Developing an Updated Strategy for Estimating the Free-Energy Parameters in RNA Duplexes

Improving RNA nearest neighbor parameters for helices by going beyond the two-state model

(2018) Aleksandar Spasic et al.   NUCLEIC ACIDS RESEARCH

RNA structure through multidimensional chemical mapping

(2016) Siqi Tian et al.   QUARTERLY REVIEWS OF BIOPHYSICS

Effect of Sodium Ions on RNA Duplex Stability

(2013) Zexiang Chen et al.   BIOCHEMISTRY

Testing the Nearest Neighbor Model for Canonical RNA Base Pairs: Revision of GU Parameters

(2012) Jonathan L. Chen et al.   BIOCHEMISTRY

Thermodynamic characterization of naturally occurring RNA tetraloops

(2010) J. P. Sheehy et al.   RNA

Prediction of RNA secondary structure using generalized centroid estimators

(2008) Michiaki Hamada et al.   BIOINFORMATICS

Gibbs’ Paradox and the Definition of Entropy

(2008) Robert Swendsen   Entropy

Structural inference of native and partially folded RNA by high-throughput contact mapping

(2008) R. Das et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA