Local computational methods to improve the interpretability and analysis of cryo-EM maps
出版年份 2021 全文链接
标题
Local computational methods to improve the interpretability and analysis of cryo-EM maps
作者
关键词
-
出版物
Nature Communications
Volume 12, Issue 1, Pages -
出版商
Springer Science and Business Media LLC
发表日期
2021-02-23
DOI
10.1038/s41467-021-21509-5
参考文献
相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。- Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation
- (2020) Daniel Wrapp et al. SCIENCE
- Measuring local-directional resolution and local anisotropy in cryo-EM maps
- (2020) Jose Luis Vilas et al. Nature Communications
- The inner junction complex of the cilia is an interaction hub that involves tubulin post-translational modifications
- (2020) Ahmad Abdelzaher Zaki Khalifa et al. eLife
- A Structure-Based Model for the Complete Transcription Cycle of Influenza Polymerase
- (2020) Joanna M. Wandzik et al. CELL
- Structure, Function, and Antigenicity of the SARS-CoV-2 Spike Glycoprotein
- (2020) Alexandra C. Walls et al. CELL
- Action of a minimal contractile bactericidal nanomachine
- (2020) Peng Ge et al. NATURE
- Alternative Conformations and Motions Adopted by 30S Ribosomal Subunits Visualized by Cryo-Electron Microscopy.
- (2020) Dushyant Jahagirdar et al. RNA
- Cryo-electron microscopy structures of ArnA, a key enzyme for polymyxin resistance, revealed unexpected oligomerizations and domain movements
- (2019) Meng Yang et al. JOURNAL OF STRUCTURAL BIOLOGY
- Role of Era in assembly and homeostasis of the ribosomal small subunit
- (2019) Aida Razi et al. NUCLEIC ACIDS RESEARCH
- A robust approach to ab initio cryo-electron microscopy initial volume determination
- (2019) J. Gomez-Blanco et al. JOURNAL OF STRUCTURAL BIOLOGY
- Tubulin lattice in cilia is in a stressed form regulated by microtubule inner proteins
- (2019) Muneyoshi Ichikawa et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix
- (2019) Dorothee Liebschner et al. Acta Crystallographica Section D-Structural Biology
- Cryo-EM structure of the complete and ligand-saturated insulin receptor ectodomain
- (2019) Theresia Gutmann et al. JOURNAL OF CELL BIOLOGY
- MonoRes: Automatic and Accurate Estimation of Local Resolution for Electron Microscopy Maps
- (2018) Jose Luis Vilas et al. STRUCTURE
- Automated map sharpening by maximization of detail and connectivity
- (2018) Thomas C. Terwilliger et al. Acta Crystallographica Section D-Structural Biology
- Real-space refinement in PHENIX for cryo-EM and crystallography
- (2018) Pavel V. Afonine et al. Acta Crystallographica Section D-Structural Biology
- New tools for the analysis and validation of cryo-EM maps and atomic models
- (2018) Pavel V. Afonine et al. Acta Crystallographica Section D-Structural Biology
- Structure of a pre-catalytic spliceosome
- (2017) Clemens Plaschka et al. NATURE
- Model-based local density sharpening of cryo-EM maps
- (2017) Arjen J Jakobi et al. eLife
- Modular Assembly of the Bacterial Large Ribosomal Subunit
- (2016) Joseph H. Davis et al. CELL
- EMPIAR: a public archive for raw electron microscopy image data
- (2016) Andrii Iudin et al. NATURE METHODS
- Accelerated cryo-EM structure determination with parallelisation using GPUs in RELION-2
- (2016) Dari Kimanius et al. eLife
- Semi-automated selection of cryo-EM particles in RELION-1.3
- (2015) Sjors H.W. Scheres JOURNAL OF STRUCTURAL BIOLOGY
- EMRinger: side chain–directed model and map validation for 3D cryo-electron microscopy
- (2015) Benjamin A Barad et al. NATURE METHODS
- Particle quality assessment and sorting for automatic and semiautomatic particle-picking techniques
- (2013) J. Vargas et al. JOURNAL OF STRUCTURAL BIOLOGY
- Quantifying the local resolution of cryo-EM density maps
- (2013) Alp Kucukelbir et al. NATURE METHODS
- Multiplicative phase-shifting interferometry using optical flow
- (2012) J. Vargas et al. APPLIED OPTICS
- Shack–Hartmann centroid detection using the spiral phase transform
- (2012) J. Vargas et al. APPLIED OPTICS
- FASTDEF: Fast defocus and astigmatism estimation for high-throughput transmission electron microscopy
- (2012) J. Vargas et al. JOURNAL OF STRUCTURAL BIOLOGY
- High dynamic range imaging method for interferometry
- (2011) J. Vargas et al. OPTICS COMMUNICATIONS
- Two-step interferometry by a regularized optical flow algorithm
- (2011) J. Vargas et al. OPTICS LETTERS
- EMDataBank.org: unified data resource for CryoEM
- (2010) C. L. Lawson et al. NUCLEIC ACIDS RESEARCH
- Definition and Estimation of Resolution in Single-Particle Reconstructions
- (2010) Hstau Y. Liao et al. STRUCTURE
- Sharpening high resolution information in single particle electron cryomicroscopy
- (2008) J.J. Fernández et al. JOURNAL OF STRUCTURAL BIOLOGY
Find the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
SearchCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now