The formation and evolution of centromeric satellite repeats in Saccharum species

Telomere-to-telomere assembly of a complete human X chromosome

(2020) Karen H. Miga et al.   NATURE

Sugarcane genome architecture decrypted with chromosome‐specific oligo probes

(2020) Nathalie Piperidis et al.   PLANT JOURNAL

Centromere Satellite Repeats Have Undergone Rapid Changes in Polyploid Wheat Subgenomes

(2019) Handong Su et al.   PLANT CELL

Characterization of repeat arrays in ultra‐long nanopore reads reveals frequent origin of satellite DNA from retrotransposon‐derived tandem repeats

(2019) Tihana Vondrak et al.   PLANT JOURNAL

Characterization of a Saccharum spontaneum with a basic chromosome number of x = 10 provides new insights on genome evolution in genus Saccharum

(2019) Zhuang Meng et al.   THEORETICAL AND APPLIED GENETICS

Amplification and adaptation of centromeric repeats in polyploid switchgrass species

(2018) Xueming Yang et al.   NEW PHYTOLOGIST

Centromeric DNA characterization in the model grass Brachypodium distachyon provides insights on the evolution of the genus

(2018) Yinjia Li et al.   PLANT JOURNAL

Discoveries of Extrachromosomal Circles of DNA in Normal and Tumor Cells

(2018) Teressa Paulsen et al.   TRENDS IN GENETICS

Centromere location in Arabidopsis is unaltered by extreme divergence in CENH3 protein sequence

(2017) Shamoni Maheshwari et al.   GENOME RESEARCH

TAREAN: a computational tool for identification and characterization of satellite DNA from unassembled short reads

(2017) Petr Novák et al.   NUCLEIC ACIDS RESEARCH

Genome-wide Mapping of the Nucleosome Landscape by Micrococcal Nuclease and Chemical Mapping

(2017) Lilien N. Voong et al.   TRENDS IN GENETICS

Isolation and characterization of centromeric repetitive DNA sequences in Saccharum spontaneum

(2017) Wenpan Zhang et al.   Scientific Reports

Rapid proliferation and nucleolar organizer targeting centromeric retrotransposons in cotton

(2016) Jinlei Han et al.   PLANT JOURNAL

Extrachromosomal circular DNA is common in yeast

(2015) Henrik D. Møller et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Centromere identity from the DNA point of view

(2014) Miroslav Plohl et al.   CHROMOSOMA

Boom-Bust Turnovers of Megabase-Sized Centromeric DNA in Solanum Species: Rapid Evolution of DNA Sequences Associated with Centromeres

(2014) H. Zhang et al.   PLANT CELL

RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads

(2013) P. Novak et al.   BIOINFORMATICS

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

Tandem repeats derived from centromeric retrotransposons

(2013) Anupma Sharma et al.   BMC GENOMICS

The octamer is the major form of CENP-A nucleosomes at human centromeres

(2013) Dan Hasson et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Systematic Application of DNA Fiber-FISH Technique in Cotton

(2013) Kai Wang et al.   PLoS One

The CentO satellite confers translational and rotational phasing on cenH3 nucleosomes in rice centromeres

(2013) T. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution

(2013) Daniël P Melters et al.   GENOME BIOLOGY

Unipro UGENE: a unified bioinformatics toolkit

(2012) Konstantin Okonechnikov et al.   BIOINFORMATICS

Repeatless and Repeat-Based Centromeres in Potato: Implications for Centromere Evolution

(2012) Z. Gong et al.   PLANT CELL

Extrachromosomal MicroDNAs and Chromosomal Microdeletions in Normal Tissues

(2012) Y. Shibata et al.   SCIENCE

Adaptation to diverse nitrogen-limited environments by deletion or extrachromosomal element formation of the GAP1 locus

(2010) D. Gresham et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Extrachromosomal circles of satellite repeats and 5S ribosomal DNA in human cells

(2010) Sarit Cohen et al.   Mobile DNA

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Major Evolutionary Transitions in Centromere Complexity

(2009) Harmit S. Malik et al.   CELL

Extrachromosomal Circular DNA in Eukaryotes: Possible Involvement in the Plasticity of Tandem Repeats

(2009) S. Cohen et al.   CYTOGENETIC AND GENOME RESEARCH

Epigenetic regulation of centromeric chromatin: old dogs, new tricks?

(2008) Robin C. Allshire et al.   NATURE REVIEWS GENETICS