Article
Biochemistry & Molecular Biology
Jianmin Si, Chris van den Haute, Evy Lobbestael, Shaun Martin, Sarah van Veen, Peter Vangheluwe, Veerle Baekelandt
Summary: ATP13A2 loss impairs lysosomal membrane integrity and induces alpha-synuclein multimerization, while overexpression has a protective effect on alpha-synuclein by promoting ubiquitin-proteasome system activity and reducing alpha syn membrane association. Additionally, ATP13A2 promotes the secretion of alpha-synuclein through nanovesicles, suggesting a regulatory function independent of ATPase and transport activity.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2021)
Letter
Clinical Neurology
Aravind Ganesh, Steven Galetta
Summary: The study found lower total alpha-synuclein levels in the CSF of PD patients with high sensitivity but low specificity compared to HCs. Alpha-synuclein immunoreactivity in skin and submandibular gland was specific for PD but not sensitive. There are ongoing debates and uncertainties in methodology surrounding the detection of synuclein in tissue samples.
Article
Neurosciences
Hao Gu, Xiuli Yang, Xiaobo Mao, Enquan Xu, Chen Qi, Haibo Wang, Saurav Brahmachari, Bethany York, Manjari Sriparna, Amanda Li, Michael Chang, Pavan Patel, Valina L. Dawson, Ted M. Dawson
Summary: The depletion of Lag3 in transgenic mice carrying human alpha-syn A53T mutation significantly reduces insoluble alpha-syn aggregates, delays disease progression, improves behavioral deficits, and prolongs survival, indicating the contribution of Lag3 to the pathogenesis in this model.
FRONTIERS IN CELLULAR NEUROSCIENCE
(2021)
Article
Biochemistry & Molecular Biology
Zohra Rahmani, Satya Surabhi, Francisca Rojo-Cortes, Amina Dulac, Andreas Jenny, Serge Birman
Summary: The lack of Lamp1 in fruit flies increases susceptibility to oxidative stress and neurotoxicity caused by alpha-synuclein, suggesting a protective role of Lamp1 in Parkinson's disease models. Lamp1 promotes the formation of non-pathogenic aggregates, neutralizing the toxicity of alpha-synuclein.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
(2022)
Article
Medicine, Research & Experimental
Sean Chia, Z. Faidon Brotzakis, Robert I. Horne, Andrea Possenti, Benedetta Mannini, Rodrigo Cataldi, Magdalena Nowinska, Roxine Staats, Sara Linse, Tuomas P. J. Knowles, Johnny Habchi, Michele Vendruscolo
Summary: This study presents a structure-based approach to discover small molecules that inhibit the aggregation of alpha-synuclein by specifically targeting the surface-catalyzed secondary nucleation step. The identified small molecules are able to bind to the amyloid fibrils and prevent the formation of alpha-synuclein oligomers. The combination of structure-based and kinetic-based drug discovery methods has proven effective in selectively inhibiting the autocatalytic proliferation of alpha-synuclein aggregates.
MOLECULAR PHARMACEUTICS
(2022)
Article
Biochemistry & Molecular Biology
Emilio Fernandez-Espejo, Fernando Rodriguez de Fonseca, Juan Suarez, Eduardo Tolosa, Dolores Vilas, Iban Aldecoa, Joan Berenguer, Fatima Damas-Hermoso
Summary: This study found that the concentrations of native alpha-synuclein and nitrated proteins in the saliva of patients with idiopathic Parkinson's disease (IPD) are similar to those in the control group, with no correlation with clinical features. Additionally, Lewy-type inclusions expressing 3-nitrotyrosine-alpha-synuclein were observed in the submandibular glands of IPD patients but not controls, suggesting this could be a useful diagnostic technique for IPD.
Article
Cell Biology
Alice Prieto Huarcaya, Susy Drobny, Andre R. A. Marques, Alessandro Di Spiezio, Jan Philipp Dobert, Denise Balta, Christian Werner, Tania Rizo, Lisa Gallwitz, Simon Bub, Iva Stojkovska, Nandkishore R. Belur, Jens Fogh, Joseph R. Mazzulli, Wei Xiang, Amitkumar Fulzele, Mario Dejung, Markus Sauer, Beate Winner, Stefan Rose-John, Philipp Arnold, Paul Saftig, Friederike Zunke
Summary: This study suggests that enhancing SNCA degradation through the application of rHsCTSD can reduce SNCA aggregates in the brains of PD patients and restore endo-lysosome and autophagy function.
Article
Neurosciences
Alberto Delaidelli, Mette Richner, Lixiang Jiang, Amelia van der Laan, Ida Bergholdt Jul Christiansen, Nelson Ferreira, Jens R. Nyengaard, Christian B. Vaegter, Poul H. Jensen, Ian R. Mackenzie, Poul H. Sorensen, Asad Jan
Summary: The pathological accumulation of alpha-synuclein impairs redox homeostasis in the nervous system, leading to nuclear NRF2 accumulation and alterations in NRF2-responsive genes. Using a transgenic mouse model, it was observed that neuronal populations with phosphorylated aSyn showed increased nuclear NRF2 and abnormal anti-oxidant and inflammatory gene response in the affected neuraxis. Boosting neuronal anti-oxidant response may be a promising strategy to mitigate neurodegeneration in PD and related diseases.
ACTA NEUROPATHOLOGICA COMMUNICATIONS
(2021)
Review
Biochemistry & Molecular Biology
A. Anandhan, W. Chen, N. Nguyen, L. Madhavan, M. Dodson, D. D. Zhang
Summary: Parkinson's disease (PD) is a common neurodegenerative disorder characterized by the accumulation of alpha-synuclein and its negative effects on neuronal function and viability. This study demonstrates that loss of NRF2, a critical anti-ferroptotic mediator, increases markers of ferroptosis in PD-relevant brain regions. The increased ferroptosis is associated with age and genotype-dependent increase in alpha-syn pathology and behavioral deficits. The findings suggest targeting the vicious cycle of alpha-syn overexpression and NRF2 suppression as a potential means of preventing PD onset and progression.
FREE RADICAL BIOLOGY AND MEDICINE
(2022)
Article
Chemistry, Physical
Vinod Kumar Meena, Vijay Kumar, Shivani Karalia
Summary: The natural extract of Ocimum sanctum (OS) has been found to inhibit the aggregation of alpha-Synuclein (alpha-Syn), suggesting a potential therapeutic intervention against Parkinson's disease (PD) and other aggregation-related disorders. The study demonstrates the inhibitory and disaggregation effects of OS extract on alpha-Synuclein, as well as its protective effect on neuroblastoma cells against fibril-induced cytotoxicity. Docking studies also indicate the binding of OS extract with alpha-Synuclein, paving the way for further research on potential therapeutic strategies.
JOURNAL OF MOLECULAR LIQUIDS
(2021)
Review
Neurosciences
Juan Estaun-Panzano, Marie-Laure Arotcarena, Erwan Bezard
Summary: Synucleinopathies are a group of diseases characterized by the misfolding and aggregation of alpha-synuclein, leading to the formation of Lewy bodies. Studying the aggregation of alpha-synuclein is crucial for understanding these diseases, and recent breakthroughs have provided new insights into their mechanisms.
NEUROBIOLOGY OF DISEASE
(2023)
Article
Nanoscience & Nanotechnology
Dongtak Lee, Hyo Gi Jung, Dongsung Park, Junho Bang, Ji Hye Hong, Sang Won Lee, Seokbeom Roh, Jae Won Jang, Yonghwan Kim, Kyo Seon Hwang, Young-Sun Lee, Jae-Yong Park, In Duk Jung, Jeong Hoon Lee, Gyudo Lee, Dae Sung Yoon
Summary: We have developed a drug screening platform using amyloid-shelled gold nanocomplexes (ASGNs) to monitor the efficacy of alpha S-oligomer-degrading drugs. This platform mimics the in vivo generation process of pathological alpha S oligomers and has been tested using alpha S-degrading proteases and various small molecular substances with efficacy in PD treatment. Our results demonstrate that the ASGN-based in vitro platform has strong potential for discovering effective alpha S-oligomer-targeting drugs, thus reducing the attrition problem in drug discovery for PD treatment.
ACS APPLIED MATERIALS & INTERFACES
(2023)
Article
Chemistry, Analytical
Eleen Y. Shum, Janice H. Lai, Sixing Li, Haeun G. Lee, Jesse Soliman, Vedant K. Raol, Cavina K. Lee, Stephen P. A. Fodor, H. Christina Fan
Summary: UltraPCR is a next-generation dPCR system that enables single-molecule DNA counting with a swift and parallelized workflow. Each reaction is divided into over 30 million partitions, allowing for single-template occupancy, and the use of unique emulsion chemistry and three-dimensional imaging technique for rapid detection. This system has the potential for high precision, accuracy, and reproducibility, making it suitable for noninvasive prenatal screening.
ANALYTICAL CHEMISTRY
(2022)
Article
Cell Biology
Jifeng Zhao, Yun Li, Yan Li, Shi Xu, Tingting Tao, Ye Hua, Ji Zhang, Yi Fan
Summary: Research has shown that the activation of alpha 7-nAChRs can protect against cell damage induced by alpha Syn, suggesting a neuroprotective effect in Parkinson's disease. Studies on normal and alpha Syn transduced cells have revealed the role of alpha 7-nAChRs in promoting the clearance of alpha Syn and reducing its aggregation.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY
(2021)
Article
Radiology, Nuclear Medicine & Medical Imaging
Laura Kuebler, Sabrina Buss, Andrei Leonov, Sergey Ryazanov, Felix Schmidt, Andreas Maurer, Daniel Weckbecker, Anne M. Landau, Thea P. Lillethorup, Daniel Bleher, Ran Sing Saw, Bernd J. Pichler, Christian Griesinger, Armin Giese, Kristina Herfert
Summary: The newly developed MODAG-001 PET tracer based on anle138b showed high affinity in vitro and good penetration and stability in the mouse brain. However, no detectable binding to aggregated alpha SYN was found in human brain sections of LBD cases, possibly due to low abundance of aggregated alpha SYN against background protein.
EUROPEAN JOURNAL OF NUCLEAR MEDICINE AND MOLECULAR IMAGING
(2021)
Article
Cell Biology
Nicholas Ariotti, Yeping Wu, Satomi Okano, Yann Gambin, Jordan Follett, James Rae, Charles Ferguson, Rohan D. Teasdale, Kirill Alexandrov, Frederic A. Meunier, Michelle M. Hill, Robert G. Parton
Summary: CAV1 can be secreted in an inverted form from specific types of prostate cancer cells, and released through a non-canonical autophagy pathway, representing a novel class of exosomes.
Article
Biology
James Rae, Charles Ferguson, Nicholas Ariotti, Richard Webb, Han-Hao Cheng, James L. Mead, James D. Riches, Dominic Jb Hunter, Nick Martel, Joanne Baltos, Arthur Christopoulos, Nicole S. Bryce, Maria Lastra Cagigas, Sachini Fonseka, Marcel E. Sayre, Edna C. Hardeman, Peter W. Gunning, Yann Gambin, Thomas E. Hall, Robert G. Parton
Summary: The APEX-Gold method is a highly sensitive genetic tagging technique for electron microscopy, allowing clear detection and quantification of membrane proteins, cytoplasmic proteins, and cytoskeletal proteins.
Article
Multidisciplinary Sciences
Bjoern Meyer, Jeanne Chiaravalli, Stacy Gellenoncourt, Philip Brownridge, Dominic P. Bryne, Leonard A. Daly, Arturas Grauslys, Marius Walter, Fabrice Agou, Lisa A. Chakrabarti, Charles S. Craik, Claire E. Eyers, Patrick A. Eyers, Yann Gambin, Andrew R. Jones, Emma Sierecki, Eric Verdin, Marco Vignuzzi, Edward Emmott
Summary: The study investigated the proteolytic cleavage profile of viral and cellular proteins in SARS-CoV-2 replication using mass spectrometry, identifying previously unknown cleavage sites in viral proteins and potential substrates of main and papain-like proteases. siRNA depletion of certain cellular proteins inhibited SARS-CoV-2 replication, and drugs targeting specific proteins showed a dose-dependent reduction in virus titres, providing insights for developing targeted strategies to inhibit SARS-CoV-2 and treat COVID-19.
NATURE COMMUNICATIONS
(2021)
Article
Biology
Kerrie-Ann Mcmahon, David A. Stroud, Yann Gambin, Vikas Tillu, Michele Bastiani, Emma Sierecki, Mark E. Polinkovsky, Thomas E. Hall, Guillermo A. Gomez, Yeping Wu, Marie-Odile Parat, Nick Martel, Harriet P. Lo, Kum Kum Khanna, Kirill Alexandrov, Roger Daly, Alpha Yap, Michael T. Ryan, Robert G. Parton
Summary: Cavin3 plays a key role in DNA repair and interacts directly with BRCA1. Loss of cavin3 can increase the sensitivity of tumor cells to UV-induced apoptosis, while also affecting DNA repair and cell survival.
Article
Biology
Andre D. G. Leitao, Paulina Rudolffi-Soto, Alexandre Chappard, Akshay Bhumkar, Derrick Lau, Dominic J. B. Hunter, Yann Gambin, Emma Sierecki
Summary: The study presents a method to measure interactions of different forms of alpha-synuclein with 65 proteins, revealing the sequence of protein-binding events that lead to alpha-synuclein aggregation and providing potential targets for the treatment of synucleinopathies.
COMMUNICATIONS BIOLOGY
(2021)
Article
Biochemistry & Molecular Biology
Alex J. McCann, Jieqiong Lou, Mehdi Moustaqil, Matthew S. Graus, Ailisa Blum, Frank Fontaine, Hui Liu, Winnie Luu, Paulina Rudolffi-Soto, Peter Koopman, Emma Sierecki, Yann Gambin, Frederic A. Meunier, Zhe Liu, Elizabeth Hinde, Mathias Francois
Summary: The study reveals that the mutant SOX18(RaOp) disrupts the system through molecular interferences, impairing the functions of wild-type SOX18 protein, and amplifying the dominant-negative effect by poisoning the interactome of its wild-type counterpart.
NUCLEIC ACIDS RESEARCH
(2021)
Article
Biochemistry & Molecular Biology
Derrick Lau, Chloe Magnan, Kathryn Hill, Antony Cooper, Yann Gambin, Emma Sierecki
Summary: Quantifying alpha-synuclein aggregates has become a promising biomarker for synucleinopathies. However, determining the specific species responsible for amplification in seeding assays remains challenging. Through single molecule spectroscopy, we found that oligomers and preformed fibrils have different seeding behaviors in amplification assays, suggesting that even a low number of preformed fibrils may dominate the response.
ACS CHEMICAL NEUROSCIENCE
(2022)
Article
Biochemistry & Molecular Biology
Sunnie M. Yoh, Joao Mamede, Derrick Lau, Narae Ahn, Maria T. Sanchez-Aparicio, Joshua Temple, Andrew Tuckwell, Nina Fuchs, Gianguido C. Cianci, Laura Riva, Heather Curry, Xin Yin, Stephanie Gambut, Lacy M. Simons, Judd F. Hultquist, Renate Koenig, Yong Xiong, Adolfo Garcia-Sastre, Till Bocking, Thomas J. Hope, Sumit K. Chanda
Summary: This study reveals a two-factor authentication strategy by the innate surveillance machinery to selectively respond to low concentration of HIV-1 DNA, using the decoration of PQBP1 on the viral capsid and the recruitment of cGAS.
Article
Biochemistry & Molecular Biology
Max O. D. G. Baker, Nirukshan Shanmugam, Chi L. L. Pham, Sarah R. Ball, Emma Sierecki, Yann Gambin, Megan Steain, Margaret Sunde
Summary: TIR-domain-containing adapter-inducing interferon-beta (TRIF) is an innate immune protein that acts as an adaptor in the context of infection. TRIF can activate the programmed cell death pathway necroptosis, and its RHIM sequence plays a role in the formation of amyloid fibrils. The interactions between RHIMs of TRIF, RIPK1, and RIPK3 are involved in the signaling of necroptosis.
Article
Biochemistry & Molecular Biology
Ivy K. N. Chiang, Matthew S. Graus, Nils Kirschnick, Tara Davidson, Winnie Luu, Richard Harwood, Keyi Jiang, Bitong Li, Yew Yan Wong, Mehdi Moustaqil, Emmanuelle Lesieur, Renae Skoczylas, Valerie Kouskoff, Jan Kazenwadel, Luis Arriola-Martinez, Emma Sierecki, Yann Gambin, Kari Alitalo, Friedmann Kiefer, Natasha L. Harvey, Mathias Francois
Summary: SOX7, a BEC-specific transcription factor, modulates the expression level of angiocrine signals in blood vascular endothelial cells (BECs) to pattern lymphatic vessels. It directly represses the transcription of Vegfc, a major lymphangiogenic growth factor, and interacts with HEY1 to regulate Notch pathway. Our finding reveals the importance of SOX7 in modulating downstream signaling events crucial for lymphatic patterning.
Article
Biology
Derrick Lau, Chantal L. Marquez, Michael W. Parker, Till Bocking
Summary: This study provides a protocol for permeabilizing the membrane of HIV-1 particles using a pore-forming toxin for negative staining of capsids, which are stabilized with inositol hexakisphosphate to prevent premature capsid disassembly. This approach reveals the pleomorphic nature of capsids with a partially intact membrane surrounding them.