Sea shell diversity and rapidly evolving secretomes: insights into the evolution of biomineralization

Molluscan shell colour

(2016) Suzanne T. Williams   BIOLOGICAL REVIEWS

Characterisation of the mantle transcriptome and biomineralisation genes in the blunt-gaper clam, Mya truncata

(2016) Victoria A. Sleight et al.   Marine Genomics

Spikey Bivalves: Intra-Periostracal Crystal Growth in Anomalodesmatans

(2016) Antonio G. Checa et al.   BIOLOGICAL BULLETIN

Transcriptome and biomineralization responses of the pearl oyster Pinctada fucata to elevated CO2 and temperature

(2016) Shiguo Li et al.   Scientific Reports

Another biomineralising protostome with anmsp130gene and conservation ofmsp130gene structure across Bilateria

(2015) Réka Szabó et al.   EVOLUTION & DEVELOPMENT

The Magellania venosa Biomineralizing Proteome: A Window into Brachiopod Shell Evolution

(2015) Daniel J. Jackson et al.   Genome Biology and Evolution

In-depth proteomic analysis of nacre, prism, and myostracum of Mytilus shell

(2015) Zhi Liao et al.   Journal of Proteomics

Shell proteome of rhynchonelliform brachiopods

(2015) Françoise Immel et al.   JOURNAL OF STRUCTURAL BIOLOGY

Transcriptomic response to shell damage in the Antarctic clam, Laternula elliptica: Time scales and spatial localisation

(2015) Victoria A. Sleight et al.   Marine Genomics

Calcium carbonate nucleation driven by ion binding in a biomimetic matrix revealed by in situ electron microscopy

(2015) Paul J. M. Smeets et al.   NATURE MATERIALS

Testing the transferability of a coarse-grained model to intrinsically disordered proteins

(2015) Gil O. Rutter et al.   PHYSICAL CHEMISTRY CHEMICAL PHYSICS

Examination of the skeletal proteome of the brittle star Ophiocoma wendtii reveals overall conservation of proteins but variation in spicule matrix proteins

(2015) Ryan W Seaver et al.   Proteome Science

The Lingula genome provides insights into brachiopod evolution and the origin of phosphate biomineralization

(2015) Yi-Jyun Luo et al.   Nature Communications

In-depth proteomic analysis of shell matrix proteins of Pinctada fucata

(2015) Chuang Liu et al.   Scientific Reports

Transcriptome Sequencing and Characterization of Japanese Scallop Patinopecten yessoensis from Different Shell Color Lines

(2015) Jun Ding et al.   PLoS One

Evolution of the tyrosinase gene family in bivalve molluscs: Independent expansion of the mantle gene repertoire

(2014) Felipe Aguilera et al.   Acta Biomaterialia

Characterization of the pigmented shell-forming proteome of the common grove snail Cepaea nemoralis

(2014) Karlheinz Mann et al.   BMC GENOMICS

Horizontal transfer of themsp130gene supported the evolution of metazoan biomineralization

(2014) Charles A. Ettensohn   EVOLUTION & DEVELOPMENT

Control of shell pigmentation by secretory tubules in the abalone mantle

(2014) Alyssa Budd et al.   Frontiers in Zoology

The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralization

(2014) Nathalie Le Roy et al.   Frontiers in Zoology

Deep sequencing of the mantle transcriptome of the great scallop Pecten maximus

(2014) Sébastien Artigaud et al.   Marine Genomics

The Lottia gigantea shell matrix proteome: re-analysis including MaxQuant iBAQ quantitation and phosphoproteome analysis

(2014) Karlheinz Mann et al.   Proteome Science

Recent Advances and Unanswered Questions in Deep Molluscan Phylogenetics*

(2013) Kevin M. Kocot   AMERICAN MALACOLOGICAL BULLETIN

An ancient process in a modern mollusc: early development of the shell in Lymnaea stagnalis

(2013) Jennifer Hohagen et al.   BMC DEVELOPMENTAL BIOLOGY

Mollusk shell structures and their formation mechanism

(2013) Michio Suzuki et al.   CANADIAN JOURNAL OF ZOOLOGY

Characterisation and expression of the biomineralising gene Lustrin A during shell formation of the European abalone Haliotis tuberculata

(2013) B. Gaume et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

Identification of a tyrosinase gene potentially involved in early larval shell biogenesis of the Pacific oyster Crassostrea gigas

(2013) Pin Huan et al.   DEVELOPMENT GENES AND EVOLUTION

Rapid evolution of pearl oyster shell matrix proteins with repetitive, low-complexity domains

(2013) C. McDougall et al.   Journal of the Royal Society Interface

Characterization of the Zhikong Scallop (Chlamys farreri) Mantle Transcriptome and Identification of Biomineralization-Related Genes

(2013) Mingjun Shi et al.   MARINE BIOTECHNOLOGY

Biomineral Proteins from Mytilus edulis Mantle Tissue Transcriptome

(2013) Andy Freer et al.   MARINE BIOTECHNOLOGY

The Skeletal Proteome of the Coral Acropora millepora: The Evolution of Calcification by Co-Option and Domain Shuffling

(2013) Paula Ramos-Silva et al.   MOLECULAR BIOLOGY AND EVOLUTION

Comparative Analysis of the Transcriptome in Tissues Secreting Purple and White Nacre in the Pearl Mussel Hyriopsis cumingii

(2013) Zhiyi Bai et al.   PLoS One

Left-right asymmetric expression of dpp in the mantle of gastropods correlates with asymmetric shell coiling

(2013) Keisuke Shimizu et al.   EvoDevo

Identification and characterization of a matrix protein (PPP-10) in the periostracum of the pearl oyster, Pinctada fucata

(2013) Seiji Nakayama et al.   FEBS Open Bio

Aragonite-associated biomineralization proteins are disordered and contain interactive motifs

(2012) John Spencer Evans   BIOINFORMATICS

Structural disorder in proteins brings order to crystal growth in biomineralization

(2012) Lajos Kalmar et al.   BONE

Molluscs

(2012) Gerhard Haszprunar et al.   CURRENT BIOLOGY

Developmental role of dpp in the gastropod shell plate and co-option of the dpp signaling pathway in the evolution of the operculum

(2012) Naoki Hashimoto et al.   DEVELOPMENTAL BIOLOGY

The shell-forming proteome ofLottia giganteareveals both deep conservations and lineage-specific novelties

(2012) Benjamin Marie et al.   FEBS Journal

Identification of Two Carbonic Anhydrases in the Mantle of the European Abalone Haliotis tuberculata (Gastropoda, Haliotidae): Phylogenetic Implications

(2012) NATHALIE LE ROY et al.   JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION

A Comparative Study of the Shell Matrix Protein Aspein in Pterioid Bivalves

(2012) Yukinobu Isowa et al.   JOURNAL OF MOLECULAR EVOLUTION

Characterization of the Pearl Oyster (Pinctada martensii) Mantle Transcriptome Unravels Biomineralization Genes

(2012) Yaohua Shi et al.   MARINE BIOTECHNOLOGY

The Molecular Evolution of the Pif Family Proteins in Various Species of Mollusks

(2012) Michio Suzuki et al.   MARINE BIOTECHNOLOGY

Analysis of a deep transcriptome from the mantle tissue of Patella vulgata Linnaeus (Mollusca: Gastropoda: Patellidae) reveals candidate biomineralising genes

(2012) Gijsbert D. A. Werner et al.   MARINE BIOTECHNOLOGY

Transcriptome-wide polymorphisms of red abalone (Haliotis rufescens) reveal patterns of gene flow and local adaptation

(2012) Pierre De Wit et al.   MOLECULAR ECOLOGY

The oyster genome reveals stress adaptation and complexity of shell formation

(2012) Guofan Zhang et al.   NATURE

Different secretory repertoires control the biomineralization processes of prism and nacre deposition of the pearl oyster shell

(2012) B. Marie et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In-depth proteomic analysis of a mollusc shell: acid-soluble and acid-insoluble matrix of the limpet Lottia gigantea

(2012) Karlheinz Mann et al.   Proteome Science

Crystallization Pathways in Biomineralization

(2011) Steve Weiner et al.   Annual Review of Materials Research

Sequence of the Pearl Oyster Carbonic Anhydrase-Related Protein and Its Evolutionary Implications

(2011) Hiroshi Miyamoto   BIOCHEMICAL GENETICS

Spatial analysis of biomineralization associated gene expression from the mantle organ of the pearl oyster Pinctada maxima

(2011) Luke D Gardner et al.   BMC GENOMICS

Ultrastructure of the Mantle of the Gastropod Haliotis asinina and Mechanisms of Shell Regionalization

(2011) Carmel McDougall et al.   CELLS TISSUES ORGANS

Coupling Proteomics and Transcriptomics for the Identification of Novel and Variant Forms of Mollusk Shell Proteins: A Study with P. margaritifera

(2011) Sophie Berland et al.   CHEMBIOCHEM

Possible functions of Dpp in gastropod shell formation and shell coiling

(2011) Keisuke Shimizu et al.   DEVELOPMENT GENES AND EVOLUTION

Novel Proteins from the Calcifying Shell Matrix of the Pacific Oyster Crassostrea gigas

(2011) Benjamin Marie et al.   MARINE BIOTECHNOLOGY

Proteomic Identification of Novel Proteins from the Calcifying Shell Matrix of the Manila Clam Venerupis Philippinarum

(2011) Benjamin Marie et al.   MARINE BIOTECHNOLOGY

The Mining of Pearl Formation Genes in Pearl Oyster Pinctada fucata by cDNA Suppression Subtractive Hybridization

(2011) Ning Wang et al.   MARINE BIOTECHNOLOGY

In silico whole-genome EST analysis reveals 2322 novel microsatellites for the silver-lipped pearl oyster, Pinctada maxima

(2011) D.B. Jones et al.   Marine Genomics

Intrinsic disorder of the extracellular matrix

(2011) Franck Peysselon et al.   Molecular BioSystems

Resolving the evolutionary relationships of molluscs with phylogenomic tools

(2011) Stephen A. Smith et al.   NATURE

Phylogenomics reveals deep molluscan relationships

(2011) Kevin M. Kocot et al.   NATURE

Structural Analysis of a Repetitive Protein Sequence Motif in Strepsirrhine Primate Amelogenin

(2011) Rodrigo S. Lacruz et al.   PLoS One

Deep Sequencing of ESTs from Nacreous and Prismatic Layer Producing Tissues and a Screen for Novel Shell Formation-Related Genes in the Pearl Oyster

(2011) Shigeharu Kinoshita et al.   PLoS One

Identification of Genes Directly Involved in Shell Formation and Their Functions in Pearl Oyster, Pinctada fucata

(2011) Dong Fang et al.   PLoS One

A molecular palaeobiological hypothesis for the origin of aplacophoran molluscs and their derivation from chiton-like ancestors

(2011) J. Vinther et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Cambrian Conundrum: Early Divergence and Later Ecological Success in the Early History of Animals

(2011) D. H. Erwin et al.   SCIENCE

Insights into shell deposition in the Antarctic bivalve Laternula elliptica: gene discovery in the mantle transcriptome using 454 pyrosequencing

(2010) Melody S Clark et al.   BMC GENOMICS

Transcriptome and proteome analysis of Pinctada margaritifera calcifying mantle and shell: focus on biomineralization

(2010) Caroline Joubert et al.   BMC GENOMICS

Expression of Hox genes during the larval development of the snail, Gibbula varia (L.)—further evidence of non-colinearity in molluscs

(2010) Leyli Samadi et al.   DEVELOPMENT GENES AND EVOLUTION

Identification of Genes Potentially Involved in Pearl Formation by Expressed Sequence Tag Analysis of Mantle from Freshwater Pearl Mussel(Hyriopsis Cumingii Lea)

(2010) Zhiyi Bai et al.   JOURNAL OF SHELLFISH RESEARCH

Biomineralization markers during early shell formation in the European abalone Haliotis tuberculata, Linnaeus

(2010) Béatrice Gaume et al.   MARINE BIOLOGY

Proteomic analysis of the organic matrix of the abalone Haliotis asinina calcified shell

(2010) Benjamin Marie et al.   Proteome Science

Proteomic analysis of sea urchin (Strongylocentrotus purpuratus) spicule matrix

(2010) Karlheinz Mann et al.   Proteome Science

Molluscan shell evolution with review of shell calcification hypothesis

(2009) Takeshi Furuhashi et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

Expression of genes responsible for biomineralization of Pinctada fucata during development

(2009) Yoko Miyazaki et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

A novel role for dpp in the shaping of bivalve shells revealed in a conserved molluscan developmental program

(2009) Koryu Kin et al.   DEVELOPMENTAL BIOLOGY

Parallel Evolution of Nacre Building Gene Sets in Molluscs

(2009) Daniel J. Jackson et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phosphorylated Proteins and Control over Apatite Nucleation, Crystal Growth, and Inhibition

(2008) Anne George et al.   CHEMICAL REVIEWS

Expression patterns of engrailed and dpp in the gastropod Lymnaea stagnalis

(2008) Minoru Iijima et al.   DEVELOPMENT GENES AND EVOLUTION

Carbonic Anhydrase in the Scleractinian CoralStylophora pistillata

(2008) Aurélie Moya et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Nodal signalling is involved in left–right asymmetry in snails

(2008) Cristina Grande et al.   NATURE

The sea urchin (Strongylocentrotus purpuratus) test and spine proteomes

(2008) Karlheinz Mann et al.   Proteome Science