Identification of novel metabolic engineering targets for S-adenosyl-L-Methionine production in Saccharomyces cerevisiae via genome-scale engineering

Unlocking nature’s biosynthetic potential by directed genome evolution

(2020) Mingfeng Cao et al.   CURRENT OPINION IN BIOTECHNOLOGY

Efficient production of S ‐adenosyl‐ l ‐methionine from dl ‐methionine in metabolic engineered Saccharomyces cerevisiae

(2019) Wei Liu et al.   BIOTECHNOLOGY AND BIOENGINEERING

Supply of Methionine During Late-Pregnancy Alters Fecal Microbiota and Metabolome in Neonatal Dairy Calves Without Changes in Daily Feed Intake

(2019) Ahmed Elolimy et al.   Frontiers in Microbiology

Multi-functional genome-wide CRISPR system for high throughput genotype–phenotype mapping

(2019) Jiazhang Lian et al.   Nature Communications

Engineered CRISPR/Cas9 system for multiplex genome engineering of polyploid industrial yeast strains

(2018) Jiazhang Lian et al.   BIOTECHNOLOGY AND BIOENGINEERING

Recent advances in metabolic engineering of Saccharomyces cerevisiae : New tools and their applications

(2018) Jiazhang Lian et al.   METABOLIC ENGINEERING

Genome-scale engineering of Saccharomyces cerevisiae with single-nucleotide precision

(2018) Zehua Bao et al.   NATURE BIOTECHNOLOGY

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update

(2018) Enis Afgan et al.   NUCLEIC ACIDS RESEARCH

Combinatorial metabolic engineering using an orthogonal tri-functional CRISPR system

(2017) Jiazhang Lian et al.   Nature Communications

The Improvement of SAM Accumulation by Integrating the Endogenous Methionine Adenosyltransferase Gene SAM2 in Genome of the Industrial Saccharomyces cerevisiae Strain

(2016) Weijun Zhao et al.   APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY

Construction of plasmids with tunable copy numbers in Saccharomyces cerevisiae and their applications in pathway optimization and multiplex genome integration

(2016) Jiazhang Lian et al.   BIOTECHNOLOGY AND BIOENGINEERING

Enrichr: a comprehensive gene set enrichment analysis web server 2016 update

(2016) Maxim V. Kuleshov et al.   NUCLEIC ACIDS RESEARCH

Rapid prototyping of microbial cell factories via genome-scale engineering

(2015) Tong Si et al.   BIOTECHNOLOGY ADVANCES

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Genome-wide RNAi screen reveals the E3 SUMO-protein ligase gene SIZ1 as a novel determinant of furfural tolerance in Saccharomyces cerevisiae

(2014) Han Xiao et al.   Biotechnology for Biofuels

Phosphatase Complex Pph3/Psy2 Is Involved in Regulation of Efficient Non-Homologous End-Joining Pathway in the Yeast Saccharomyces cerevisiae

(2014) Katayoun Omidi et al.   PLoS One

RNAi-Assisted Genome Evolution in Saccharomyces cerevisiae for Complex Phenotype Engineering

(2014) Tong Si et al.   ACS Synthetic Biology

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

Synthetic Gene Circuit-Mediated Monitoring of Endogenous Metabolites: Identification of GAL11 as a Novel Multicopy Enhancer of S-Adenosylmethionine Level in Yeast

(2013) Taichi Umeyama et al.   ACS Synthetic Biology

Enhanced co-production of S-adenosylmethionine and glutathione by an ATP-oriented amino acid addition strategy

(2011) Yulei Wang et al.   BIORESOURCE TECHNOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

RNAi in Budding Yeast

(2009) I. A. Drinnenberg et al.   SCIENCE