Analysis of Selection Methods to Develop Novel Phage Therapy Cocktails Against Antimicrobial Resistant Clinical Isolates of Bacteria

Development of a Bacteriophage Cocktail to Constrain the Emergence of Phage-Resistant Pseudomonas aeruginosa

(2020) Yuhui Yang et al.   Frontiers in Microbiology

Emerging Antimicrobial Resistant High-Risk clones among Klebsiella pneumoniae: ST307 and ST147

(2020) Gisele Peirano et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Therapeutic Characterization and Efficacy of Bacteriophage Cocktails Infecting Escherichia coli, Klebsiella pneumoniae, and Enterobacter Species

(2019) Prasanth Manohar et al.   Frontiers in Microbiology

Riding the wave of genomics to investigate aquatic coliphage diversity and activity

(2019) Slawomir Michniewski et al.   ENVIRONMENTAL MICROBIOLOGY

Two Phages of the Genera Felixounavirus Subjected to 12 Hour Challenge on Salmonella Infantis Showed Distinct Genotypic and Phenotypic Changes

(2019) Rivera et al.   Viruses-Basel

Validating the NCBI AMRFinder Tool and Resistance Gene Database Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of NARMS Isolates

(2019) Michael Feldgarden et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Characterization of Lytic Bacteriophages Infecting Multidrug-Resistant Shiga Toxigenic Atypical Escherichia coli O177 Strains Isolated From Cattle Feces

(2019) Peter Kotsoana Montso et al.   Frontiers in Public Health

Design of a Broad-Range Bacteriophage Cocktail That Reduces Pseudomonas aeruginosa Biofilms and Treats Acute Infections in Two Animal Models

(2018) Francesca Forti et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Discovery, research, and development of new antibiotics: the WHO priority list of antibiotic-resistant bacteria and tuberculosis

(2018) Evelina Tacconelli et al.   LANCET INFECTIOUS DISEASES

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

“French Phage Network”—Third Meeting Report

(2018) Mireille Ansaldi et al.   Viruses-Basel

Phage Therapy: What Have We Learned?

(2018) Andrzej Górski et al.   Viruses-Basel

In Vitro Characteristics of Phages to Guide ‘Real Life’ Phage Therapy Suitability

(2018) Eoghan Casey et al.   Viruses-Basel

In Vitro Design and Evaluation of Phage Cocktails Against Aeromonas salmonicida

(2018) Ling Chen et al.   Frontiers in Microbiology

Past and Present Perspectives on β-Lactamases

(2018) Karen Bush   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Bacteriophage ZCKP1: A Potential Treatment for Klebsiella pneumoniae Isolated From Diabetic Foot Patients

(2018) Omar A. Taha et al.   Frontiers in Microbiology

Complete genome analysis of a Siphoviridae phage TSK1 showing biofilm removal potential against Klebsiella pneumoniae

(2018) Rabia Tabassum et al.   Scientific Reports

Bacteriophage Therapy: Clinical Trials and Regulatory Hurdles

(2018) Lucy L. Furfaro et al.   Frontiers in Cellular and Infection Microbiology

PhageTerm: a tool for fast and accurate determination of phage termini and packaging mechanism using next-generation sequencing data

(2017) Julian R. Garneau et al.   Scientific Reports

Sepsis Caused by Extended-Spectrum Beta-Lactamase (ESBL)-Positive K. pneumoniae and E. coli: Comparison of Severity of Sepsis, Delay of Anti-Infective Therapy and ESBL Genotype

(2016) Christian Sakellariou et al.   PLoS One

The global epidemiology of carbapenemase-producing Enterobacteriaceae

(2016) David van Duin et al.   Virulence

Bacteriophages as Potential Treatment for Urinary Tract Infections

(2016) Wilbert Sybesma et al.   Frontiers in Microbiology

Risk Factors and Outcomes for Carbapenem-ResistantKlebsiella pneumoniaeIsolation, Stratified by Its Multilocus Sequence Typing: ST258 Versus Non-ST258

(2016) Sorabh Dhar et al.   Open Forum Infectious Diseases

Bacteriophage Combinations Significantly Reduce Clostridium difficile GrowthIn Vitroand ProliferationIn Vivo

(2015) Janet Y. Nale et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph

(2015) Dinghua Li et al.   BIOINFORMATICS

On-Demand Isolation of Bacteriophages Against Drug-Resistant Bacteria for Personalized Phage Therapy

(2015) Sari Mattila et al.   Frontiers in Microbiology

Bacteriophage secondary infection

(2015) Stephen T. Abedon   VIROLOGICA SINICA

Isolation of Phages for Phage Therapy: A Comparison of Spot Tests and Efficiency of Plating Analyses for Determination of Host Range and Efficacy

(2015) Mohammadali Khan Mirzaei et al.   PLoS One

Genomic Analysis of the Emergence and Rapid Global Dissemination of the Clonal Group 258 Klebsiella pneumoniae Pandemic

(2015) Jolene R. Bowers et al.   PLoS One

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Synergy as a rationale for phage therapy using phage cocktails

(2014) Matthew Schmerer et al.   PeerJ

QUAST: quality assessment tool for genome assemblies

(2013) Alexey Gurevich et al.   BIOINFORMATICS

Clinical relevance of the ESKAPE pathogens

(2013) Jack N Pendleton et al.   Expert Review of Anti-Infective Therapy

Phage cocktails and the future of phage therapy

(2013) Benjamin K Chan et al.   Future Microbiology

Escherichia coli Sequence Type 131 as a Prominent Cause of Antibiotic Resistance among Urinary Escherichia coli Isolates from Reproductive-Age Women

(2013) T. Kudinha et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Identification of acquired antimicrobial resistance genes

(2012) E. Zankari et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

BIGSdb: Scalable analysis of bacterial genome variation at the population level

(2011) Keith A Jolley et al.   BMC BIOINFORMATICS

Abolition of Biofilm Formation in Urinary Tract Escherichia coli and Klebsiella Isolates by Metal Interference through Competition for Fur

(2010) V. Hancock et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Escherichia coliSequence Type ST131 as the Major Cause of Serious Multidrug‐ResistantE. coliInfections in the United States

(2010) James R. Johnson et al.   CLINICAL INFECTIOUS DISEASES

Phage therapy experience at the Eliava Institute

(2008) M. Kutateladze et al.   MEDECINE ET MALADIES INFECTIEUSES