Identification and verification of genes related to pollen development and male sterility induced by high temperature in the thermo-sensitive genic male sterile wheat line

Comparative transcriptome analysis indicates that a core transcriptional network mediates isonuclear alloplasmic male sterility in wheat (Triticum aestivum L.)

(2020) Zihan Liu et al.   BMC PLANT BIOLOGY

Blocked synthesis of sporopollenin and jasmonic acid leads to pollen wall defects and anther indehiscence in genic male sterile wheat line 4110S at high temperatures

(2019) Xuetong Yang et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

A Sterility Induction Trait in the Genic Male Sterility Wheat Line 4110S Induced by High Temperature and its Cytological Response

(2018) Xuetong Yang et al.   CROP SCIENCE

Candidate Genes for Yellow Leaf Color in Common Wheat (Triticum aestivum L.) and Major Related Metabolic Pathways according to Transcriptome Profiling

(2018) Huiyu Wu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Cytological and transcriptome analyses reveal abrupt gene expression for meiosis and saccharide metabolisms that associated with pollen abortion in autotetraploid rice

(2018) Lin Chen et al.   MOLECULAR GENETICS AND GENOMICS

Transcriptome, cytological and biochemical analysis of cytoplasmic male sterility and maintainer line in CMS-D8 cotton

(2018) Li Yang et al.   PLANT MOLECULAR BIOLOGY

Comprehensive transcriptome-based characterization of differentially expressed genes involved in microsporogenesis of radish CMS line and its maintainer

(2016) Yang Xie et al.   FUNCTIONAL & INTEGRATIVE GENOMICS

Differential proteomics analysis to identify proteins and pathways associated with male sterility of soybean using iTRAQ-based strategy

(2016) Jiajia Li et al.   Journal of Proteomics

Transcriptome de novo assembly and analysis of differentially expressed genes related to cytoplasmic male sterility in cabbage

(2016) Shuai Wang et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

(2015) Mihaela Pertea et al.   NATURE BIOTECHNOLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Barley Stripe Mosaic Virus (BSMV) Induced MicroRNA Silencing in Common Wheat (Triticum aestivum L.)

(2015) Jian Jiao et al.   PLoS One

Comparative Transcriptome Analysis between the Cytoplasmic Male Sterile Line NJCMS1A and Its Maintainer NJCMS1B in Soybean (Glycine max (L.) Merr.)

(2015) Jiajia Li et al.   PLoS One

Male sterility systems in wheat and opportunities for hybrid wheat development

(2014) Sudhir P. Singh et al.   ACTA PHYSIOLOGIAE PLANTARUM

Ectoparasitic growth of Magnaporthe on barley triggers expression of the putative barley wax biosynthesis gene CYP96B22 which is involved in penetration resistance

(2014) Rhoda Delventhal et al.   BMC PLANT BIOLOGY

Virus-induced gene silencing is a versatile tool for unraveling the functional relevance of multiple abiotic-stress-responsive genes in crop plants

(2014) Venkategowda Ramegowda et al.   Frontiers in Plant Science

Proteomic analysis on the leaves of TaBTF3 gene virus-induced silenced wheat plants may reveal its regulatory mechanism

(2013) Guozhang Kang et al.   Journal of Proteomics

TaEIL1, a wheat homologue ofAtEIN3, acts as a negative regulator in the wheat-stripe rust fungus interaction

(2013) Xiaoyuan Duan et al.   MOLECULAR PLANT PATHOLOGY

Host-induced gene silencing of wheat leaf rust fungus Puccinia triticina pathogenicity genes mediated by the Barley stripe mosaic virus

(2013) Vinay Panwar et al.   PLANT MOLECULAR BIOLOGY

Low Temperature-Responsive Changes in the Anther Transcriptome's Repeat Sequences Are Indicative of Stress Sensitivity and Pollen Sterility in Rice Strains,

(2013) S. Ishiguro et al.   PLANT PHYSIOLOGY

Yield Trends Are Insufficient to Double Global Crop Production by 2050

(2013) Deepak K. Ray et al.   PLoS One

The LuWD40-1 Gene Encoding WD Repeat Protein Regulates Growth and Pollen Viability in Flax (Linum Usitatissimum L.)

(2013) Santosh Kumar et al.   PLoS One

Cytological and Comparative Proteomic Analyses on Male Sterility in Brassica napus L. Induced by the Chemical Hybridization Agent Monosulphuron Ester Sodium

(2013) Yufeng Cheng et al.   PLoS One

SERE: Single-parameter quality control and sample comparison for RNA-Seq

(2012) Stefan K Schulze et al.   BMC GENOMICS

Landscape of transcription in human cells

(2012) Sarah Djebali et al.   NATURE

Barley Stripe Mosaic Virus-Mediated Tools for Investigating Gene Function in Cereal Plants and Their Pathogens: Virus-Induced Gene Silencing, Host-Mediated Gene Silencing, and Virus-Mediated Overexpression of Heterologous Protein

(2012) W.-S. Lee et al.   PLANT PHYSIOLOGY

Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers

(2011) Wenliang Wei et al.   BMC GENOMICS

Actin bundler PLIM2s are involved in the regulation of pollen development and tube growth in Arabidopsis

(2011) Jianrong Ye et al.   JOURNAL OF PLANT PHYSIOLOGY

Molecular cloning and functional characterization of a putative sulfite oxidase (SO) ortholog from Nicotiana benthamiana

(2011) Zongliang Xia et al.   MOLECULAR BIOLOGY REPORTS

The receptor-like kinase SlSERK1 is required for Mi-1-mediated resistance to potato aphids in tomato

(2011) Sophie Mantelin et al.   PLANT JOURNAL

Virus-Induced Gene Silencing Offers a Functional Genomics Platform for Studying Plant Cell Wall Formation

(2010) Xiaohong Zhu et al.   Molecular Plant

Factors influencing Barley Stripe Mosaic Virus-mediated gene silencing in wheat

(2010) Cahid Cakir et al.   PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY

Virus-Induced Gene Silencing of Plastidial Soluble Inorganic Pyrophosphatase Impairs Essential Leaf Anabolic Pathways and Reduces Drought Stress Tolerance in Nicotiana benthamiana

(2010) Gavin M. George et al.   PLANT PHYSIOLOGY

Characterization of Transcriptional Complexity during Berry Development in Vitis vinifera Using RNA-Seq

(2010) S. Zenoni et al.   PLANT PHYSIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Hordeivirus Replication, Movement, and Pathogenesis

(2009) Andrew O. Jackson et al.   Annual Review of Phytopathology

DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

(2009) Likun Wang et al.   BIOINFORMATICS

WGCNA: an R package for weighted correlation network analysis

(2008) Peter Langfelder et al.   BMC BIOINFORMATICS

Evaluating the ability of the barley stripe mosaic virus-induced gene silencing system to simultaneously silence two wheat genes

(2008) Cahid Cakir et al.   CEREAL RESEARCH COMMUNICATIONS