TMTpro-18plex: The Expanded and Complete Set of TMTpro Reagents for Sample Multiplexing

Full-featured, real-time database searching platform enables fast and accurate multiplexed quantitative proteomics.

(2020) Devin K. Schweppe et al.   JOURNAL OF PROTEOME RESEARCH

Rapid and site-specific deep phosphoproteome profiling by data-independent acquisition without the need for spectral libraries

(2020) Dorte B. Bekker-Jensen et al.   Nature Communications

Benchmarking the Orbitrap Tribrid Eclipse for Next Generation Multiplexed Proteomics

(2020) Qing Yu et al.   ANALYTICAL CHEMISTRY

Extending the Separation Space with Trapped Ion Mobility Spectrometry Improves the Accuracy of Isobaric Tag-Based Quantitation in Proteomic LC/MS/MS

(2020) Kosuke Ogata et al.   ANALYTICAL CHEMISTRY

TMTpro reagents: a set of isobaric labeling mass tags enables simultaneous proteome-wide measurements across 16 samples

(2020) Jiaming Li et al.   NATURE METHODS

Improved Monoisotopic Mass Estimation for Deeper Proteome Coverage

(2020) Ramin Rad et al.   JOURNAL OF PROTEOME RESEARCH

Active instrument engagement combined with a real-time database search for improved performance of sample multiplexing workflows

(2019) Brian K Erickson et al.   JOURNAL OF PROTEOME RESEARCH

Characterization and Optimization of Multiplexed Quantitative Analyses Using High-Field Asymmetric-Waveform Ion Mobility Mass Spectrometry

(2019) Devin K. Schweppe et al.   ANALYTICAL CHEMISTRY

Molecular profiling establishes genetic features predictive of the efficacy of the p110β inhibitor KIN-193

(2019) Isha Sethi et al.   CANCER RESEARCH

TMTpro: Design, Synthesis, and Initial Evaluation of a Proline-Based Isobaric 16-Plex Tandem Mass Tag Reagent Set

(2019) Andrew Thompson et al.   ANALYTICAL CHEMISTRY

The Mechanisms Underlying PTEN Loss in Human Tumors Suggest Potential Therapeutic Opportunities

(2019) Hyeyoun Chang et al.   Biomolecules

Optimized Workflow for Multiplexed Phosphorylation Analysis of TMT-Labeled Peptides Using High-Field Asymmetric Waveform Ion Mobility Spectrometry

(2019) Devin K. Schweppe et al.   JOURNAL OF PROTEOME RESEARCH

Streamlined Tandem Mass Tag (SL-TMT) Protocol: An Efficient Strategy for Quantitative (Phospho)proteome Profiling Using Tandem Mass Tag-Synchronous Precursor Selection-MS3

(2018) José Navarrete-Perea et al.   JOURNAL OF PROTEOME RESEARCH

High-throughput and high-sensitivity phosphoproteomics with the EasyPhos platform

(2018) Sean J. Humphrey et al.   Nature Protocols

TKO6: A Peptide Standard To Assess Interference for Unit-Resolved Isobaric Labeling Platforms

(2018) Joao A. Paulo et al.   JOURNAL OF PROTEOME RESEARCH

Online Parallel Accumulation–Serial Fragmentation (PASEF) with a Novel Trapped Ion Mobility Mass Spectrometer

(2018) Florian Meier et al.   MOLECULAR & CELLULAR PROTEOMICS

Improved 6-Plex Tandem Mass Tags Quantification Throughput Using a Linear Ion Trap–High-Energy Collision Induced Dissociation MS3 Scan

(2016) Jane M. Liu et al.   ANALYTICAL CHEMISTRY

Quantitative mass spectrometry-based multiplexing compares the abundance of 5000 S. cerevisiae proteins across 10 carbon sources

(2016) Joao A. Paulo et al.   Journal of Proteomics

A Scalable Approach for Protein False Discovery Rate Estimation in Large Proteomic Data Sets

(2015) Mikhail M. Savitski et al.   MOLECULAR & CELLULAR PROTEOMICS

MultiNotch MS3 Enables Accurate, Sensitive, and Multiplexed Detection of Differential Expression across Cancer Cell Line Proteomes

(2014) Graeme C. McAlister et al.   ANALYTICAL CHEMISTRY

Isobaric Labeling-Based Relative Quantification in Shotgun Proteomics

(2014) Navin Rauniyar et al.   JOURNAL OF PROTEOME RESEARCH

Convergent loss of PTEN leads to clinical resistance to a PI(3)Kα inhibitor

(2014) Dejan Juric et al.   NATURE

Ultradeep Human Phosphoproteome Reveals a Distinct Regulatory Nature of Tyr and Ser/Thr-Based Signaling

(2014) Kirti Sharma et al.   Cell Reports

Genetic Screens in Human Cells Using the CRISPR-Cas9 System

(2013) Tim Wang et al.   SCIENCE

Toward a Comprehensive Characterization of a Human Cancer Cell Phosphoproteome

(2012) Houjiang Zhou et al.   JOURNAL OF PROTEOME RESEARCH

A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression

(2010) Edward L. Huttlin et al.   CELL

The Increase in Cardiac Pyruvate Dehydrogenase Kinase-4 after Short-Term Dexamethasone Is Controlled by an Akt-p38-Forkhead Box Other Factor-1 Signaling Axis

(2010) Prasanth Puthanveetil et al.   ENDOCRINOLOGY

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols