标题
Targeting of viral RNAs by Upf1-mediated RNA decay pathways
作者
关键词
-
出版物
Current Opinion in Virology
Volume 47, Issue -, Pages 1-8
出版商
Elsevier BV
发表日期
2020-12-18
DOI
10.1016/j.coviro.2020.11.002
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Structure-Mediated RNA Decay by UPF1 and G3BP1
- (2020) Joseph W. Fischer et al. MOLECULAR CELL
- Stop codon context influences genome-wide stimulation of termination codon readthrough by aminoglycosides
- (2020) Jamie R Wangen et al. eLife
- The Multifunctional Long-Distance Movement Protein of Pea Enation Mosaic Virus 2 Protects Viral and Host Transcripts from Nonsense-Mediated Decay
- (2020) Jared P. May et al. mBio
- The RNA-binding protein PTBP1 promotes ATPase-dependent dissociation of the RNA helicase UPF1 to protect transcripts from nonsense-mediated mRNA decay
- (2020) Sarah E. Fritz et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Viral subversion of nonsense-mediated mRNA decay
- (2020) Maximilian Wei-Lin Popp et al. RNA
- The RNA quality control pathway nonsense-mediated mRNA decay targets cellular and viral RNAs to restrict KSHV
- (2020) Yang Zhao et al. Nature Communications
- UPF1-Mediated RNA Decay—Danse Macabre in a Cloud
- (2020) Daria Lavysh et al. Biomolecules
- UPFront and center in RNA decay: UPF1 in nonsense-mediated mRNA decay and beyond
- (2019) Yoon Ki Kim et al. RNA
- Identification of antiviral roles for the exon–junction complex and nonsense-mediated decay in flaviviral infection
- (2019) Minghua Li et al. Nature Microbiology
- Staufen1 Protein Participates Positively in the Viral RNA Replication of Enterovirus 71
- (2019) Young-Mao Chen et al. Viruses-Basel
- HIV-1 requires Staufen1 to dissociate stress granules and to produce infectious viral particles
- (2019) Shringar Rao et al. RNA
- Host mRNA decay proteins influence HIV-1 replication and viral gene expression in primary monocyte-derived macrophages
- (2019) Shringar Rao et al. Retrovirology
- The stress granule protein G3BP1 binds viral dsRNA and RIG-I to enhance IFN-β response
- (2019) Susana Soo-Yeon Kim et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Single-Molecule Imaging Uncovers Rules Governing Nonsense-Mediated mRNA Decay
- (2019) Tim A. Hoek et al. MOLECULAR CELL
- Quality and quantity control of gene expression by nonsense-mediated mRNA decay
- (2019) Tatsuaki Kurosaki et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Nonsense‐mediated mRNA decay: The challenge of telling right from wrong in a complex transcriptome
- (2019) Aparna Kishor et al. Wiley Interdisciplinary Reviews-RNA
- Cauliflower mosaic virus transactivator protein (TAV) can suppress nonsense-mediated decay by targeting VARICOSE, a scaffold protein of the decapping complex
- (2019) Nina Lukhovitskaya et al. Scientific Reports
- The landscape of transcription initiation across latent and lytic KSHV genomes
- (2019) Xiang Ye et al. PLoS Pathogens
- Separate domains of G3BP promote efficient clustering of alphavirus replication complexes and recruitment of the translation initiation machinery
- (2019) Benjamin Götte et al. PLoS Pathogens
- Noroviruses subvert the core stress granule component G3BP1 to promote viral VPg-dependent translation
- (2019) Myra Hosmillo et al. eLife
- G3BP1 inhibits RNA virus replication by positively regulating RIG-I-mediated cellular antiviral response
- (2019) Wenping Yang et al. Cell Death & Disease
- STAU1 binds to IBDV genomic double-stranded RNA and promotes viral replication via attenuation of MDA5-dependent β interferon induction
- (2018) Chengjin Ye et al. FASEB JOURNAL
- HTLV-1 Tax plugs and freezes UPF1 helicase leading to nonsense-mediated mRNA decay inhibition
- (2018) Francesca Fiorini et al. Nature Communications
- Stress Granules and Processing Bodies in Translational Control
- (2018) Pavel Ivanov et al. Cold Spring Harbor Perspectives in Biology
- hnRNP L‐dependent protection of normal mRNAs from NMD subverts quality control in B cell lymphoma
- (2018) Aparna Kishor et al. EMBO JOURNAL
- Interplay between coronavirus, a cytoplasmic RNA virus, and nonsense-mediated mRNA decay pathway
- (2018) Masami Wada et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The Cellular NMD Pathway Restricts Zika Virus Infection and Is Targeted by the Viral Capsid Protein
- (2018) Krystal A. Fontaine et al. mBio
- Staufen1 Interacts with Multiple Components of the Ebola Virus Ribonucleoprotein and Enhances Viral RNA Synthesis
- (2018) Jingru Fang et al. mBio
- RNA virus evasion of nonsense-mediated decay
- (2018) Jared P. May et al. PLoS Pathogens
- A system for coordinated analysis of translational readthrough and nonsense-mediated mRNA decay
- (2017) Stacey L. Baker et al. PLoS One
- The stress granule component G3BP is a novel interaction partner for the nuclear shuttle proteins of the nanovirus pea necrotic yellow dwarf virus and geminivirus abutilon mosaic virus
- (2017) Susanna Krapp et al. VIRUS RESEARCH
- Virus Escape and Manipulation of Cellular Nonsense-Mediated mRNA Decay
- (2017) Giuseppe Balistreri et al. Viruses-Basel
- Non-canonical Translation in Plant RNA Viruses
- (2017) Manuel Miras et al. Frontiers in Plant Science
- Conservation of Nonsense-Mediated mRNA Decay Complex Components Throughout Eukaryotic Evolution
- (2017) Barry Causier et al. Scientific Reports
- A GC-rich sequence feature in the 3′ UTR directs UPF1-dependent mRNA decay in mammalian cells
- (2016) Naoto Imamachi et al. GENOME RESEARCH
- Viral Evasion and Manipulation of Host RNA Quality Control Pathways
- (2016) J. Robert Hogg JOURNAL OF VIROLOGY
- Staufen1 promotes HCV replication by inhibiting protein kinase R and transporting viral RNA to the site of translation and replication in the cells
- (2016) Updesh Dixit et al. NUCLEIC ACIDS RESEARCH
- Transcriptome-wide identification of NMD-targeted human mRNAs reveals extensive redundancy between SMG6- and SMG7-mediated degradation pathways
- (2016) Martino Colombo et al. RNA
- Structural basis of suppression of host translation termination by Moloney Murine Leukemia Virus
- (2016) Xuhua Tang et al. Nature Communications
- Hyperphosphorylation amplifies UPF1 activity to resolve stalls in nonsense-mediated mRNA decay
- (2016) Sébastien Durand et al. Nature Communications
- Exon junction complex proteins bind nascent transcripts independently of pre-mRNA splicing in Drosophila melanogaster
- (2016) Subhendu Roy Choudhury et al. eLife
- Polypyrimidine tract binding protein 1 protects mRNAs from recognition by the nonsense-mediated mRNA decay pathway
- (2016) Zhiyun Ge et al. eLife
- Distinct stages in stress granule assembly and disassembly
- (2016) Joshua R Wheeler et al. eLife
- A Combined Proteomics/Genomics Approach Links Hepatitis C Virus Infection with Nonsense-Mediated mRNA Decay
- (2015) Holly R. Ramage et al. MOLECULAR CELL
- hiCLIP reveals the in vivo atlas of mRNA secondary structures recognized by Staufen 1
- (2015) Yoichiro Sugimoto et al. NATURE
- Identification of elements in human long 3′ UTRs that inhibit nonsense-mediated decay
- (2015) Kalodiah G. Toma et al. RNA
- G3BP1 restricts HIV-1 replication in macrophages and T-cells by sequestering viral RNA
- (2015) Viviana Cobos Jiménez et al. VIROLOGY
- The 5′ and 3′ ends of alphavirus RNAs – Non-coding is not non-functional
- (2015) Jennifer L. Hyde et al. VIRUS RESEARCH
- Human Upf1 is a highly processive RNA helicase and translocase with RNP remodelling activities
- (2015) Francesca Fiorini et al. Nature Communications
- Nonsense-Mediated Decay Serves as a General Viral Restriction Mechanism in Plants
- (2014) Damien Garcia et al. Cell Host & Microbe
- The Host Nonsense-Mediated mRNA Decay Pathway Restricts Mammalian RNA Virus Replication
- (2014) Giuseppe Balistreri et al. Cell Host & Microbe
- Retroviral strategy to stabilize viral RNA
- (2014) Bao Lin Quek et al. CURRENT OPINION IN MICROBIOLOGY
- Identification of SMG6 cleavage sites and a preferred RNA cleavage motif by global analysis of endogenous NMD targets in human cells
- (2014) Skye A. Schmidt et al. NUCLEIC ACIDS RESEARCH
- 3′ Cap-Independent Translation Enhancers of Plant Viruses
- (2013) Anne E. Simon et al. Annual Review of Microbiology
- Non-structural protein 1 of influenza viruses inhibits rapid mRNA degradation mediated by double-stranded RNA-binding protein, staufen1
- (2013) Hana Cho et al. FEBS LETTERS
- Global analyses of UPF1 binding and function reveal expanded scope of nonsense-mediated mRNA decay
- (2013) J. A. Hurt et al. GENOME RESEARCH
- UPF1 Is Crucial for the Infectivity of Human Immunodeficiency Virus Type 1 Progeny Virions
- (2013) A. K. P. Serquina et al. JOURNAL OF VIROLOGY
- Encephalomyocarditis Virus Disrupts Stress Granules, the Critical Platform for Triggering Antiviral Innate Immune Responses
- (2013) C. S. Ng et al. JOURNAL OF VIROLOGY
- Viral interference with host mRNA surveillance, the nonsense-mediated mRNA decay (NMD) pathway, through a new function of HTLV-1 Rex: implications for retroviral replication
- (2013) Kazumi Nakano et al. MICROBES AND INFECTION
- Staufen1 senses overall transcript secondary structure to regulate translation
- (2013) Emiliano P Ricci et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Staufen1 dimerizes through a conserved motif and a degenerate dsRNA-binding domain to promote mRNA decay
- (2013) Michael L Gleghorn et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3′ UTRs
- (2013) David Zünd et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Nonsense-mediated mRNA decay occurs during eIF4F-dependent translation in human cells
- (2013) Sébastien Durand et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- eIF4E-bound mRNPs are substrates for nonsense-mediated mRNA decay in mammalian cells
- (2013) Simone C Rufener et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Genome-wide analysis of Staufen-associated mRNAs identifies secondary structures that confer target specificity
- (2013) John D. Laver et al. NUCLEIC ACIDS RESEARCH
- Nonsense-Mediated Decay of Alternative Precursor mRNA Splicing Variants Is a Major Determinant of the Arabidopsis Steady State Transcriptome
- (2013) G. Drechsel et al. PLANT CELL
- Rules that govern UPF1 binding to mRNA 3′ UTRs
- (2013) Tatsuaki Kurosaki et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Staufen-mediated mRNA decay
- (2013) Eonyoung Park et al. Wiley Interdisciplinary Reviews-RNA
- Both G3BP1 and G3BP2 contribute to stress granule formation
- (2012) Hideaki Matsuki et al. GENES TO CELLS
- Non-canonical translation in RNA viruses
- (2012) A. E. Firth et al. JOURNAL OF GENERAL VIROLOGY
- The Human T-Lymphotropic Virus Type 1 Tax Protein Inhibits Nonsense-Mediated mRNA Decay by Interacting with INT6/EIF3E and UPF1
- (2012) V. Mocquet et al. JOURNAL OF VIROLOGY
- CLIP-seq of eIF4AIII reveals transcriptome-wide mapping of the human exon junction complex
- (2012) Jérôme Saulière et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Impairment of the Staufen1-NS1 interaction reduces influenza viral replication
- (2011) Jun-Han Lee et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- The structure and function of the rous sarcoma virus RNA stability element
- (2011) Johanna B. Withers et al. JOURNAL OF CELLULAR BIOCHEMISTRY
- lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3′ UTRs via Alu elements
- (2011) Chenguang Gong et al. NATURE
- Novel Staufen1 ribonucleoproteins prevent formation of stress granules but favour encapsidation of HIV-1 genomic RNA
- (2010) L. G. Abrahamyan et al. JOURNAL OF CELL SCIENCE
- Human Staufen1 Protein Interacts with Influenza Virus Ribonucleoproteins and Is Required for Efficient Virus Multiplication
- (2010) S. de Lucas et al. JOURNAL OF VIROLOGY
- Host Factors Associated with the Sindbis Virus RNA-Dependent RNA Polymerase: Role for G3BP1 and G3BP2 in Virus Replication
- (2010) I. M. Cristea et al. JOURNAL OF VIROLOGY
- Structural features in the Rous sarcoma virus RNA stability element are necessary for sensing the correct termination codon
- (2010) Johanna B Withers et al. Retrovirology
- Gene expression networks: competing mRNA decay pathways in mammalian cells
- (2009) Lynne E. Maquat et al. BIOCHEMICAL SOCIETY TRANSACTIONS
- Plant upstream ORFs can trigger nonsense-mediated mRNA decay in a size-dependent manner
- (2009) Tünde Nyikó et al. PLANT MOLECULAR BIOLOGY
- Upf1 Phosphorylation Triggers Translational Repression during Nonsense-Mediated mRNA Decay
- (2008) Olaf Isken et al. CELL
- SMD and NMD are competitive pathways that contribute to myogenesis: effects on PAX3 and myogenin mRNAs
- (2008) C. Gong et al. GENES & DEVELOPMENT
- The host protein Staufen1 interacts with the Pr55Gag zinc fingers and regulates HIV-1 assembly via its N-terminus
- (2008) Laurent Chatel-Chaix et al. Retrovirology
- Unexpected roles for UPF1 in HIV-1 RNA metabolism and translation
- (2008) L. Ajamian et al. RNA
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now