Insights about the epidemiology of Salmonella Typhimurium isolates from different sources in Brazil using comparative genomics
出版年份 2021 全文链接
标题
Insights about the epidemiology of Salmonella Typhimurium isolates from different sources in Brazil using comparative genomics
作者
关键词
-
出版物
Gut Pathogens
Volume 13, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2021-04-29
DOI
10.1186/s13099-021-00423-7
参考文献
相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。- Worldwide Epidemiology of Salmonella Serovars in Animal-Based Foods: a Meta-analysis
- (2019) Rafaela G Ferrari et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- OrthoVenn2: a web server for whole-genome comparison and annotation of orthologous clusters across multiple species
- (2019) Ling Xu et al. NUCLEIC ACIDS RESEARCH
- ezTree: an automated pipeline for identifying phylogenetic marker genes and inferring evolutionary relationships among uncultivated prokaryotic draft genomes
- (2018) Yu-Wei Wu BMC GENOMICS
- Exploring the multi-drug resistance in Escherichia coli O157:H7 by gene interaction network: A systems biology approach
- (2018) Sravan Kumar Miryala et al. GENOMICS
- Genomic characterization of endemic Salmonella enterica serovar Typhimurium and Salmonella enterica serovar I 4,[5],12:i:- isolated in Malaysia
- (2018) Soo Tein Ngoi et al. INFECTION GENETICS AND EVOLUTION
- A genomic overview of the population structure of Salmonella
- (2018) Nabil-Fareed Alikhan et al. PLoS Genetics
- Phylogenetic and antimicrobial resistance gene analysis of Salmonella Typhimurium strains isolated in Brazil by whole genome sequencing
- (2018) Fernanda Almeida et al. PLoS One
- Two Methods for Mapping and Visualizing Associated Data on Phylogeny Using Ggtree
- (2018) Guangchuang Yu et al. MOLECULAR BIOLOGY AND EVOLUTION
- Prophages in Salmonella enterica : a driving force in reshaping the genome and physiology of their bacterial host?
- (2018) Astrid Wahl et al. MOLECULAR MICROBIOLOGY
- Multilocus sequence typing of Salmonella Typhimurium reveals the presence of the highly invasive ST313 in Brazil
- (2017) Fernanda Almeida et al. INFECTION GENETICS AND EVOLUTION
- Molecular characterization of Salmonella Typhimurium isolated in Brazil by CRISPR-MVLST
- (2017) Fernanda Almeida et al. JOURNAL OF MICROBIOLOGICAL METHODS
- Virulence-associated genes, antimicrobial resistance and molecular typing ofSalmonellaTyphimurium strains isolated from swine from 2000 to 2012 in Brazil
- (2016) F. Almeida et al. JOURNAL OF APPLIED MICROBIOLOGY
- PHASTER: a better, faster version of the PHAST phage search tool
- (2016) David Arndt et al. NUCLEIC ACIDS RESEARCH
- ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data
- (2016) Guangchuang Yu et al. Methods in Ecology and Evolution
- Genotypic diversity, pathogenic potential and the resistance profile of Salmonella Typhimurium strains isolated from humans and food from 1983 to 2013 in Brazil
- (2015) Fernanda Almeida et al. JOURNAL OF MEDICAL MICROBIOLOGY
- OrthoVenn: a web server for genome wide comparison and annotation of orthologous clusters across multiple species
- (2015) Yi Wang et al. NUCLEIC ACIDS RESEARCH
- Prevalence and Characterization of Monophasic Salmonella Serovar 1,4,[5],12:i:- of Food Origin in China
- (2015) Xiaojuan Yang et al. PLoS One
- World Health Organization Estimates of the Global and Regional Disease Burden of 22 Foodborne Bacterial, Protozoal, and Viral Diseases, 2010: A Data Synthesis
- (2015) Martyn D. Kirk et al. PLOS MEDICINE
- Bacterial multidrug efflux pumps: Mechanisms, physiology and pharmacological exploitations
- (2014) Jingjing Sun et al. BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS
- Understanding the basis of antibiotic resistance: a platform for drug discovery
- (2014) L. J. V. Piddock MICROBIOLOGY-SGM
- Solving the Problem of Comparing Whole Bacterial Genomes across Different Sequencing Platforms
- (2014) Rolf S. Kaas et al. PLoS One
- The Comprehensive Antibiotic Resistance Database
- (2013) Andrew G. McArthur et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- Genotypic diversity and virulence markers ofYersinia enterocoliticabiotype 1A strains isolated from clinical and non-clinical origins
- (2013) Fábio Campioni et al. APMIS
- QUAST: quality assessment tool for genome assemblies
- (2013) Alexey Gurevich et al. BIOINFORMATICS
- Genomic diversity and adaptation of Salmonella enterica serovar Typhimurium from analysis of six genomes of different phage types
- (2013) Stanley Pang et al. BMC GENOMICS
- Genetic Types, Gene Repertoire, and Evolution of Isolates of the Salmonella enterica Serovar 4,5,12:i:− Spanish Clone Assigned to Different Phage Types
- (2013) Patricia García et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Phylogenetics and Differentiation of Salmonella Newport Lineages by Whole Genome Sequencing
- (2013) Guojie Cao et al. PLoS One
- Multilocus Sequence Typing of Total-Genome-Sequenced Bacteria
- (2012) M. V. Larsen et al. JOURNAL OF CLINICAL MICROBIOLOGY
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica
- (2012) Mark Achtman et al. PLoS Pathogens
- TolC dependency of multidrug efflux systems in Salmonella enterica serovar Typhimurium
- (2010) Tsukasa Horiyama et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Gene socialization: gene order, GC content and gene silencing in Salmonella
- (2009) Nikolas Papanikolaou et al. BMC GENOMICS
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now