Modeling nearshore fish habitats using Alaska as a regional case study

Environmental and Structural Drivers of Fish Distributions among Petroleum Platforms across the U.S. Gulf of Mexico

(2020) Derek G. Bolser et al.   Marine and Coastal Fisheries

Good Practices for Species Distribution Modeling of Deep-Sea Corals and Sponges for Resource Management: Data Collection, Analysis, Validation, and Communication

(2020) Arliss J. Winship et al.   Frontiers in Marine Science

Making the most of available monitoring data: A grid-summarization method to allow for the combined use of monitoring data collected at random and fixed sampling stations

(2020) Arnaud Grüss et al.   FISHERIES RESEARCH

Understanding patterns of fish backscatter, size and density around petroleum platforms of the U.S. Gulf of Mexico using hydroacoustic data

(2020) Jack P. Egerton et al.   FISHERIES RESEARCH

Non-stationary Gaussian models with physical barriers

(2019) Haakon Bakka et al.   Spatial Statistics

Evaluation of the impacts of different treatments of spatio-temporal variation in catch-per-unit-effort standardization models

(2019) Arnaud Grüss et al.   FISHERIES RESEARCH

Developing spatio-temporal models using multiple data types for evaluating population trends and habitat usage

(2019) Arnaud Grüss et al.   ICES JOURNAL OF MARINE SCIENCE

Trade‐offs in covariate selection for species distribution models: a methodological comparison

(2019) Stephanie Brodie et al.   ECOGRAPHY

Shining a light on the composition and distribution patterns of mesophotic and subphotic fish communities in Hawai‘i

(2019) M Weijerman et al.   MARINE ECOLOGY PROGRESS SERIES

A geostatistical state-space model of animal densities for stream networks

(2018) Daniel J. Hocking et al.   ECOLOGICAL APPLICATIONS

Monitoring programs of the U.S. Gulf of Mexico: inventory, development and use of a large monitoring database to map fish and invertebrate spatial distributions

(2018) Arnaud Grüss et al.   REVIEWS IN FISH BIOLOGY AND FISHERIES

Assisting Ecosystem-Based Fisheries Management Efforts Using a Comprehensive Survey Database, a Large Environmental Database, and Generalized Additive Models

(2018) Arnaud Grüss et al.   Marine and Coastal Fisheries

Representing species distributions in spatially-explicit ecosystem models from presence-only data

(2018) Arnaud Grüss et al.   FISHERIES RESEARCH

Comparing estimates of abundance trends and distribution shifts using single- and multispecies models of fishes and biogenic habitat

(2017) James T. Thorson et al.   ICES JOURNAL OF MARINE SCIENCE

Using species distribution models to describe essential fish habitat in Alaska

(2017) Edward A. Laman et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Habitat suitability models for groundfish in the Gulf of Alaska

(2017) Jodi L. Pirtle et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Exploring the spatial distribution patterns of South African Cape hakes using generalised additive models

(2016) A Grüss et al.   AFRICAN JOURNAL OF MARINE SCIENCE

Forty years of seagrass population stability and resilience in an urbanizing estuary

(2016) Andrew O. Shelton et al.   JOURNAL OF ECOLOGY

Shallow-water habitat use by Bering Sea flatfishes along the central Alaska Peninsula

(2016) Thomas P. Hurst   JOURNAL OF SEA RESEARCH

Validation and improvement of species distribution models for structure-forming invertebrates in the eastern Bering Sea with an independent survey

(2016) CN Rooper et al.   MARINE ECOLOGY PROGRESS SERIES

Cross-Shelf Habitat Occupancy Probabilities for Juvenile Groupers in the Florida Keys Coral Reef Ecosystem

(2016) W. J. Harford et al.   Marine and Coastal Fisheries

Validation and improvement of species distribution models for structure-forming invertebrates in the eastern Bering Sea with an independent survey

(2016) CN Rooper et al.   MARINE ECOLOGY PROGRESS SERIES

Habitat-based cetacean density models for the U.S. Atlantic and Gulf of Mexico

(2016) Jason J. Roberts et al.   Scientific Reports

Applying Bayesian spatiotemporal models to fisheries bycatch in the Canadian Arctic

(2015) Aurelie Cosandey-Godin et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Think outside the grids: An objective approach to define spatial strata for catch and effort analysis

(2015) Kotaro Ono et al.   FISHERIES RESEARCH

Geostatistical delta-generalized linear mixed models improve precision for estimated abundance indices for West Coast groundfishes

(2015) James T. Thorson et al.   ICES JOURNAL OF MARINE SCIENCE

Spatial semiparametric models improve estimates of species abundance and distribution

(2014) Andrew Olaf Shelton et al.   CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES

Using delta generalized additive models to produce distribution maps for spatially explicit ecosystem models

(2014) Arnaud Grüss et al.   FISHERIES RESEARCH

A practical guide to MaxEnt for modeling species’ distributions: what it does, and why inputs and settings matter

(2013) Cory Merow et al.   ECOGRAPHY

How long should we ignore imperfect detection of species in the marine environment when modelling their distribution?

(2013) Jacquomo Monk   FISH AND FISHERIES

Flexible regression models over river networks

(2013) David O'Donnell et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES C-APPLIED STATISTICS

Spatial Distribution and Conservation of Speckled Hind and Warsaw Grouper in the Atlantic Ocean off the Southeastern U.S.

(2013) Nicholas A. Farmer et al.   PLoS One

Oil Impacts on Coastal Wetlands: Implications for the Mississippi River Delta Ecosystem after the Deepwater Horizon Oil Spill

(2012) Irving A. Mendelssohn et al.   BIOSCIENCE

The global contribution of forage fish to marine fisheries and ecosystems

(2012) Ellen K Pikitch et al.   FISH AND FISHERIES

Nearshore subtidal community structure compared between inner coast and outer coast sites in Southeast Alaska

(2012) Jodi L. Pirtle et al.   POLAR BIOLOGY

Straightforward intermediate rank tensor product smoothing in mixed models

(2012) Simon N. Wood et al.   STATISTICS AND COMPUTING

Predictive models of northern anchovy Engraulis mordax and Pacific sardine Sardinops sagax spawning habitat in the California Current

(2010) ED Weber et al.   MARINE ECOLOGY PROGRESS SERIES

Species Distribution Models: Ecological Explanation and Prediction Across Space and Time

(2009) Jane Elith et al.   Annual Review of Ecology Evolution and Systematics

Temporal and ontogenetic shifts in habitat use of juvenile Pacific cod (Gadus macrocephalus)

(2009) Benjamin J. Laurel et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Eelgrass patch size and proximity to the patch edge affect predation risk of recently settled age 0 cod (Gadus)

(2009) Ann Marie Gorman et al.   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

Identification of deep-water pink shrimp abundance distribution patterns and nursery grounds in the eastern Mediterranean by means of generalized additive modelling

(2008) Chrissi-Yianna Politou et al.   HYDROBIOLOGIA

Soap film smoothing

(2008) Simon N. Wood et al.   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY

Relative influence of habitat fragmentation and inundation on brown shrimp Farfantepenaeus aztecus production in northern Gulf of Mexico salt marshes

(2008) BM Roth et al.   MARINE ECOLOGY PROGRESS SERIES

Distribution and Use of Shallow-Water Habitats by Pacific Sand Lances in Southeastern Alaska

(2008) Scott W. Johnson et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY