Article
Fisheries
Jiafeng Fang, Chengxun Xu, Qi Li
Summary: The Pacific oyster, Crassostrea gigas, is an important aquaculture species worldwide. Inbreeding is common due to limited population size, high selection pressure, and genetic drift. This study determined the potential effects of inbreeding on the genetic improvement for fast growth of oysters. The results suggest that inbreeding reduces the potential for genetic improvement of rapid growth in oysters.
AQUACULTURE INTERNATIONAL
(2023)
Article
Fisheries
Yong Chi, Gaowei Jiang, Yuanxin Liang, Chengxun Xu, Qi Li
Summary: Selective breeding has shown promising results in improving summer survival in Pacific oysters. The study found that summer survival has a moderate heritability and a positive correlation with growth traits. The realized genetic gain of summer survival increased over generations, indicating the effectiveness of the breeding program.
Article
Fisheries
Jiafeng Fang, Chengxun Xu, Qi Li
Summary: This study investigated the effect of inbreeding on gene expression in the Pacific oyster. It was found that there were differentially expressed genes associated with inbreeding depression. This research contributes to a better understanding and management of inbreeding depression in bivalves, and may potentially benefit oyster breeding in aquaculture.
Article
Biochemistry & Molecular Biology
Antoine Fraimout, Pasi Rastas, Lei Lv, Juha Merila
Summary: Using experimental cross data and genome-wide identity-by-descent (IBD) relationships, this study finds a significant decrease in offspring survival probability with increasing parental IBD sharing in an outbred marine nine-spined stickleback population, indicating substantial inbreeding load. Interestingly, a positive effect of paternal inbreeding coefficient on offspring survival suggests that certain combinations of parental inbreeding and genetic relatedness among mates may promote offspring survival. These results demonstrate the potential for inbreeding depression in outbred populations and highlight the importance of considering fine-scale genetic relatedness in future studies.
Article
Fisheries
Jiafeng Fang, Qi Li
Summary: Inbreeding reduces gonadal development and reproductive capacity in Pacific oysters. Maternal inbreeding decreases reproductive effort and hatching rate, while paternal inbreeding decreases sperm longevity, curvilinear velocity, and competitiveness. These results provide evidence of inbreeding depression in the reproductive traits of C. gigas.
Article
Fisheries
Shangyu Zhai, Ben Yang, Fuqiang Zhang, Qi Li, Shikai Liu
Summary: The Pacific oyster showed high phenotypic variation in resistance to Vibrio alginolyticus infection, with low to moderate heritability estimates for resistance. High correlation coefficients among family estimated breeding values suggest consistent predictive ability of different models for family EBVs. The low genetic and phenotypic correlation with growth traits indicate the feasibility of simultaneous genetic improvement in both growth and resistance traits.
Article
Environmental Sciences
Xinxing Wang, Ao Li, Wei Wang, Guofan Zhang, Li Li
Summary: The study on Pacific oysters reveals that environmental changes can induce phenotypic and epigenetic variations through DNA methylation, which can be inherited to the next generation. The cross-generational genes involved in regulating specific activities play a role in mediating inheritable phenotypic divergence related to heat stress resistance between intertidal and subtidal oysters. This study provides new insights into the epigenetic mechanisms underlying biological adaptations to rapid climate change in coastal organisms.
ENVIRONMENTAL RESEARCH
(2021)
Article
Fisheries
Haikun Li, Ruihai Yu, Qi Li
Summary: The building of superior tetraploid strains is crucial for the development of the oyster triploid industry. Inbred tetraploids with abnormal chromosome numbers are not suitable for further breeding. Inbreeding can occur in artificially induced tetraploid oysters, affecting their chromosome stability. A study comparing inbred and outbred tetraploids of Crassostera gigas found that continuous inbreeding leads to increased aneuploidy rates and decreased chromosome stability.
Article
Fisheries
Yongguo Li, Chengxun Xu, Qi Li
Summary: This study compared the adaptation of tetraploid and diploid larvae to salinity and temperature, and found that tetraploid larvae have lower survival rates and growth rates than diploid larvae. The study also determined that a salinity range of 25-30 psu and a temperature range of 23-28℃ are the most suitable conditions for culturing tetraploid larvae.
Article
Fisheries
Gaowei Jiang, Qi Li, Chengxun Xu
Summary: The development of two new types of triploid hybrids by inhibiting the polar body II has shown superior growth, survival, and gonad traits compared to diploid hybrids and purebred crosses. Triploid hybrids outperformed diploid hybrids in growth and survival across different culture environments, especially in summer, showing a positive yield advantage. The findings indicate that triploid hybrids have important application value for commercial oyster cultivation in northern China.
Article
Fisheries
Yongguo Li, Qi Li
Summary: The study developed tetraploid oysters using a new variety with rapid growth and black shell color and found that there was no significant difference in fertilization rate and survival rate between tetraploid and diploid offspring. However, tetraploid offspring had lower hatching rate and shell height, and lower survival rate in the larval stage. Nevertheless, all tetraploid offspring had black shell color, indicating the feasibility of establishing genomically stable tetraploid populations by selecting tetraploid parents.
Article
Environmental Sciences
Arno Bringer, Jerome Cachot, Emmanuel Dubillot, Gregoire Prunier, Valerie Huet, Christelle Clerandeau, Louise Evin, Helene Thomas
Summary: This study focused on the impacts of aged aquaculture microplastics (MPs) on Pacific oysters. The results showed that MPs had no significant effect on the growth of adult oysters, but significantly increased the mortality rate of bivalves exposed to MPs. In addition, ingestion of MPs in oyster tissues and the presence in biodeposits were observed. Furthermore, the study found that MPs had effects on the swimming behavior, development, and growth of the offspring of exposed oysters.
ENVIRONMENTAL POLLUTION
(2022)
Article
Fisheries
Joseph P. Dietrich, Mary Beth Rew Hicks, Jeffrey J. Hard, Krista M. Nichols, Christopher J. Langdon, Konstantin Divilov, Blaine Schoolfield, Mary R. Arkoosh
Summary: Marine bivalves account for 14% of global aquaculture production, with oysters representing about 33% of this production. Disease outbreaks caused by Vibrio coralliiyticus pose a major problem in oyster hatchery production. This study demonstrates that selective breeding can enhance the resistance of oyster larvae to Vibrio coralliiyticus, but multiple generations of breeding are expected for significant improvement.
Article
Fisheries
Yong Chi, Qi Li, Shikai Liu, Lingfeng Kong
Summary: This study examined the feasibility of improving survival of Pacific oysters through genetic selection. Selection for increasing spat survival was found to be feasible, and selecting to improve single growth trait will cause positive response in another growth traits in C. gigas. The study suggests that survival traits should be taken as the improving target of the next selection breeding programme.
AQUACULTURE RESEARCH
(2021)
Article
Engineering, Marine
Yiming Hu, Qi Li, Chengxun Xu, Shikai Liu, Lingfeng Kong, Hong Yu
Summary: This study investigated the differences in temperature and salinity tolerance between C. nippona and C. gigas spat and determined the optimal environmental conditions for the aquaculture of C. nippona spat. The results showed that C. nippona had lower survival rates than C. gigas under temperature changes and salinity decreases, but higher survival rates with increasing salinity. The findings suggest that particular attention should be paid to the inferior adaptability of C. nippona when farming outside their natural habitats.
JOURNAL OF MARINE SCIENCE AND ENGINEERING
(2023)
Article
Fisheries
Ziqiang Han, Qi Li
AQUACULTURE RESEARCH
(2018)
Article
Fisheries
Jingxiao Zhang, Qi Li, Chengxun Xu, Ziqiang Han
Article
Fisheries
Hongqiang Xu, Qi Li, Ziqiang Han, Shikai Liu, Hong Yu, Lingfeng Kong
Article
Fisheries
Ziqiang Han, Qi Li, Shikai Liu, Hong Yu, Lingfeng Kong
Article
Fisheries
Ziqiang Han, Qi Li
Article
Fisheries
Ziqiang Han, Qi Li, Chengxun Xu, Shikai Liu, Hong Yu, Lingfeng Kong
Summary: Genetic mechanism underlying shell coloration and sex determination in molluscan shellfish, particularly in the case of a novel orange-shell variant of C. gigas, was investigated in this study. A high-density genetic linkage map revealed significant QTLs associated with orange shell color and identified candidate genes related to shell organics. Additionally, a genome-wide significant sex-related QTL and sex-related genes were detected, providing valuable resources for further molecular mechanism investigations.
Article
Fisheries
Ziqiang Han, Qi Li, Shikai Liu, Lingfeng Kong
Article
Biotechnology & Applied Microbiology
Zhuanzhuan Li, Qi Li, Shikai Liu, Ziqiang Han, Lingfeng Kong, Hong Yu
Summary: In this study, high-throughput RNA sequencing was used to compare the expression profiles of coding and non-coding RNAs in Pacific oysters with orange and black shells. The analysis revealed that genes related to melanin synthesis and biomineralization were expressed higher in orange shell oysters, shedding light on the molecular regulation of shell coloration in marine shellfish.
MARINE BIOTECHNOLOGY
(2021)
Article
Oceanography
Han Ziqiang, Li Qi
Summary: The research findings suggest that there is no significant correlation between shell color and production traits in Crassostrea gigas. Therefore, shell color cannot be used as a marker for selecting growth and survival traits in oyster breeding programs, and these traits should be selected independently.
JOURNAL OF OCEAN UNIVERSITY OF CHINA
(2021)
Article
Oceanography
Han Ziqiang, Cong Rihao, Li Qi
Summary: The study revealed polymorphisms in the Ras gene and beta-glucosidase gene in Crassostrea gigas, identifying SNPs significantly associated with oyster growth traits. Multiple haplotypes were constructed, with specific haplotypes showing the highest growth performance in oysters. These results provide candidate markers for selecting fast-growing C. gigas.
JOURNAL OF OCEAN UNIVERSITY OF CHINA
(2021)
Article
Environmental Sciences
Ziqiang Han, Xiang Guo, Zuoliang Lu, Yiheng Song, Ruimin Chen, Xiaojie Han, Shiqi Yu, Kang Tu, Liangjie Liu, Huayong Que
Summary: Selecting precocious individuals to shorten the reproductive cycle has minimal effects on gonadal development and productive traits of Crassostrea angulata, except for the egg diameter where it does have a significant effect. This selection method may have a greater impact on females than males.
FRONTIERS IN MARINE SCIENCE
(2022)