Endogenous Retroviruses Drive Lineage-Specific Regulatory Evolution across Primate and Rodent Placentae
出版年份 2021 全文链接
标题
Endogenous Retroviruses Drive Lineage-Specific Regulatory Evolution across Primate and Rodent Placentae
作者
关键词
-
出版物
MOLECULAR BIOLOGY AND EVOLUTION
Volume -, Issue -, Pages -
出版商
Oxford University Press (OUP)
发表日期
2021-07-27
DOI
10.1093/molbev/msab223
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Placensin is a glucogenic hormone secreted by human placenta
- (2020) Yiping Yu et al. EMBO REPORTS
- Vertebrate Lineages Exhibit Diverse Patterns of Transposable Element Regulation and Expression across Tissues
- (2020) Giulia I M Pasquesi et al. Genome Biology and Evolution
- Origin and function of the yolk sac in primate embryogenesis
- (2020) Connor Ross et al. Nature Communications
- Endogenous retroviruses drive species-specific germline transcriptomes in mammals
- (2020) Akihiko Sakashita et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- The ENCODE Blacklist: Identification of Problematic Regions of the Genome
- (2019) Haley M. Amemiya et al. Scientific Reports
- Derivation of Human Trophoblast Stem Cells
- (2018) Hiroaki Okae et al. Cell Stem Cell
- Anthropoid primate–specific retroviral element THE1B controls expression of CRH in placenta and alters gestation length
- (2018) Caitlin E. Dunn-Fletcher et al. PLOS BIOLOGY
- Systematic perturbation of retroviral LTRs reveals widespread long-range effects on human gene regulation
- (2018) Daniel R Fuentes et al. eLife
- Pregnancy is a model for tumors, not transplantation
- (2016) Kenneth D. Beaman et al. AMERICAN JOURNAL OF REPRODUCTIVE IMMUNOLOGY
- Expression and function of endogenous retroviruses in the placenta
- (2016) Joachim Denner APMIS
- Ever-Changing Landscapes: Transcriptional Enhancers in Development and Evolution
- (2016) Hannah K. Long et al. CELL
- SRF Co-factors Control the Balance between Cell Proliferation and Contractility
- (2016) Francesco Gualdrini et al. MOLECULAR CELL
- Regulatory activities of transposable elements: from conflicts to benefits
- (2016) Edward B. Chuong et al. NATURE REVIEWS GENETICS
- Epigenetic balance of gene expression by Polycomb and COMPASS families
- (2016) Andrea Piunti et al. SCIENCE
- Regulatory evolution of innate immunity through co-option of endogenous retroviruses
- (2016) E. B. Chuong et al. SCIENCE
- Placenta: The Forgotten Organ
- (2015) Emin Maltepe et al. Annual Review of Cell and Developmental Biology
- Detecting Endogenous Retrovirus-Driven Tissue-Specific Gene Transcription
- (2015) Mihaela Pavlicev et al. Genome Biology and Evolution
- Only humans have human placentas: molecular differences between mice and humans
- (2015) André Schmidt et al. JOURNAL OF REPRODUCTIVE IMMUNOLOGY
- The Dfam database of repetitive DNA families
- (2015) Robert Hubley et al. NUCLEIC ACIDS RESEARCH
- The Roles of Syncytin-Like Proteins in Ruminant Placentation
- (2015) Yuki Nakaya et al. Viruses-Basel
- SRF is required for neutrophil migration in response to inflammation
- (2014) A. Taylor et al. BLOOD
- Dual views of SRF: a genomic exposure
- (2014) K. A. Clark et al. GENES & DEVELOPMENT
- deepTools: a flexible platform for exploring deep-sequencing data
- (2014) Fidel Ramírez et al. NUCLEIC ACIDS RESEARCH
- A Comparison of the Histological Structure of the Placenta in Experimental Animals
- (2014) Satoshi Furukawa et al. Journal of Toxicologic Pathology
- SRF selectively controls tip cell invasive behavior in angiogenesis
- (2013) C. A. Franco et al. DEVELOPMENT
- Endogenous retroviruses function as species-specific enhancer elements in the placenta
- (2013) Edward B Chuong et al. NATURE GENETICS
- High-throughput chromatin immunoprecipitation for genome-wide mapping of in vivo protein-DNA interactions and epigenomic states
- (2013) Ronnie Blecher-Gonen et al. Nature Protocols
- The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote
- (2013) Yang Liao et al. NUCLEIC ACIDS RESEARCH
- STAR: ultrafast universal RNA-seq aligner
- (2012) Alexander Dobin et al. BIOINFORMATICS
- Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
- (2012) H. Thorvaldsdottir et al. BRIEFINGS IN BIOINFORMATICS
- Comparative Epigenomic Annotation of Regulatory DNA
- (2012) Shu Xiao et al. CELL
- Embryonic stem cell potency fluctuates with endogenous retrovirus activity
- (2012) Todd S. Macfarlan et al. NATURE
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- MEME-ChIP: motif analysis of large DNA datasets
- (2011) Philip Machanick et al. BIOINFORMATICS
- RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
- (2011) Bo Li et al. BMC BIOINFORMATICS
- A disintegrin and metalloprotease protein-12 as a novel marker for the diagnosis of ectopic pregnancy
- (2011) Mary E. Rausch et al. FERTILITY AND STERILITY
- Convergent Evolution of Endometrial Prolactin Expression in Primates, Mice, and Elephants Through the Independent Recruitment of Transposable Elements
- (2011) Deena Emera et al. MOLECULAR BIOLOGY AND EVOLUTION
- The evolution of gene expression levels in mammalian organs
- (2011) David Brawand et al. NATURE
- Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals
- (2011) Vincent J Lynch et al. NATURE GENETICS
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- GREAT improves functional interpretation of cis-regulatory regions
- (2010) Cory Y McLean et al. NATURE BIOTECHNOLOGY
- Transposable elements have rewired the core regulatory network of human embryonic stem cells
- (2010) Galih Kunarso et al. NATURE GENETICS
- MER41 Repeat Sequences Contain Inducible STAT1 Binding Sites
- (2010) Christoph D. Schmid et al. PLoS One
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
- (2009) M. D. Robinson et al. BIOINFORMATICS
- Endogenous retroviral LTRs as promoters for human genes: A critical assessment
- (2009) Carla J. Cohen et al. GENE
- Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
- (2009) Da Wei Huang et al. Nature Protocols
- The Evolution, Regulation, and Function of Placenta-Specific Genes
- (2008) Saara M. Rawn et al. Annual Review of Cell and Developmental Biology
- Serum Response Factor Is Required for Sprouting Angiogenesis and Vascular Integrity
- (2008) Claudio Areias Franco et al. DEVELOPMENTAL CELL
- Transposable elements and the evolution of regulatory networks
- (2008) Cédric Feschotte NATURE REVIEWS GENETICS
- Model-based Analysis of ChIP-Seq (MACS)
- (2008) Yong Zhang et al. GENOME BIOLOGY
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreAdd your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload Now