Tracking the changes of wetland soil bacterial community and metabolic potentials under drought and flooding conditions in experimental microcosms

Drought and plant litter chemistry alter microbial gene expression and metabolite production

(2020) Ashish A. Malik et al.   ISME Journal

Soil and plant characteristics during two hydrologically contrasting years at the lakeshore wetland of Poyang Lake, China

(2020) Ruichang Shen et al.   JOURNAL OF SOILS AND SEDIMENTS

Hydrological variations shape diversity and functional responses of streambed microbes

(2020) G. Gionchetta et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Global CO2 emissions from dry inland waters share common drivers across ecosystems

(2020) P. S. Keller et al.   Nature Communications

Drought effects on soil carbon and nitrogen dynamics in global natural ecosystems

(2020) Lei Deng et al.   EARTH-SCIENCE REVIEWS

Soil bacterial community structure and extracellular enzyme activities under different land use types in a long-term reclaimed wetland

(2019) Lingling Huang et al.   JOURNAL OF SOILS AND SEDIMENTS

The Relative Abundance of Benthic Bacterial Phyla Along a Water-Depth Gradient in a Plateau Lake: Physical, Chemical, and Biotic Drivers

(2019) Kaiyuan Wu et al.   Frontiers in Microbiology

Comparative effects of prolonged freshwater and saline flooding on nitrogen cycling in an agricultural soil

(2018) Antonio Rafael Sánchez-Rodríguez et al.   APPLIED SOIL ECOLOGY

Optimum water depth ranges of dominant submersed macrophytes in a natural freshwater lake

(2018) Bibi Ye et al.   PLoS One

Impacts of water residence time on nitrogen budget of lakes and reservoirs

(2018) Yindong Tong et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Responses of the soil microbial community to nitrogen fertilizer regimes and historical exposure to extreme weather events: Flooding or prolonged-drought

(2018) Linh T.T. Nguyen et al.   SOIL BIOLOGY & BIOCHEMISTRY

Bacterial and Fungal Community Composition and Functional Activity Associated with Lake Wetland Water Level Gradients

(2018) Yantian Ma et al.   Scientific Reports

Flooding and prolonged drought have differential legacy impacts on soil nitrogen cycling, microbial communities and plant productivity

(2018) Linh T. T. Nguyen et al.   PLANT AND SOIL

Shifts in rhizosphere fungal community during secondary succession following abandonment from agriculture

(2017) S Emilia Hannula et al.   ISME Journal

The microbial community characteristics of ancient painted sculptures in Maijishan Grottoes, China

(2017) Yulong Duan et al.   PLoS One

Partial drying accelerates bacterial growth recovery to rewetting

(2017) Annelein Meisner et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil carbon and nitrogen dynamics throughout the summer drought in a California annual grassland

(2017) Sean M. Schaeffer et al.   SOIL BIOLOGY & BIOCHEMISTRY

Response of Methanogenic Microbial Communities to Desiccation Stress in Flooded and Rain-Fed Paddy Soil from Thailand

(2017) Andreas Reim et al.   Frontiers in Microbiology

Increasing flooding frequency alters soil microbial communities and functions under laboratory conditions

(2017) Richard J. Randle-Boggis et al.   MicrobiologyOpen

Vertical variation of bacterial community in Nam Co, a large stratified lake in central Tibetan Plateau

(2016) Keshao Liu et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Responses of nitrifying and denitrifying bacteria to flooding-drying cycles in flooded rice soil

(2016) Huicui Yang et al.   APPLIED SOIL ECOLOGY

Climate and hydrological models to assess the impact of climate change on hydrological regime: a review

(2016) Retinder Kour et al.   Arabian Journal of Geosciences

Polysaccharide Degradation by the Intestinal Microbiota and Its Influence on Human Health and Disease

(2016) Darrell W. Cockburn et al.   JOURNAL OF MOLECULAR BIOLOGY

Dry Season Constrains Bacterial Phylogenetic Diversity in a Semi-Arid Rhizosphere System

(2016) Rodrigo Gouvêa Taketani et al.   MICROBIAL ECOLOGY

Importance and controls of anaerobic ammonium oxidation influenced by riverbed geology

(2016) K. Lansdown et al.   Nature Geoscience

Mechanisms of waterlogging tolerance in wheat - a review of root and shoot physiology

(2016) Max Herzog et al.   PLANT CELL AND ENVIRONMENT

Soil moisture as a factor affecting the microbiological and biochemical activity of soil  

(2016) A. Borowik et al.   PLANT SOIL AND ENVIRONMENT

Microbial diversity drives multifunctionality in terrestrial ecosystems

(2016) Manuel Delgado-Baquerizo et al.   Nature Communications

Belowground Response to Drought in a Tropical Forest Soil. II. Change in Microbial Function Impacts Carbon Composition

(2016) Nicholas J. Bouskill et al.   Frontiers in Microbiology

Soil microbial community structure and function relationships: A heat stress experiment

(2015) Wassila Riah-Anglet et al.   APPLIED SOIL ECOLOGY

Projections of future floods and hydrological droughts in Europe under a +2°C global warming

(2015) Philippe Roudier et al.   CLIMATIC CHANGE

Sediment and nutrient trapping as a result of a temporary Mississippi River floodplain restoration: The Morganza Spillway during the 2011 Mississippi River Flood

(2015) Daniel E. Kroes et al.   ECOLOGICAL ENGINEERING

Resilience vs. historical contingency in microbial responses to environmental change

(2015) Christine V. Hawkes et al.   ECOLOGY LETTERS

Illumina MiSeq sequencing investigation on the contrasting soil bacterial community structures in different iron mining areas

(2015) Chen Hong et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Phagotrophic protists are a key component of microbial communities processing leaf litter under contrasting oxic conditions

(2015) Ute Risse-Buhl et al.   FRESHWATER BIOLOGY

Influence of powdered activated carbon addition on water quality, sludge properties, and microbial characteristics in the biological treatment of commingled industrial wastewater

(2015) Qing-Yuan Hu et al.   JOURNAL OF HAZARDOUS MATERIALS

Mapping dynamic cover types in a large seasonally flooded wetland using extended principal component analysis and object-based classification

(2015) Iryna Dronova et al.   REMOTE SENSING OF ENVIRONMENT

High resolution depth distribution of Bacteria, Archaea, methanotrophs, and methanogens in the bulk and rhizosphere soils of a flooded rice paddy

(2015) Hyo Jung Lee et al.   Frontiers in Microbiology

Predominant bacterial and fungal assemblages in agricultural soils during a record drought/heat wave and linkages to enzyme activities of biogeochemical cycling

(2014) V. Acosta-Martínez et al.   APPLIED SOIL ECOLOGY

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The impacts of climate change on river flood risk at the global scale

(2014) Nigel W. Arnell et al.   CLIMATIC CHANGE

Biodiversity acts as insurance of productivity of bacterial communities under abiotic perturbations

(2014) Ashutosh Awasthi et al.   ISME Journal

Organic priority substances and microbial processes in river sediments subject to contrasting hydrological conditions

(2014) Annamaria Zoppini et al.   SCIENCE OF THE TOTAL ENVIRONMENT

A theoretical analysis of microbial eco-physiological and diffusion limitations to carbon cycling in drying soils

(2014) S. Manzoni et al.   SOIL BIOLOGY & BIOCHEMISTRY

Soil Characteristics in Relation to Vegetation Communities in the Wetlands of Poyang Lake, China

(2014) Wang Xiaolong et al.   WETLANDS

Arthrobacter siccitolerans sp. nov., a highly desiccation-tolerant, xeroprotectant-producing strain isolated from dry soil

(2013) L. SantaCruz-Calvo et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Responses of soil bacterial and fungal communities to extreme desiccation and rewetting

(2013) Romain L Barnard et al.   ISME Journal

Links between metabolic plasticity and functional redundancy in freshwater bacterioplankton communities

(2013) Jérôme Comte et al.   Frontiers in Microbiology

Genetic Linkage of Soil Carbon Pools and Microbial Functions in Subtropical Freshwater Wetlands in Response to Experimental Warming

(2012) Hang Wang et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Microbial community phylogenetic and trait diversity declines with depth in a marine oxygen minimum zone

(2012) Jessica A. Bryant et al.   ECOLOGY

Mapping the niche space of soil microorganisms using taxonomy and traits

(2012) Jay T. Lennon et al.   ECOLOGY

Meiobenthic community patterns of oligotrophic and deep Lake Constance in relation to water depth and nutrients

(2012) W. Traunspurger et al.   Fundamental and Applied Limnology

Investigation of lake drying attributed to climate change

(2012) M. Abbaspour et al.   International Journal of Environmental Science and Technology

Effects of rice straw and nitrogen fertilization on greenhouse gas emissions and carbon storage in tropical flooded soil planted with rice

(2012) P. Bhattacharyya et al.   SOIL & TILLAGE RESEARCH

Severe drought conditions modify the microbial community structure, size and activity in amended and unamended soils

(2012) S. Hueso et al.   SOIL BIOLOGY & BIOCHEMISTRY

Natural Niche for Organohalide-Respiring Chloroflexi

(2011) Mark J. Krzmarzick et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Microbial seed banks: the ecological and evolutionary implications of dormancy

(2011) Jay T. Lennon et al.   NATURE REVIEWS MICROBIOLOGY

From Structure to Function: the Ecology of Host-Associated Microbial Communities

(2010) C. J. Robinson et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Soil biophysical controls over rice straw decomposition and sequestration in soil: The effects of drying intensity and frequency of drying and wetting cycles

(2010) Shui-Hong Yao et al.   SOIL BIOLOGY & BIOCHEMISTRY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Linking Microbial Community Structure and Function to Seasonal Differences in Soil Moisture and Temperature in a Chihuahuan Desert Grassland

(2009) Colin W. Bell et al.   MICROBIAL ECOLOGY

Microbial community structure and its functional implications

(2009) Jed A. Fuhrman   NATURE

Changes in soil chemical properties with flooding: A field laboratory approach

(2008) Irene M. Unger et al.   AGRICULTURE ECOSYSTEMS & ENVIRONMENT

Resistance, resilience, and redundancy in microbial communities

(2008) S. D. Allison et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial dynamics and litter decomposition under a changed climate in a Dutch heathland

(2007) M.J.M. van Meeteren et al.   APPLIED SOIL ECOLOGY