Kathleen K. Treseder et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Coexistence of Specialist and Generalist Species Is Shaped by Dispersal and Environmental Factors

(2014) Lucie Büchi et al.   AMERICAN NATURALIST

Plant traits and taxonomy drive host associations in tropical phyllosphere fungal communities

(2014) Steven W. Kembel et al.   Botany

Altered beta diversity in post-agricultural woodlands: two hypotheses and the role of scale

(2014) Emily Grman et al.   ECOGRAPHY

Predicting the responsiveness of soil biodiversity to deforestation: a cross-biome study

(2014) Thomas W. Crowther et al.   GLOBAL CHANGE BIOLOGY

Links between plant and fungal communities across a deforestation chronosequence in the Amazon rainforest

(2014) Rebecca C Mueller et al.   ISME Journal

Responses of Soil Fungi to Logging and Oil Palm Agriculture in Southeast Asian Tropical Forests

(2014) K. L. McGuire et al.   MICROBIAL ECOLOGY

Land use change alters functional gene diversity, composition and abundance in Amazon forest soil microbial communities

(2014) Fabiana S. Paula et al.   MOLECULAR ECOLOGY

How Does Conversion of Natural Tropical Rainforest Ecosystems Affect Soil Bacterial and Fungal Communities in the Nile River Watershed of Uganda?

(2014) Peter O. Alele et al.   PLoS One

Endemism and functional convergence across the North American soil mycobiome

(2014) J. M. Talbot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Strong coupling of plant and fungal community structure across western Amazonian rainforests

(2013) Kabir G Peay et al.   ISME Journal

Specialist species of wood-inhabiting fungi struggle while generalists thrive in fragmented boreal forests

(2013) Jenni Nordén et al.   JOURNAL OF ECOLOGY

Nutrient enrichment increased species richness of leaf litter fungal assemblages in a tropical forest

(2013) Jennifer Kerekes et al.   MOLECULAR ECOLOGY

Towards a unified paradigm for sequence-based identification of fungi

(2013) Urmas Kõljalg et al.   MOLECULAR ECOLOGY

Impact of Amazon land use on the community of soil fungi

(2013) Giselle G. M. Fracetto et al.   SCIENTIA AGRICOLA

Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi

(2012) C. L. Schoch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities

(2012) J. L. M. Rodrigues et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Fundamentals of Microbial Community Resistance and Resilience

(2012) Ashley Shade et al.   Frontiers in Microbiology

Fungal Community Composition in Neotropical Rain Forests: the Influence of Tree Diversity and Precipitation

(2011) Krista L. McGuire et al.   MICROBIAL ECOLOGY

Primary forests are irreplaceable for sustaining tropical biodiversity

(2011) Luke Gibson et al.   NATURE

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

A multi-region assessment of tropical forest biodiversity in a human-modified world

(2010) Toby A. Gardner et al.   BIOLOGICAL CONSERVATION

Evidence of dispersal limitation in soil microorganisms: Isolation reduces species richness on mycorrhizal tree islands

(2010) Kabir G. Peay et al.   ECOLOGY

Functional diversity in resource use by fungi

(2010) Krista L. McGuire et al.   ECOLOGY

Worldwide decline of specialist species: toward a global functional homogenization?

(2010) Joanne Clavel et al.   FRONTIERS IN ECOLOGY AND THE ENVIRONMENT

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Beyond the Fragmentation Threshold Hypothesis: Regime Shifts in Biodiversity Across Fragmented Landscapes

(2010) Renata Pardini et al.   PLoS One

Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale

(2009) C. L. Lauber et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Contrasting Soil pH Effects on Fungal and Bacterial Growth Suggest Functional Redundancy in Carbon Mineralization

(2009) J. Rousk et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Resilience of tropical rain forests: tree community reassembly in secondary forests

(2009) Natalia Norden et al.   ECOLOGY LETTERS

Prospects for tropical forest biodiversity in a human-modified world

(2009) Toby A. Gardner et al.   ECOLOGY LETTERS

Biodiversity Loss in Latin American Coffee Landscapes: Review of the Evidence on Ants, Birds, and Trees

(2008) STACY M. PHILPOTT et al.   CONSERVATION BIOLOGY

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

(2008) Marcel G. A. van der Heijden et al.   ECOLOGY LETTERS

Loss of functional diversity under land use intensification across multiple taxa

(2008) Dan F. B. Flynn et al.   ECOLOGY LETTERS

Fungal Taxa Target Different Carbon Sources in Forest Soil

(2008) China A. Hanson et al.   ECOSYSTEMS

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Land use influences soil fungal community composition across central Victoria, south-eastern Australia

(2008) Sabine Kasel et al.   SOIL BIOLOGY & BIOCHEMISTRY

The influence of soil properties on the structure of bacterial and fungal communities across land-use types

(2008) Christian L. Lauber et al.   SOIL BIOLOGY & BIOCHEMISTRY