An adhesin from hydrogen-utilizing rumen methanogen M ethanobrevibacter ruminantium  M1 binds a broad range of hydrogen-producing microorganisms

Phylogeny of Intestinal Ciliates, Including Charonina ventriculi, and Comparison of Microscopy and 18S rRNA Gene Pyrosequencing for Rumen Ciliate Community Structure Analysis

(2015) Sandra Kittelmann et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Considerations in the use of fluorescence in situ hybridization (FISH) and confocal laser scanning microscopy to characterize rumen methanogens and define their spatial distributions

(2015) Edith R. Valle et al.   CANADIAN JOURNAL OF MICROBIOLOGY

Influence of rumen protozoa on methane emission in ruminants: a meta-analysis approach

(2014) J. Guyader et al.   Animal

The Medium Is the Message: Interspecies and Interkingdom Signaling by Peptidoglycan and Related Bacterial Glycans

(2014) Jonathan Dworkin   Annual Review of Microbiology

Study of methanogen communities associated with different rumen protozoal populations

(2014) Alejandro Belanche et al.   FEMS MICROBIOLOGY ECOLOGY

SMART: recent updates, new developments and status in 2015

(2014) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

RIM-DB: a taxonomic framework for community structure analysis of methanogenic archaea from the rumen and other intestinal environments

(2014) Henning Seedorf et al.   PeerJ

Determining the culturability of the rumen bacterial microbiome

(2014) Christopher J. Creevey et al.   Microbial Biotechnology

Cooperative Degradation of Chitin by Extracellular and Cell Surface-Expressed Chitinases from Paenibacillus sp. Strain FPU-7

(2013) Takafumi Itoh et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Fluorescencein situhybridization probing of protozoalEntodiniumspp. and their methanogenic colonizers in the rumen of cattle fed alfalfa hay or triticale straw

(2013) Y. Xia et al.   JOURNAL OF APPLIED MICROBIOLOGY

Candidatus Methanogranum caenicola: a Novel Methanogen from the Anaerobic Digested Sludge, and Proposal of Methanomassiliicoccaceae fam. nov. and Methanomassiliicoccales ord. nov., for a Methanogenic Lineage of the Class Thermoplasmata

(2013) Takao Iino et al.   MICROBES AND ENVIRONMENTS

Simultaneous Amplicon Sequencing to Explore Co-Occurrence Patterns of Bacterial, Archaeal and Eukaryotic Microorganisms in Rumen Microbial Communities

(2013) Sandra Kittelmann et al.   PLoS One

The Complete Genome Sequence of Methanobrevibacter sp. AbM4

(2013) S. C. Leahy et al.   Standards in Genomic Sciences

“Methanoplasmatales,” Thermoplasmatales-Related Archaea in Termite Guts and Other Environments, Are the Seventh Order of Methanogens

(2012) Kristina Paul et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Structures of free-living and protozoa-associated methanogen communities in the bovine rumen differ according to comparative analysis of 16S rRNA and mcrA genes

(2012) L. D. Tymensen et al.   MICROBIOLOGY-SGM

Unique secreted-surface protein complex ofLactobacillus rhamnosus, identified by phage display

(2012) Dragana Gagic et al.   MicrobiologyOpen

Rumen protozoa and methanogenesis: not a simple cause–effect relationship

(2011) Diego P. Morgavi et al.   BRITISH JOURNAL OF NUTRITION

Flagella and pili are both necessary for efficient attachment of Methanococcus maripaludis to surfaces

(2011) Ken F. Jarrell et al.   FEMS MICROBIOLOGY LETTERS

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

InterPro in 2011: new developments in the family and domain prediction database

(2011) S. Hunter et al.   NUCLEIC ACIDS RESEARCH

The UCSC Archaeal Genome Browser: 2012 update

(2011) P. P. Chan et al.   NUCLEIC ACIDS RESEARCH

IMG: the integrated microbial genomes database and comparative analysis system

(2011) V. M. Markowitz et al.   NUCLEIC ACIDS RESEARCH

SMART 7: recent updates to the protein domain annotation resource

(2011) I. Letunic et al.   NUCLEIC ACIDS RESEARCH

Pan-genome of the dominant human gut-associated archaeon, Methanobrevibacter smithii, studied in twins

(2011) E. E. Hansen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Isolation of previously uncultured rumen bacteria by dilution to extinction using a new liquid culture medium

(2010) Nikki Kenters et al.   JOURNAL OF MICROBIOLOGICAL METHODS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Host interactions of probiotic bacterial surface molecules: comparison with commensals and pathogens

(2010) Sarah Lebeer et al.   NATURE REVIEWS MICROBIOLOGY

The Genome Sequence of the Rumen Methanogen Methanobrevibacter ruminantium Reveals New Possibilities for Controlling Ruminant Methane Emissions

(2010) Sinead C. Leahy et al.   PLoS One

Methane mitigation in ruminants: from microbe to the farm scale

(2009) C. Martin et al.   Animal

Plants, Mycorrhizal Fungi, and Bacteria: A Network of Interactions

(2009) Paola Bonfante et al.   Annual Review of Microbiology

Bacterial Adhesins in Host-Microbe Interactions

(2009) Kimberly A. Kline et al.   Cell Host & Microbe

New developments in microbial interspecies signaling

(2009) Elizabeth Anne Shank et al.   CURRENT OPINION IN MICROBIOLOGY

Next-Generation Phage Display: Integrating and Comparing Available Molecular Tools to Enable Cost-Effective High-Throughput Analysis

(2009) Emmanuel Dias-Neto et al.   PLoS One

Structure of the Archaeal Community of the Rumen

(2008) P. H. Janssen et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Unique aspects of the grass cell wall

(2008) J VOGEL   CURRENT OPINION IN PLANT BIOLOGY

The Mth60 fimbriae of Methanothermobacter thermoautotrophicus are functional adhesins

(2008) Christine Thoma et al.   ENVIRONMENTAL MICROBIOLOGY

Methanogenic archaea: ecologically relevant differences in energy conservation

(2008) Rudolf K. Thauer et al.   NATURE REVIEWS MICROBIOLOGY