Sneathia vaginalis sp. nov. (Fusobacteriales, Leptotrichiaceae) as a replacement of the species ‘Sneathia amnii’ Harwich et al. 2012 and ‘Leptotrichia amnionii’ Shukla et al. 2002, and emended description of Sneathia Collins et al. 2001

Identification of a cytopathogenic toxin from Sneathia amnii

(2020) Gabriella L. Gentile et al.   JOURNAL OF BACTERIOLOGY

ResFinder 4.0 for predictions of phenotypes from genotypes

(2020) Valeria Bortolaia et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

OrthoVenn2: a web server for whole-genome comparison and annotation of orthologous clusters across multiple species

(2019) Ling Xu et al.   NUCLEIC ACIDS RESEARCH

The synergistic effect of concatenation in phylogenomics: the case in Pantoea

(2019) Marike Palmer et al.   PeerJ

Reliable differentiation of a non-toxigenic tox gene-bearing Corynebacterium ulcerans variant frequently isolated from game animals using MALDI-TOF MS

(2019) Jörg Rau et al.   VETERINARY MICROBIOLOGY

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets

(2017) Claire Bertelli et al.   NUCLEIC ACIDS RESEARCH

Microbiomic differences in tumor and paired-normal tissue in head and neck squamous cell carcinomas

(2017) Hannah Wang et al.   Genome Medicine

The Influence of Different Maternal Microbial Communities on the Development of Infant Gut and Oral Microbiota

(2017) Tiina Drell et al.   Scientific Reports

Phylogenetic and comparative genomics of the family Leptotrichiaceae and introduction of a novel fingerprinting MLVA for Streptobacillus moniliformis

(2016) Tobias Eisenberg et al.   BMC GENOMICS

Streptobacillus ratti sp. nov., isolated from a black rat (Rattus rattus)

(2016) Tobias Eisenberg et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

EDGAR 2.0: an enhanced software platform for comparative gene content analyses

(2016) Jochen Blom et al.   NUCLEIC ACIDS RESEARCH

PHASTER: a better, faster version of the PHAST phage search tool

(2016) David Arndt et al.   NUCLEIC ACIDS RESEARCH

Identification of novel microbes associated with pelvic inflammatory disease and infertility

(2016) Catherine L Haggerty et al.   SEXUALLY TRANSMITTED INFECTIONS

Approved and novel strategies in diagnostics of rat bite fever and otherStreptobacillusinfections in humans and animals

(2016) Tobias Eisenberg et al.   Virulence

Pyrosequencing Unveils Cystic Fibrosis Lung Microbiome Differences Associated with a Severe Lung Function Decline

(2016) Giovanni Bacci et al.   PLoS One

Uterine Microbiota Progression from Calving until Establishment of Metritis in Dairy Cows

(2015) Soo Jin Jeon et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

International Code of Nomenclature of Prokaryotes

(2015) Charles T Parker et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Cervical Microbiota in Women with Preterm Prelabor Rupture of Membranes

(2015) Marian Kacerovsky et al.   PLoS One

Phenotypic and Genotypic Characteristics of Members of the Genus Streptobacillus

(2015) Tobias Eisenberg et al.   PLoS One

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Genome sequence-based species delimitation with confidence intervals and improved distance functions

(2013) Jan P Meier-Kolthoff et al.   BMC BIOINFORMATICS

Longitudinal Assessment of Pigtailed Macaque Lower Genital Tract Microbiota by Pyrosequencing Reveals Dissimilarity to the Genital Microbiota of Healthy Humans

(2012) Gregory T. Spear et al.   AIDS RESEARCH AND HUMAN RETROVIRUSES

Genomic sequence analysis and characterization of Sneathia amnii sp. nov

(2012) Michael D Harwich et al.   BMC GENOMICS

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Extravaginal Reservoirs of Vaginal Bacteria as Risk Factors for Incident Bacterial Vaginosis

(2012) Jeanne M. Marrazzo et al.   JOURNAL OF INFECTIOUS DISEASES

Investigation of postpartum dairy cows’ uterine microbial diversity using metagenomic pyrosequencing of the 16S rRNA gene

(2012) V.S. Machado et al.   VETERINARY MICROBIOLOGY

Septic arthritis due to a Sneathia species most closely related to Sneathia sanguinegens

(2011) B. Bachy et al.   JOURNAL OF MEDICAL MICROBIOLOGY

Identification of Rhesus Macaque Genital Microbiota by 16S Pyrosequencing Shows Similarities to Human Bacterial Vaginosis: Implications for Use as an Animal Model for HIV Vaginal Infection

(2010) Gregory T. Spear et al.   AIDS RESEARCH AND HUMAN RETROVIRUSES

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Shifting the genomic gold standard for the prokaryotic species definition

(2009) Michael Richter et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Uncultivated Bacteria as Etiologic Agents of Intra-Amniotic Inflammation Leading to Preterm Birth

(2008) Y. W. Han et al.   JOURNAL OF CLINICAL MICROBIOLOGY